Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g09987 Brassica carinata HOM05D011091 ORTHO05D013198 1.5e-43 179.1 91 100.0
BraA07t29437Z Brassica rapa HOM05D011091 ORTHO05D013198 3.9e-31 137.9 97 78.4
A07p17100 Brassica napus HOM05D011091 ORTHO05D013198 1.1e-30 136.3 97 77.3
C07p24960 Brassica napus HOM05D011091 ORTHO05D013198 2.5e-30 135.2 97 75.3
BolC7t43026H Brassica oleracea HOM05D011091 ORTHO05D013198 3.3e-30 134.8 97 77.3
BcaB07g29654 Brassica carinata HOM05D011091 ORTHO05D013198 1.5e-22 109.4 100 66.0
CARHR280880 Cardamine hirsuta HOM05D011091 ORTHO05D013198 1.5e-22 109.4 101 62.4
AL8G44630 Arabidopsis lyrata HOM05D011091 ORTHO05D013198 2.2e-21 105.5 102 59.8
A02p44390 Brassica napus HOM05D011091 ORTHO05D013198 2.2e-21 105.5 103 62.1
C02p64780 Brassica napus HOM05D011091 ORTHO05D013198 4.8e-21 104.4 103 60.2
BcaC03g18399 Brassica carinata HOM05D011091 ORTHO05D013198 8.2e-21 103.6 103 60.2
BolC2t12539H Brassica oleracea HOM05D011091 ORTHO05D013198 8.2e-21 103.6 103 60.2
Carub.0008s2769 Capsella rubella HOM05D011091 ORTHO05D013198 1.8e-20 102.4 98 63.3
Sp2g29860 Schrenkiella parvula HOM05D011091 ORTHO05D013198 3.1e-20 101.7 91 62.6
AT5G66815 Arabidopsis thaliana HOM05D011091 ORTHO05D013198 1.5e-19 99.4 102 60.8
BraA02t09356Z Brassica rapa HOM05D011091 ORTHO05D013198 2.2e-18 95.5 103 60.2
Thhalv10005488m.g Eutrema salsugineum HOM05D011091 ORTHO05D013198 4.6e-16 87.8 107 57.0
BcaC06g34751 Brassica carinata HOM05D011091 ORTHO05D013198 5.1e-15 84.3 64 76.6
Gohir.D03G020800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 5.5e-09 64.3 92 41.3
Gorai.003G022000 Gossypium raimondii HOM05D013202 ORTHO05D009966 5.5e-09 64.3 92 41.3
Gorai.003G022200 Gossypium raimondii HOM05D013202 ORTHO05D009966 5.5e-09 64.3 92 41.3
Gorai.003G022300 Gossypium raimondii HOM05D013202 ORTHO05D009966 1.2e-08 63.2 92 42.4
Gohir.A02G159700 Gossypium hirsutum HOM05D013202 ORTHO05D009966 1.6e-08 62.8 92 42.4
TPR.G745 Trifolium pratense HOM05D008581 ORTHO05D009966 2.7e-08 62.0 112 37.5
Gohir.A02G159800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 6.1e-08 60.8 92 39.1
Glyma.11G057100 Glycine max HOM05D008581 ORTHO05D011864 3.0e-07 58.5 92 39.1
arahy.Tifrunner.gnm1.ann1.HVX4VE Arachis hypogaea HOM05D010906 ORTHO05D011864 1.1e-06 56.6 91 37.4
COL.COLO4_11388 Corchorus olitorius HOM05D008581 ORTHO05D009966 2.0e-06 55.8 110 33.6
Gohir.D03G021000 Gossypium hirsutum HOM05D013202 ORTHO05D009966 3.3e-06 55.1 93 37.6
Phvul.003G245400 Phaseolus vulgaris HOM05D008581 ORTHO05D009966 3.3e-06 55.1 95 35.8
Psat4g087360 Pisum sativum HOM05D008581 ORTHO05D011864 3.3e-06 55.1 111 34.2
Glyma.01G185100 Glycine max HOM05D008581 ORTHO05D009966 4.4e-06 54.7 102 37.3
Gorai.003G022400 Gossypium raimondii HOM05D013202 ORTHO05D009966 5.7e-06 54.3 93 37.6


User provided reference genes

Program Settings