Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g10040 Brassica carinata HOM05D000589 ORTHO05D001885 3.3e-62 241.5 118 100.0
BcaB03g14285 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-12 76.6 34 97.1
BcaB06g26227 Brassica carinata HOM05D000589 ORTHO05D001885 6.4e-10 67.8 34 85.3
BcaC03g18339 Brassica carinata HOM05D000589 ORTHO05D001885 3.5e-08 62.0 34 73.5
BolC3t12574H Brassica oleracea HOM05D000589 ORTHO05D001885 7.9e-08 60.8 31 71.0
BraA02t07685Z Brassica rapa HOM05D000589 ORTHO05D001885 7.9e-08 60.8 31 71.0
BcaB02g09875 Brassica carinata HOM05D000589 ORTHO05D001885 1.0e-07 60.5 30 83.3
BcaC03g14470 Brassica carinata HOM05D000589 ORTHO05D001885 1.0e-07 60.5 35 77.1
BcaB01g02011 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-07 60.1 33 78.8
BcaB04g20296 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-07 60.1 33 78.8
BcaB01g01446 Brassica carinata HOM05D000589 ORTHO05D001885 1.8e-07 59.7 33 78.8
BcaB01g02139 Brassica carinata HOM05D000589 ORTHO05D001885 1.8e-07 59.7 33 78.8
BcaB01g05554 Brassica carinata HOM05D000589 ORTHO05D001885 1.8e-07 59.7 36 77.8
BcaC05g28209 Brassica carinata HOM05D000589 ORTHO05D001885 1.8e-07 59.7 35 77.1
BcaC05g28962 Brassica carinata HOM05D000589 ORTHO05D001885 1.8e-07 59.7 36 77.8
BolC4t25855H Brassica oleracea HOM05D000589 ORTHO05D001885 1.8e-07 59.7 36 77.8
BcaB01g04884 Brassica carinata HOM05D000589 ORTHO05D001885 3.0e-07 58.9 29 82.8
BcaC01g00898 Brassica carinata HOM05D000589 ORTHO05D001885 3.0e-07 58.9 31 80.6
BcaC01g05797 Brassica carinata HOM05D000589 ORTHO05D001885 3.0e-07 58.9 37 67.6
BcaC04g18907 Brassica carinata HOM05D000589 ORTHO05D001885 3.0e-07 58.9 36 75.0
BcaC06g35166 Brassica carinata HOM05D000589 ORTHO05D001885 3.0e-07 58.9 31 80.6
BolC6t37491H Brassica oleracea HOM05D000589 ORTHO05D001885 3.0e-07 58.9 39 66.7
BolC7t42427H Brassica oleracea HOM05D000589 ORTHO05D001885 3.0e-07 58.9 31 80.6
BolC8t48988H Brassica oleracea HOM05D000589 ORTHO05D001885 3.0e-07 58.9 31 80.6
BraA03t14502Z Brassica rapa HOM05D000589 ORTHO05D001885 3.0e-07 58.9 29 79.3
BraA08t32605Z Brassica rapa HOM05D000589 ORTHO05D001885 3.0e-07 58.9 39 66.7
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 3.0e-07 58.9 39 66.7
BcaC02g08929 Brassica carinata HOM05D000589 ORTHO05D001885 3.9e-07 58.5 38 71.1
BcaC03g15024 Brassica carinata HOM05D000589 ORTHO05D001885 3.9e-07 58.5 26 92.3
BcaC04g22653 Brassica carinata HOM05D000589 ORTHO05D016749 3.9e-07 58.5 36 75.0
BcaC05g25870 Brassica carinata HOM05D000589 ORTHO05D001885 3.9e-07 58.5 33 78.8
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 3.9e-07 58.5 29 79.3
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 3.9e-07 58.5 29 79.3
C03p80460 Brassica napus HOM05D000589 ORTHO05D001885 3.9e-07 58.5 29 79.3
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 3.9e-07 58.5 29 79.3
BolC3t17893H Brassica oleracea HOM05D000589 ORTHO05D000401 3.9e-07 58.5 31 67.7
BolC6t38706H Brassica oleracea HOM05D000589 ORTHO05D001885 3.9e-07 58.5 29 79.3
BolC9t54652H Brassica oleracea HOM05D000589 ORTHO05D001885 3.9e-07 58.5 29 79.3
BolC9t57315H Brassica oleracea HOM05D000589 ORTHO05D001885 3.9e-07 58.5 29 79.3
BraA01t03046Z Brassica rapa HOM05D000589 ORTHO05D001885 3.9e-07 58.5 29 79.3
BraA07t28350Z Brassica rapa HOM05D000589 ORTHO05D001885 3.9e-07 58.5 29 79.3
BraA08t32950Z Brassica rapa HOM05D000589 ORTHO05D001885 3.9e-07 58.5 37 70.3
BraA09t40146Z Brassica rapa HOM05D000589 ORTHO05D001885 3.9e-07 58.5 29 79.3
BcaC06g33599 Brassica carinata HOM05D000589 ORTHO05D001885 5.1e-07 58.2 36 72.2
BcaC04g21586 Brassica carinata HOM05D000589 ORTHO05D001885 6.7e-07 57.8 53 58.5
BcaC04g22612 Brassica carinata HOM05D000589 ORTHO05D001885 6.7e-07 57.8 32 75.0
BolC1t04845H Brassica oleracea HOM05D000589 ORTHO05D001885 6.7e-07 57.8 31 67.7
BolC3t19856H Brassica oleracea HOM05D000589 ORTHO05D000401 6.7e-07 57.8 31 67.7
BolC6t35247H Brassica oleracea HOM05D000589 ORTHO05D001885 6.7e-07 57.8 30 80.0
BcaB02g07028 Brassica carinata HOM05D000589 ORTHO05D001885 8.7e-07 57.4 29 79.3
BcaC02g11767 Brassica carinata HOM05D000589 ORTHO05D001885 8.7e-07 57.4 29 82.8
BcaC05g25264 Brassica carinata HOM05D000589 ORTHO05D001885 8.7e-07 57.4 29 82.8
BcaC08g45829 Brassica carinata HOM05D000589 ORTHO05D001885 8.7e-07 57.4 29 82.8
C01p30550 Brassica napus HOM05D000589 ORTHO05D001885 8.7e-07 57.4 29 79.3
BraA09t38531Z Brassica rapa HOM05D000589 ORTHO05D001885 8.7e-07 57.4 31 74.2
BcaB06g27723 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-06 57.0 31 71.0
BcaC01g00334 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-06 57.0 32 75.0
BcaC04g21787 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-06 57.0 32 75.0
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 1.1e-06 57.0 29 75.9
C08p03150 Brassica napus HOM05D000930 ORTHO05D000748 1.1e-06 57.0 29 79.3
BolC9t54041H Brassica oleracea HOM05D000589 ORTHO05D000401 1.1e-06 57.0 32 75.0
BolC9t55626H Brassica oleracea HOM05D000589 ORTHO05D001885 1.1e-06 57.0 32 75.0
BcaB04g18988 Brassica carinata HOM05D000589 ORTHO05D001885 1.5e-06 56.6 112 33.0
BcaB01g01311 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-06 56.2 28 78.6
BcaB01g01573 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-06 56.2 28 82.1
BcaB08g36271 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-06 56.2 28 82.1
BcaC02g08679 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-06 56.2 33 72.7
BcaC05g28348 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-06 56.2 28 82.1
BcaC06g33454 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-06 56.2 28 85.7
BcaC06g33723 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-06 56.2 28 82.1
BcaC06g34714 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-06 56.2 29 69.0
BcaC06g36688 Brassica carinata HOM05D001498 ORTHO05D001885 1.9e-06 56.2 29 75.9
BolC7t43826H Brassica oleracea HOM05D000589 ORTHO05D001885 1.9e-06 56.2 37 64.9
BcaB03g15329 Brassica carinata HOM05D000589 ORTHO05D001885 2.5e-06 55.8 33 66.7
BcaC04g22143 Brassica carinata HOM05D000589 ORTHO05D001885 2.5e-06 55.8 36 63.9
BolC2t10463H Brassica oleracea HOM05D000589 ORTHO05D000401 2.5e-06 55.8 31 74.2
BraA04t17042Z Brassica rapa HOM05D000589 ORTHO05D001885 2.5e-06 55.8 34 70.6
BcaC04g19792 Brassica carinata HOM05D000589 ORTHO05D001885 3.3e-06 55.5 33 75.8
BcaC06g35854 Brassica carinata HOM05D002078 ORTHO05D010191 3.3e-06 55.5 47 59.6
BcaC08g44374 Brassica carinata HOM05D001498 ORTHO05D008559 3.3e-06 55.5 29 75.9
BolC1t02335H Brassica oleracea HOM05D000589 ORTHO05D001885 3.3e-06 55.5 29 72.4
BolC8t48273H Brassica oleracea HOM05D000589 ORTHO05D001885 3.3e-06 55.5 36 66.7
BolC9t55020H Brassica oleracea HOM05D000589 ORTHO05D001885 3.3e-06 55.5 37 64.9
BcaC02g11766 Brassica carinata HOM05D000589 ORTHO05D001885 4.3e-06 55.1 34 67.6
BcaC04g22510 Brassica carinata HOM05D000589 ORTHO05D001885 4.3e-06 55.1 36 69.4
BcaC05g29003 Brassica carinata HOM05D000589 ORTHO05D001885 4.3e-06 55.1 24 91.7
BcaC07g38195 Brassica carinata HOM05D000589 ORTHO05D001885 4.3e-06 55.1 29 75.9
BcaC08g44546 Brassica carinata HOM05D000589 ORTHO05D001885 4.3e-06 55.1 33 72.7
BolC4t25125H Brassica oleracea HOM05D000589 ORTHO05D001885 4.3e-06 55.1 29 75.9
BolC4t25876H Brassica oleracea HOM05D000589 ORTHO05D001885 4.3e-06 55.1 29 75.9
BraA03t15289Z Brassica rapa HOM05D000589 ORTHO05D001885 4.3e-06 55.1 30 73.3
BcaB06g25421 Brassica carinata HOM05D000589 ORTHO05D001885 5.6e-06 54.7 28 78.6
BcaB06g27274 Brassica carinata HOM05D000589 ORTHO05D001885 5.6e-06 54.7 28 75.0
BcaC05g25328 Brassica carinata HOM05D000589 ORTHO05D001885 5.6e-06 54.7 27 81.5
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 5.6e-06 54.7 29 75.9
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 5.6e-06 54.7 28 75.0
BolC8t49419H Brassica oleracea HOM05D000589 ORTHO05D001885 5.6e-06 54.7 29 75.9
BraA02t07620Z Brassica rapa HOM05D000589 ORTHO05D001885 5.6e-06 54.7 28 78.6
BcaB04g20434 Brassica carinata HOM05D000589 ORTHO05D001885 7.4e-06 54.3 27 74.1
BcaB05g21802 Brassica carinata HOM05D000589 ORTHO05D001885 7.4e-06 54.3 23 95.7
BcaB07g32905 Brassica carinata HOM05D000589 ORTHO05D001885 7.4e-06 54.3 28 78.6
BcaC08g45585 Brassica carinata HOM05D000589 ORTHO05D001885 7.4e-06 54.3 26 84.6
BcaC08g46754 Brassica carinata HOM05D000589 ORTHO05D001885 7.4e-06 54.3 36 69.4
BcaB07g32349 Brassica carinata HOM05D000589 ORTHO05D001885 9.6e-06 53.9 35 65.7
BcaC02g12351 Brassica carinata HOM05D000589 ORTHO05D001885 9.6e-06 53.9 29 79.3
BcaC08g45577 Brassica carinata HOM05D000589 ORTHO05D001885 9.6e-06 53.9 34 67.6


User provided reference genes

Program Settings