Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g09979 Brassica carinata HOM05D003435 ORTHO05D004032 8.2e-41 169.9 80 100.0
Cc07_g05840 Coffea canephora HOM05D003435 ORTHO05D004032 4.8e-25 117.5 76 73.7
Aa31LG1G15390 Aethionema arabicum HOM05D003435 ORTHO05D004032 6.3e-25 117.1 76 73.7
Cpa.g.sc6.378 Carica papaya HOM05D003435 ORTHO05D004032 8.2e-25 116.7 76 73.7
Phvul.003G245800 Phaseolus vulgaris HOM05D003435 ORTHO05D004032 1.4e-24 115.9 76 75.0
Carub.0005s1691 Capsella rubella HOM05D003435 ORTHO05D004032 1.8e-24 115.5 76 73.7
Glyma.05G090500 Glycine max HOM05D003435 ORTHO05D004032 1.8e-24 115.5 76 75.0
Potri.007G041000 Populus trichocarpa HOM05D003435 ORTHO05D004032 1.8e-24 115.5 76 73.7
VMungo0251G2411 Vigna mungo HOM05D003435 ORTHO05D004032 1.8e-24 115.5 76 75.0
Dinv39875 Davidia involucrata HOM05D003435 ORTHO05D004032 2.4e-24 115.2 76 73.7
Psat4g087800 Pisum sativum HOM05D003435 ORTHO05D004032 2.4e-24 115.2 76 72.4
TPR.G19005 Trifolium pratense HOM05D003435 ORTHO05D004032 2.4e-24 115.2 76 73.7
Glyma.17G176300 Glycine max HOM05D003435 ORTHO05D004032 3.1e-24 114.8 76 73.7
Lj4g0022564 Lotus japonicus HOM05D003435 ORTHO05D004032 3.1e-24 114.8 76 73.7
CARHR160100 Cardamine hirsuta HOM05D003435 ORTHO05D004032 4.1e-24 114.4 76 72.4
COL.COLO4_11380 Corchorus olitorius HOM05D003435 ORTHO05D004032 4.1e-24 114.4 76 72.4
Gohir.A12G070200 Gossypium hirsutum HOM05D003435 ORTHO05D004032 4.1e-24 114.4 76 72.4
Gohir.D11G197100 Gossypium hirsutum HOM05D003435 ORTHO05D004032 4.1e-24 114.4 76 72.4
Gohir.D12G088600 Gossypium hirsutum HOM05D003435 ORTHO05D004032 4.1e-24 114.4 76 72.4
Gorai.007G211000 Gossypium raimondii HOM05D003435 ORTHO05D004032 4.1e-24 114.4 76 72.4
Gorai.008G074500 Gossypium raimondii HOM05D003435 ORTHO05D004032 4.1e-24 114.4 76 72.4
Lj2g0013536 Lotus japonicus HOM05D003435 ORTHO05D004032 4.1e-24 114.4 83 67.5
Thecc.01G052400 Theobroma cacao HOM05D003435 ORTHO05D004032 4.1e-24 114.4 76 72.4
Atru.chr3.398 Acer truncatum HOM05D003435 ORTHO05D004032 5.3e-24 114.0 76 72.4
AL5G30740 Arabidopsis lyrata HOM05D003435 ORTHO05D004032 5.3e-24 114.0 73 75.3
AT3G50590 Arabidopsis thaliana HOM05D003435 ORTHO05D004032 5.3e-24 114.0 73 75.3
CiPaw.01G021600 Carya illinoinensis HOM05D003435 ORTHO05D004032 5.3e-24 114.0 76 72.4
Thhalv10010058m.g Eutrema salsugineum HOM05D003435 ORTHO05D004032 5.3e-24 114.0 73 75.3
FvH4_1g15690 Fragaria vesca HOM05D003435 ORTHO05D004032 5.3e-24 114.0 76 72.4
FAN19G0078 Fragaria x ananassa HOM05D003435 ORTHO05D004032 5.3e-24 114.0 76 72.4
FAN23G2700 Fragaria x ananassa HOM05D003435 ORTHO05D004032 5.3e-24 114.0 76 72.4
FAN26G2684 Fragaria x ananassa HOM05D003435 ORTHO05D004032 5.3e-24 114.0 76 72.4
FAN28G0748 Fragaria x ananassa HOM05D003435 ORTHO05D004032 5.3e-24 114.0 76 72.4
MD15G1280900 Malus domestica HOM05D003435 ORTHO05D004032 5.3e-24 114.0 76 72.4
Medtr8g079820 Medicago truncatula HOM05D003435 ORTHO05D004032 5.3e-24 114.0 73 75.3
Prupe.7G136400 Prunus persica HOM05D003435 ORTHO05D004032 5.3e-24 114.0 76 72.4
QL06p042284 Quercus lobata HOM05D003435 ORTHO05D004032 5.3e-24 114.0 76 72.4
RcHm_v2.0_Chr2g0105001 Rosa chinensis HOM05D003435 ORTHO05D004032 5.3e-24 114.0 76 72.4
Sp5g11620 Schrenkiella parvula HOM05D003435 ORTHO05D004032 5.3e-24 114.0 76 73.7
Ciclev10024690m.g Citrus clementina HOM05D003435 ORTHO05D004032 6.9e-24 113.6 76 71.1
Duzib147G1293 Durio zibethinus HOM05D003435 ORTHO05D004032 6.9e-24 113.6 76 71.1
CANSAT01G2969 Cannabis sativa HOM05D003435 ORTHO05D004032 9.1e-24 113.2 76 72.4
Ca_22188_v3 Cicer arietinum L. HOM05D003435 ORTHO05D004032 9.1e-24 113.2 76 72.4
PGR119G1381 Punica granatum HOM05D003435 ORTHO05D004032 9.1e-24 113.2 76 72.4
Actinidia16507 Actinidia chinensis HOM05D003435 ORTHO05D004032 1.2e-23 112.8 76 72.4
arahy.Tifrunner.gnm1.ann1.IHL9QQ Arachis hypogaea HOM05D003435 ORTHO05D004032 1.2e-23 112.8 83 67.5
Oeu049304.1 Olea europaea HOM05D003435 ORTHO05D004032 1.2e-23 112.8 76 71.1
BcaB01g00607 Brassica carinata HOM05D003435 ORTHO05D004032 1.5e-23 112.5 73 74.0
BcaC07g39520 Brassica carinata HOM05D003435 ORTHO05D004032 1.5e-23 112.5 73 74.0
A09p43620 Brassica napus HOM05D003435 ORTHO05D004032 1.5e-23 112.5 73 74.0
C08p25650 Brassica napus HOM05D003435 ORTHO05D004032 1.5e-23 112.5 73 74.0
BolC8t50184H Brassica oleracea HOM05D003435 ORTHO05D004032 1.5e-23 112.5 73 74.0
BraA09t39823Z Brassica rapa HOM05D003435 ORTHO05D004032 1.5e-23 112.5 73 74.0
Ca_24784_v3 Cicer arietinum L. HOM05D003435 ORTHO05D004032 1.5e-23 112.5 83 67.5
MD02G1168900 Malus domestica HOM05D003435 ORTHO05D004032 1.5e-23 112.5 73 74.0
TPR.G31102 Trifolium pratense HOM05D003435 ORTHO05D004032 1.5e-23 112.5 83 67.5
CSS0011380 Camellia sinensis var. sinensis HOM05D003435 ORTHO05D004032 2.0e-23 112.1 76 72.4
CSS0024619 Camellia sinensis var. sinensis HOM05D003435 ORTHO05D004032 2.0e-23 112.1 76 72.4
Eucgr.F01659 Eucalyptus grandis HOM05D003435 ORTHO05D004032 2.0e-23 112.1 76 71.1
Eucgr.F02662 Eucalyptus grandis HOM05D003435 ORTHO05D004032 2.0e-23 112.1 76 71.1
Manes.12G101600 Manihot esculenta HOM05D003435 ORTHO05D004032 2.0e-23 112.1 76 71.1
PSO541G5504 Papaver somniferum HOM05D003435 ORTHO05D004032 2.0e-23 112.1 76 71.1
PSO675G6314 Papaver somniferum HOM05D003435 ORTHO05D004032 2.0e-23 112.1 76 71.1
MSTRG.23766 Avicennia marina HOM05D003435 ORTHO05D004032 2.6e-23 111.7 73 74.0
Medtr5g017800 Medicago truncatula HOM05D003435 ORTHO05D004032 2.6e-23 111.7 83 67.5
Hund13566 Selenicereus undatus HOM05D003435 ORTHO05D004032 2.6e-23 111.7 69 76.8
THA.LOC104819223 Tarenaya hassleriana HOM05D003435 ORTHO05D004032 2.6e-23 111.7 76 71.1
vmacro17935 Vaccinium macrocarpon HOM05D003435 ORTHO05D004032 2.6e-23 111.7 76 72.4
AUR62031680 Chenopodium quinoa HOM05D003435 ORTHO05D004032 3.4e-23 111.3 76 71.1
DCAR_011292 Daucus carota HOM05D003435 ORTHO05D004032 3.4e-23 111.3 73 74.0
Manes.13G126200 Manihot esculenta HOM05D003435 ORTHO05D004032 3.4e-23 111.3 76 72.4
Psat2g165400 Pisum sativum HOM05D003435 ORTHO05D004032 3.4e-23 111.3 83 66.3
Sc03g0001420 Simmondsia chinensis HOM05D003435 ORTHO05D004032 3.4e-23 111.3 76 71.1
TAR381G0144 Trochodendron aralioides HOM05D003435 ORTHO05D004032 3.4e-23 111.3 76 71.1
CAN.G836.66 Capsicum annuum HOM05D003435 ORTHO05D004032 4.5e-23 110.9 76 71.1
ClCG02G012690 Citrullus lanatus HOM05D003435 ORTHO05D004032 4.5e-23 110.9 76 69.7
Haze_15428 Corylus avellana HOM05D003435 ORTHO05D004032 4.5e-23 110.9 76 71.1
Lalb_Chr09g0323051 Lupinus albus HOM05D003435 ORTHO05D004032 4.5e-23 110.9 83 66.3
Peaxi162Scf00916g00135 Petunia axillaris HOM05D003435 ORTHO05D004032 4.5e-23 110.9 76 71.1
EL10Ac2g02707 Beta vulgaris HOM05D003435 ORTHO05D004032 5.9e-23 110.5 76 71.1
Rhsim08G0102200 Rhododendron simsii HOM05D003435 ORTHO05D004032 5.9e-23 110.5 76 71.1
AUR62032563 Chenopodium quinoa HOM05D003435 ORTHO05D004032 7.7e-23 110.2 76 69.7
ECA232G3039 Erigeron canadensis HOM05D003435 ORTHO05D004032 7.7e-23 110.2 76 69.7
Sabra07G0036700 Salix brachista HOM05D003435 ORTHO05D004032 7.7e-23 110.2 76 71.1
Sed0012547 Sechium edule HOM05D003435 ORTHO05D004032 7.7e-23 110.2 76 69.7
Aa31LG4G18760 Aethionema arabicum HOM05D003435 ORTHO05D004032 1.0e-22 109.8 73 74.0
Cfa003996 Carpinus fangiana HOM05D003435 ORTHO05D004032 1.0e-22 109.8 76 69.7
MELO3C020891.2 Cucumis melo HOM05D003435 ORTHO05D004032 1.0e-22 109.8 76 68.4
CsaV3_2G016800 Cucumis sativus L. HOM05D003435 ORTHO05D004032 1.0e-22 109.8 76 68.4
Lj4C140G3 Lonicera japonica HOM05D003435 ORTHO05D004032 1.0e-22 109.8 76 71.1
Aqoxy6G01408_Aqoxy6G01409 Aquilegia oxysepala HOM05D003435 ORTHO05D004032 1.3e-22 109.4 76 69.7
HanXRQChr14g0430631 Helianthus annuus HOM05D003435 ORTHO05D004032 1.3e-22 109.4 76 69.7
Ah.10g029820 Amaranthus hybridus HOM05D003435 ORTHO05D004032 1.7e-22 109.0 76 69.7
SGA_v2.0_scaffold15G07262 Striga asiatica HOM05D003435 ORTHO05D004032 1.7e-22 109.0 76 68.4
ATR0021G056 Amborella trichopoda HOM05D003435 ORTHO05D004032 2.2e-22 108.6 76 69.7
Nitab4.5_0000310g0180 Nicotiana tabacum HOM05D003435 ORTHO05D004032 2.2e-22 108.6 76 71.1
Nitab4.5_0000961g0120 Nicotiana tabacum HOM05D003435 ORTHO05D004032 2.2e-22 108.6 76 71.1
Psat0ss9382g0080 Pisum sativum HOM05D003435 ORTHO05D004032 2.9e-22 108.2 75 69.3
TWI53G0909 Tripterygium wilfordii HOM05D003435 ORTHO05D004032 2.9e-22 108.2 76 69.7
VMungo1215G2578 Vigna mungo HOM05D003435 ORTHO05D004032 2.9e-22 108.2 76 71.1
Lalb_Chr16g0388361 Lupinus albus HOM05D003435 ORTHO05D004032 3.8e-22 107.8 76 71.1
Phvul.002G020500 Phaseolus vulgaris HOM05D003435 ORTHO05D004032 3.8e-22 107.8 76 69.7
SalBow5G2384 Salvia bowleyana HOM05D003435 ORTHO05D004032 3.8e-22 107.8 76 69.7
GSVIVG01002593001 Vitis vinifera HOM05D003435 ORTHO05D004032 3.8e-22 107.8 69 73.9
Lsat_1_v5_gn_4_167420 Lactuca sativa HOM05D003435 ORTHO05D004032 5.0e-22 107.5 76 68.4
Glyma.01G184500 Glycine max HOM05D003435 ORTHO05D004032 6.5e-22 107.1 83 62.7
TAR376G0307 Trochodendron aralioides HOM05D003435 ORTHO05D004032 6.5e-22 107.1 76 68.4
Solyc02g090570.4 Solanum lycopersicum HOM05D003435 ORTHO05D004032 8.5e-22 106.7 76 68.4
Sopen02g035220 Solanum pennellii HOM05D003435 ORTHO05D004032 8.5e-22 106.7 76 68.4
unitig_27.g25322 Utricularia gibba HOM05D003435 ORTHO05D004032 8.5e-22 106.7 72 72.2
Potri.005G136300 Populus trichocarpa HOM05D003435 ORTHO05D004032 1.4e-21 105.9 69 75.4
CDE05G0341 Ceratophyllum demersum HOM05D003435 ORTHO05D004032 2.5e-21 105.1 76 65.8
CDE05G0324 Ceratophyllum demersum HOM05D003435 ORTHO05D004032 5.5e-21 104.0 76 65.8
Nn1g05856 Nelumbo nucifera HOM05D003435 ORTHO05D004032 7.2e-21 103.6 76 65.8
Zm00001eb051800 Zea mays HOM05D003435 ORTHO05D004032 1.2e-20 102.8 76 65.8
SEGI_22339 Sequoiadendron giganteum HOM05D003435 ORTHO05D004032 1.6e-20 102.4 76 64.5
HPP92_006187 Vanilla planifolia HOM05D003435 ORTHO05D004032 1.6e-20 102.4 76 65.8
Nn5g30194 Nelumbo nucifera HOM05D003435 ORTHO05D004032 2.1e-20 102.1 76 67.1
HPP92_006173 Vanilla planifolia HOM05D003435 ORTHO05D004032 3.6e-20 101.3 76 64.5
SHI23026 Sapria himalayana HOM05D003435 ORTHO05D004032 7.9e-20 100.1 76 63.2
Migut.H00454 Erythranthe guttata HOM05D003435 ORTHO05D004032 1.4e-19 99.4 76 65.8
Rhsim06G0113700 Rhododendron simsii HOM05D003435 ORTHO05D004032 3.9e-19 97.8 76 63.2
SMO304G0064 Selaginella moellendorffii HOM05D003435 ORTHO05D004032 1.7e-17 92.4 74 59.5
HPP92_008982 Vanilla planifolia HOM05D003435 ORTHO05D004032 4.8e-17 90.9 82 54.9
AagrBONN_evm.TU.Sc2ySwM_117.2914 Anthoceros agrestis HOM05D003435 ORTHO05D004032 2.0e-15 85.5 84 52.4
Pp3c3_22080 Physcomitrium patens HOM05D003435 ORTHO05D004032 1.0e-14 83.2 73 54.8
Mapoly0038s0024 Marchantia polymorpha HOM05D003435 ORTHO05D004032 1.3e-14 82.8 84 52.4
Psat5g056680 Pisum sativum HOM05D003435 ORTHO05D023081 1.1e-13 79.7 63 63.5
CBR_g239 Chara braunii HOM05D003435 ORTHO05D004032 6.1e-12 73.9 78 48.7
CBR_g11121 Chara braunii HOM05D003435 ORTHO05D004032 1.8e-11 72.4 83 45.8


User provided reference genes

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