Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g09980 Brassica carinata HOM05D003435 ORTHO05D093422 3.4e-59 231.5 118 100.0
Aa31LG1G15390 Aethionema arabicum HOM05D003435 ORTHO05D004032 3.9e-15 85.1 113 51.3
Cpa.g.sc6.378 Carica papaya HOM05D003435 ORTHO05D004032 2.4e-12 75.9 112 44.6
CiPaw.01G021600 Carya illinoinensis HOM05D003435 ORTHO05D004032 2.4e-12 75.9 111 43.2
AL5G30740 Arabidopsis lyrata HOM05D003435 ORTHO05D004032 6.9e-12 74.3 112 49.1
Thhalv10010058m.g Eutrema salsugineum HOM05D003435 ORTHO05D004032 4.5e-11 71.6 112 47.3
QL06p042284 Quercus lobata HOM05D003435 ORTHO05D004032 7.6e-11 70.9 119 44.5
Aa31LG4G18760 Aethionema arabicum HOM05D003435 ORTHO05D004032 9.9e-11 70.5 115 47.0
THA.LOC104819223 Tarenaya hassleriana HOM05D003435 ORTHO05D004032 9.9e-11 70.5 113 46.0
AT3G50590 Arabidopsis thaliana HOM05D003435 ORTHO05D004032 1.9e-09 66.2 116 44.0
Prupe.7G136400 Prunus persica HOM05D003435 ORTHO05D004032 3.2e-09 65.5 117 39.3
Sp5g11620 Schrenkiella parvula HOM05D003435 ORTHO05D004032 4.2e-09 65.1 112 46.4
Haze_15428 Corylus avellana HOM05D003435 ORTHO05D004032 7.1e-09 64.3 118 43.2
Eucgr.F02662 Eucalyptus grandis HOM05D003435 ORTHO05D004032 9.3e-09 63.9 114 42.1
Manes.13G126200 Manihot esculenta HOM05D003435 ORTHO05D004032 2.1e-08 62.8 117 40.2
Ciclev10024690m.g Citrus clementina HOM05D003435 ORTHO05D004032 2.7e-08 62.4 117 40.2
Eucgr.F01659 Eucalyptus grandis HOM05D003435 ORTHO05D004032 2.7e-08 62.4 114 41.2
MD02G1168900 Malus domestica HOM05D003435 ORTHO05D004032 4.6e-08 61.6 117 40.2
Nitab4.5_0000961g0120 Nicotiana tabacum HOM05D003435 ORTHO05D004032 4.6e-08 61.6 113 38.1
CARHR160100 Cardamine hirsuta HOM05D003435 ORTHO05D004032 6.0e-08 61.2 108 47.2
Lalb_Chr09g0323051 Lupinus albus HOM05D003435 ORTHO05D004032 6.0e-08 61.2 108 42.6
MD15G1280900 Malus domestica HOM05D003435 ORTHO05D004032 7.9e-08 60.8 116 39.7
RcHm_v2.0_Chr2g0105001 Rosa chinensis HOM05D003435 ORTHO05D004032 1.8e-07 59.7 116 37.1
Sed0012547 Sechium edule HOM05D003435 ORTHO05D004032 1.8e-07 59.7 113 35.4
CsaV3_2G016800 Cucumis sativus L. HOM05D003435 ORTHO05D004032 3.0e-07 58.9 117 39.3
Cfa003996 Carpinus fangiana HOM05D003435 ORTHO05D004032 3.9e-07 58.5 118 41.5
Carub.0005s1691 Capsella rubella HOM05D003435 ORTHO05D004032 5.1e-07 58.2 115 42.6
CANSAT01G2969 Cannabis sativa HOM05D003435 ORTHO05D004032 6.7e-07 57.8 117 38.5
Migut.H00454 Erythranthe guttata HOM05D003435 ORTHO05D004032 8.7e-07 57.4 116 37.1
Nitab4.5_0000310g0180 Nicotiana tabacum HOM05D003435 ORTHO05D004032 1.5e-06 56.6 113 38.9
Nn1g05856 Nelumbo nucifera HOM05D003435 ORTHO05D004032 1.9e-06 56.2 114 37.7
COL.COLO4_11380 Corchorus olitorius HOM05D003435 ORTHO05D004032 2.5e-06 55.8 114 38.6
PGR119G1381 Punica granatum HOM05D003435 ORTHO05D004032 2.5e-06 55.8 115 37.4
Solyc02g090570.4 Solanum lycopersicum HOM05D003435 ORTHO05D004032 2.5e-06 55.8 114 35.1
Sopen02g035220 Solanum pennellii HOM05D003435 ORTHO05D004032 2.5e-06 55.8 114 35.1
Potri.005G136300 Populus trichocarpa HOM05D003435 ORTHO05D004032 4.3e-06 55.1 113 38.9
TWI53G0909 Tripterygium wilfordii HOM05D003435 ORTHO05D004032 4.3e-06 55.1 114 38.6
CAN.G836.66 Capsicum annuum HOM05D003435 ORTHO05D004032 5.6e-06 54.7 113 38.9
MSTRG.23766 Avicennia marina HOM05D003435 ORTHO05D004032 9.6e-06 53.9 117 36.8
Medtr8g079820 Medicago truncatula HOM05D003435 ORTHO05D004032 9.6e-06 53.9 111 38.7
Potri.007G041000 Populus trichocarpa HOM05D003435 ORTHO05D004032 9.6e-06 53.9 115 37.4


User provided reference genes

Program Settings