Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g09949 Brassica carinata HOM05D008251 ORTHO05D010450 2.8e-25 118.2 80 100.0
BcaC06g34809 Brassica carinata HOM05D008251 ORTHO05D010450 6.5e-22 107.1 80 77.5
BraA07t29392Z Brassica rapa HOM05D001855 ORTHO05D002493 2.3e-19 98.6 75 76.0
A07p16690 Brassica napus HOM05D008251 ORTHO05D010450 3.9e-19 97.8 73 78.1
C07p24410 Brassica napus HOM05D008251 ORTHO05D010450 3.9e-19 97.8 73 78.1
Thhalv10005599m.g Eutrema salsugineum HOM05D008251 ORTHO05D010450 2.8e-17 91.7 79 69.6
AT5G67265 Arabidopsis thaliana HOM05D008251 ORTHO05D010450 4.8e-17 90.9 78 62.8
AL8G44070 Arabidopsis lyrata HOM05D008251 ORTHO05D010450 8.2e-17 90.1 78 65.4
Sp2g29400 Schrenkiella parvula HOM05D008251 ORTHO05D010450 5.9e-15 84.0 70 68.6
Carub.0008s2724 Capsella rubella HOM05D008251 ORTHO05D010450 8.5e-14 80.1 78 59.0
CARHR280360 Cardamine hirsuta HOM05D008251 ORTHO05D010450 1.6e-12 75.9 50 76.0
TPR.G26911 Trifolium pratense HOM05D008251 ORTHO05D010450 3.3e-10 68.2 52 67.3
Ca_24740_v3 Cicer arietinum L. HOM05D008251 ORTHO05D010450 4.4e-10 67.8 52 67.3
THA.LOC104819244 Tarenaya hassleriana HOM05D008251 ORTHO05D010450 4.4e-10 67.8 53 71.7
Psat2g168200 Pisum sativum HOM05D008251 ORTHO05D010450 1.7e-09 65.9 52 63.5
Cpa.g.sc6.102 Carica papaya HOM05D008251 ORTHO05D010450 2.8e-09 65.1 56 64.3
FAN19G1615 Fragaria x ananassa HOM05D008251 ORTHO05D010450 2.8e-09 65.1 54 64.8
FAN23G2776 Fragaria x ananassa HOM05D008251 ORTHO05D010450 2.8e-09 65.1 54 64.8
FAN26G2689 Fragaria x ananassa HOM05D008251 ORTHO05D010450 2.8e-09 65.1 54 64.8
FAN28G2061 Fragaria x ananassa HOM05D008251 ORTHO05D010450 2.8e-09 65.1 54 64.8
Medtr5g016530 Medicago truncatula HOM05D008251 ORTHO05D010450 6.3e-09 63.9 54 63.0
FvH4_1g16720 Fragaria vesca HOM05D008251 ORTHO05D010450 1.4e-08 62.8 54 63.0
Glyma.01G189900 Glycine max HOM05D008251 ORTHO05D010450 9.1e-08 60.1 53 62.3
Duzib187G0638 Durio zibethinus HOM05D008251 ORTHO05D010450 2.0e-07 58.9 55 60.0
Lj2g0015966 Lotus japonicus HOM05D008251 ORTHO05D010450 2.0e-07 58.9 56 57.1
Phvul.010G095200 Phaseolus vulgaris HOM05D008251 ORTHO05D010450 3.5e-07 58.2 54 59.3
Lj7C76G10 Lonicera japonica HOM05D001855 ORTHO05D002034 5.9e-07 57.4 54 57.4
Gohir.A10G225800 Gossypium hirsutum HOM05D008251 ORTHO05D010450 1.0e-06 56.6 52 61.5
Gohir.D10G238324 Gossypium hirsutum HOM05D008251 ORTHO05D010450 1.0e-06 56.6 52 61.5
Gorai.011G273800 Gossypium raimondii HOM05D008251 ORTHO05D010450 1.0e-06 56.6 52 61.5
CsaV3_2G035600 Cucumis sativus L. HOM05D008251 ORTHO05D010450 1.7e-06 55.8 57 56.1
Peaxi162Scf00549g00047 Petunia axillaris HOM05D008251 ORTHO05D010450 2.2e-06 55.5 54 57.4
Sopen02g037520 Solanum pennellii HOM05D008251 ORTHO05D010450 2.2e-06 55.5 54 57.4
COL.COLO4_11479 Corchorus olitorius HOM05D008251 ORTHO05D010450 2.9e-06 55.1 52 61.5
Dinv26862 Davidia involucrata HOM05D008251 ORTHO05D010450 2.9e-06 55.1 49 57.1
Oeu009921.1 Olea europaea HOM05D000033 ORTHO05D002493 2.9e-06 55.1 57 52.6
PGSC0003DMG400024956 Solanum tuberosum HOM05D008251 ORTHO05D010450 2.9e-06 55.1 51 60.8
Thecc.01G063000 Theobroma cacao HOM05D008251 ORTHO05D010450 2.9e-06 55.1 52 61.5
Prupe.6G229400 Prunus persica HOM05D008251 ORTHO05D010450 3.8e-06 54.7 83 45.8
CAN.G370.14 Capsicum annuum HOM05D008251 ORTHO05D010450 6.5e-06 53.9 59 50.8
Gohir.D12G071900 Gossypium hirsutum HOM05D008251 ORTHO05D010450 6.5e-06 53.9 52 59.6
Sed0009308 Sechium edule HOM05D008251 ORTHO05D010450 6.5e-06 53.9 86 39.5


User provided reference genes

Program Settings