Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g09937 Brassica carinata HOM05D000589 ORTHO05D001885 3.6e-42 174.5 87 100.0
BcaC06g34714 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-22 109.0 81 69.1
BcaB03g15491 Brassica carinata HOM05D000589 ORTHO05D001885 5.6e-19 97.4 76 64.5
BcaC06g34173 Brassica carinata HOM05D000589 ORTHO05D001885 5.6e-19 97.4 83 60.2
BcaC05g25861 Brassica carinata HOM05D000589 ORTHO05D001885 2.8e-18 95.1 82 59.8
BraA02t07685Z Brassica rapa HOM05D000589 ORTHO05D001885 6.2e-18 94.0 86 57.0
BolC3t12574H Brassica oleracea HOM05D000589 ORTHO05D001885 8.1e-18 93.6 86 57.0
BcaC09g51508 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-17 93.2 83 59.0
BcaC04g22605 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-17 92.8 83 57.8
BolC4t26960H Brassica oleracea HOM05D000589 ORTHO05D001885 1.4e-17 92.8 74 63.5
BcaC04g22143 Brassica carinata HOM05D000589 ORTHO05D001885 2.4e-17 92.0 79 60.8
BolC3t19856H Brassica oleracea HOM05D000589 ORTHO05D000401 2.4e-17 92.0 79 59.5
BolC1t04845H Brassica oleracea HOM05D000589 ORTHO05D001885 4.0e-17 91.3 87 54.0
BcaB04g20296 Brassica carinata HOM05D000589 ORTHO05D001885 6.8e-17 90.5 76 60.5
BcaB01g02011 Brassica carinata HOM05D000589 ORTHO05D001885 8.9e-17 90.1 76 60.5
BolC3t17893H Brassica oleracea HOM05D000589 ORTHO05D000401 1.2e-16 89.7 76 60.5
C08p03150 Brassica napus HOM05D000930 ORTHO05D000748 8.4e-15 83.6 82 56.1
BcaB01g01573 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-14 82.4 76 57.9
BcaB01g01311 Brassica carinata HOM05D000589 ORTHO05D001885 3.2e-14 81.6 77 55.8
BcaB08g36271 Brassica carinata HOM05D000589 ORTHO05D001885 5.4e-14 80.9 76 56.6
BcaC01g05797 Brassica carinata HOM05D000589 ORTHO05D001885 5.4e-14 80.9 76 56.6
BcaC06g33723 Brassica carinata HOM05D000589 ORTHO05D001885 9.2e-14 80.1 76 56.6
BcaC01g00334 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-13 79.7 79 55.7
BcaC04g22612 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-13 79.7 79 55.7
BcaC08g44546 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-13 79.7 83 49.4
BcaC09g48394 Brassica carinata HOM05D000589 ORTHO05D001885 2.7e-13 78.6 76 56.6
BraA01t03046Z Brassica rapa HOM05D000589 ORTHO05D001885 4.6e-13 77.8 77 54.5
BraA08t32605Z Brassica rapa HOM05D000589 ORTHO05D001885 4.6e-13 77.8 77 54.5
BcaB03g15329 Brassica carinata HOM05D000589 ORTHO05D001885 6.0e-13 77.4 76 55.3
BcaB04g18988 Brassica carinata HOM05D000589 ORTHO05D001885 6.0e-13 77.4 77 50.6
BcaC05g28348 Brassica carinata HOM05D000589 ORTHO05D001885 6.0e-13 77.4 76 53.9
BcaB05g22907 Brassica carinata HOM05D000589 ORTHO05D001885 7.8e-13 77.0 72 56.9
BcaB07g32349 Brassica carinata HOM05D000589 ORTHO05D001885 7.8e-13 77.0 76 51.3
BcaC04g22355 Brassica carinata HOM05D000589 ORTHO05D001885 7.8e-13 77.0 76 55.3
BcaC05g29003 Brassica carinata HOM05D000589 ORTHO05D001885 1.0e-12 76.6 76 55.3
BcaC02g12351 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-12 76.3 85 52.9
BraA07t28350Z Brassica rapa HOM05D000589 ORTHO05D001885 1.3e-12 76.3 77 53.2
BcaC04g21586 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-12 75.9 76 55.3
BcaC05g25328 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-12 75.9 75 54.7
BolC6t35247H Brassica oleracea HOM05D000589 ORTHO05D001885 1.7e-12 75.9 76 53.9
BraA02t07620Z Brassica rapa HOM05D000589 ORTHO05D001885 1.7e-12 75.9 76 51.3
BolC6t37491H Brassica oleracea HOM05D000589 ORTHO05D001885 3.0e-12 75.1 77 53.2
BolC9t55020H Brassica oleracea HOM05D000589 ORTHO05D001885 3.0e-12 75.1 77 57.1
BraA04t17042Z Brassica rapa HOM05D000589 ORTHO05D001885 3.9e-12 74.7 77 50.6
BraA08t32950Z Brassica rapa HOM05D000589 ORTHO05D001885 3.9e-12 74.7 77 51.9
BcaC04g21787 Brassica carinata HOM05D000589 ORTHO05D001885 5.1e-12 74.3 79 53.2
BolC8t49278H Brassica oleracea HOM05D000589 ORTHO05D001885 5.1e-12 74.3 77 50.6
BcaB01g05554 Brassica carinata HOM05D000589 ORTHO05D001885 6.6e-12 73.9 79 50.6
BcaC02g08929 Brassica carinata HOM05D000589 ORTHO05D001885 6.6e-12 73.9 75 54.7
BcaC05g28962 Brassica carinata HOM05D000589 ORTHO05D001885 6.6e-12 73.9 79 50.6
BolC4t25855H Brassica oleracea HOM05D000589 ORTHO05D001885 6.6e-12 73.9 79 50.6
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 6.6e-12 73.9 77 53.2
BolC4t25876H Brassica oleracea HOM05D000589 ORTHO05D001885 8.7e-12 73.6 84 48.8
BolC6t38706H Brassica oleracea HOM05D000589 ORTHO05D001885 8.7e-12 73.6 77 53.2
BcaB06g26956 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-11 73.2 82 53.7
BcaB06g27274 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-11 73.2 79 49.4
BcaC07g38195 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-11 73.2 76 52.6
BraA03t14502Z Brassica rapa HOM05D000589 ORTHO05D001885 1.5e-11 72.8 77 50.6
BcaB06g27723 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-11 72.4 78 53.8
BcaC02g11766 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-11 72.4 84 51.2
BolC9t54652H Brassica oleracea HOM05D000589 ORTHO05D001885 2.5e-11 72.0 77 51.9
BcaC06g36688 Brassica carinata HOM05D001498 ORTHO05D001885 3.3e-11 71.6 77 51.9
BolC4t25125H Brassica oleracea HOM05D000589 ORTHO05D001885 3.3e-11 71.6 77 51.9
BolC8t49419H Brassica oleracea HOM05D000589 ORTHO05D001885 3.3e-11 71.6 77 51.9
BcaB04g20434 Brassica carinata HOM05D000589 ORTHO05D001885 4.3e-11 71.2 84 48.8
BcaC03g18153 Brassica carinata HOM05D000589 ORTHO05D001885 7.3e-11 70.5 76 51.3
BcaC08g44374 Brassica carinata HOM05D001498 ORTHO05D008559 7.3e-11 70.5 77 51.9
BcaNung06643 Brassica carinata HOM05D000589 ORTHO05D094827 7.3e-11 70.5 67 61.2
BcaB01g01446 Brassica carinata HOM05D000589 ORTHO05D001885 9.6e-11 70.1 72 50.0
BcaB01g02139 Brassica carinata HOM05D000589 ORTHO05D001885 9.6e-11 70.1 72 50.0
BcaC03g15667 Brassica carinata HOM05D000589 ORTHO05D001885 9.6e-11 70.1 81 49.4
BolC9t57315H Brassica oleracea HOM05D000589 ORTHO05D001885 1.6e-10 69.3 77 50.6
BcaC06g33454 Brassica carinata HOM05D000589 ORTHO05D001885 2.1e-10 68.9 76 53.9
BcaC08g45585 Brassica carinata HOM05D000589 ORTHO05D001885 2.1e-10 68.9 71 53.5
BraA09t38531Z Brassica rapa HOM05D000589 ORTHO05D001885 2.1e-10 68.9 79 50.6
BcaB06g25896 Brassica carinata HOM05D000589 ORTHO05D001885 2.8e-10 68.6 66 57.6
BolC1t01662H Brassica oleracea HOM05D000589 ORTHO05D001885 2.8e-10 68.6 72 51.4
BolC1t02335H Brassica oleracea HOM05D000589 ORTHO05D001885 2.8e-10 68.6 80 51.2
BolC2t10463H Brassica oleracea HOM05D000589 ORTHO05D000401 2.8e-10 68.6 79 49.4
BcaB05g24472 Brassica carinata HOM05D000589 ORTHO05D001885 3.6e-10 68.2 67 58.2
BcaB06g25993 Brassica carinata HOM05D000589 ORTHO05D001885 3.6e-10 68.2 79 51.9
BcaC05g25264 Brassica carinata HOM05D000589 ORTHO05D001885 3.6e-10 68.2 76 52.6
BolC7t42427H Brassica oleracea HOM05D000589 ORTHO05D001885 4.8e-10 67.8 79 45.6
BcaB05g24213 Brassica carinata HOM05D000589 ORTHO05D001885 6.2e-10 67.4 77 46.8
BcaB06g26227 Brassica carinata HOM05D000589 ORTHO05D001885 6.2e-10 67.4 74 48.6
BcaB06g28242 Brassica carinata HOM05D000589 ORTHO05D001885 6.2e-10 67.4 77 51.9
BcaC05g28209 Brassica carinata HOM05D000589 ORTHO05D001885 6.2e-10 67.4 76 51.3
BcaNung04078 Brassica carinata HOM05D000589 ORTHO05D001885 6.2e-10 67.4 77 51.9
BolC8t47336H Brassica oleracea HOM05D000589 ORTHO05D000401 6.2e-10 67.4 76 50.0
BcaB08g34473 Brassica carinata HOM05D000589 ORTHO05D001885 8.1e-10 67.0 69 56.5
BcaC04g18907 Brassica carinata HOM05D000589 ORTHO05D001885 8.1e-10 67.0 74 47.3
BcaC02g11767 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-09 66.6 76 52.6
BcaC02g08679 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-09 66.2 70 48.6
BcaC05g25870 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-09 66.2 76 48.7
BcaB07g32905 Brassica carinata HOM05D000589 ORTHO05D001885 1.8e-09 65.9 76 48.7
BcaC08g45829 Brassica carinata HOM05D000589 ORTHO05D001885 1.8e-09 65.9 76 52.6
BcaB03g13920 Brassica carinata HOM05D000589 ORTHO05D001885 2.4e-09 65.5 76 48.7
BcaC04g22653 Brassica carinata HOM05D000589 ORTHO05D016749 2.4e-09 65.5 74 47.3
C03p80460 Brassica napus HOM05D000589 ORTHO05D001885 2.4e-09 65.5 72 50.0
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 2.4e-09 65.5 72 50.0
BcaC04g19451 Brassica carinata HOM05D000589 ORTHO05D001885 3.1e-09 65.1 77 49.4
BolC8t47924H Brassica oleracea HOM05D000589 ORTHO05D000401 5.3e-09 64.3 74 51.4
BcaC04g19792 Brassica carinata HOM05D000589 ORTHO05D001885 6.9e-09 63.9 76 48.7
BcaC04g20928 Brassica carinata HOM05D000589 ORTHO05D001885 6.9e-09 63.9 76 47.4
BcaC07g38282 Brassica carinata HOM05D000589 ORTHO05D001885 6.9e-09 63.9 72 54.2
BcaC09g50125 Brassica carinata HOM05D000589 ORTHO05D001885 6.9e-09 63.9 76 47.4
BolC1t02802H Brassica oleracea HOM05D000589 ORTHO05D000401 6.9e-09 63.9 76 47.4
BcaB01g04884 Brassica carinata HOM05D000589 ORTHO05D001885 9.0e-09 63.5 74 44.6
BcaB02g07028 Brassica carinata HOM05D000589 ORTHO05D001885 9.0e-09 63.5 76 48.7
BcaB02g07279 Brassica carinata HOM05D000589 ORTHO05D001885 9.0e-09 63.5 81 49.4
BcaB05g21802 Brassica carinata HOM05D000589 ORTHO05D001885 9.0e-09 63.5 72 52.8
BcaC03g14470 Brassica carinata HOM05D000589 ORTHO05D001885 9.0e-09 63.5 74 48.6
BolC6t36239H Brassica oleracea HOM05D000589 ORTHO05D001885 1.2e-08 63.2 77 48.1
BcaC02g08590 Brassica carinata HOM05D000589 ORTHO05D001885 1.5e-08 62.8 76 48.7
C01p30550 Brassica napus HOM05D000589 ORTHO05D001885 1.5e-08 62.8 72 50.0
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 1.5e-08 62.8 71 49.3
BcaC01g00898 Brassica carinata HOM05D000589 ORTHO05D001885 2.6e-08 62.0 74 44.6
BcaC02g08655 Brassica carinata HOM05D000589 ORTHO05D001885 2.6e-08 62.0 75 46.7
BcaC06g35166 Brassica carinata HOM05D000589 ORTHO05D001885 2.6e-08 62.0 74 44.6
BcaC06g35854 Brassica carinata HOM05D002078 ORTHO05D010191 2.6e-08 62.0 74 45.9
BcaC08g46754 Brassica carinata HOM05D000589 ORTHO05D001885 2.6e-08 62.0 74 44.6
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 2.6e-08 62.0 72 48.6
BcaB05g22170 Brassica carinata HOM05D000589 ORTHO05D001885 3.4e-08 61.6 77 48.1
BcaB02g09875 Brassica carinata HOM05D000589 ORTHO05D001885 4.4e-08 61.2 72 48.6
BcaC01g01963 Brassica carinata HOM05D000589 ORTHO05D001885 5.8e-08 60.8 74 45.9
BcaC06g33599 Brassica carinata HOM05D000589 ORTHO05D001885 5.8e-08 60.8 74 43.2
BcaC04g22510 Brassica carinata HOM05D000589 ORTHO05D001885 7.6e-08 60.5 74 43.2
BcaC06g35383 Brassica carinata HOM05D000589 ORTHO05D001885 7.6e-08 60.5 76 46.1
BcaB06g25421 Brassica carinata HOM05D000589 ORTHO05D001885 9.9e-08 60.1 77 44.2
BraA03t15289Z Brassica rapa HOM05D000589 ORTHO05D001885 9.9e-08 60.1 85 43.5
BcaB02g07830 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-07 59.7 81 48.1
Carub.0007s3076 Capsella rubella HOM05D000589 ORTHO05D001885 1.3e-07 59.7 84 41.7
BolC8t48988H Brassica oleracea HOM05D000589 ORTHO05D001885 1.7e-07 59.3 72 44.4
BcaB02g10869 Brassica carinata HOM05D000589 ORTHO05D001885 2.2e-07 58.9 69 47.8
BcaC06g32032 Brassica carinata HOM05D000589 ORTHO05D001885 2.2e-07 58.9 77 48.1
BcaC08g45577 Brassica carinata HOM05D000589 ORTHO05D001885 2.2e-07 58.9 77 45.5
BcaC07g39835 Brassica carinata HOM05D000589 ORTHO05D001885 2.9e-07 58.5 77 45.5
BolC9t54041H Brassica oleracea HOM05D000589 ORTHO05D000401 3.8e-07 58.2 63 52.4
BcaC03g16344 Brassica carinata HOM05D000589 ORTHO05D001885 4.9e-07 57.8 67 52.2
BcaC01g00765 Brassica carinata HOM05D000589 ORTHO05D096280 6.4e-07 57.4 63 54.0
BcaC01g05146 Brassica carinata HOM05D000589 ORTHO05D001885 6.4e-07 57.4 77 45.5
BcaC03g16729 Brassica carinata HOM05D000589 ORTHO05D004260 1.1e-06 56.6 64 53.1
BcaC03g18011 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-06 56.6 67 49.3
BolC9t55626H Brassica oleracea HOM05D000589 ORTHO05D001885 1.1e-06 56.6 65 49.2
BolC8t48273H Brassica oleracea HOM05D000589 ORTHO05D001885 1.4e-06 56.2 77 46.8
BcaB05g22145 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-06 55.8 72 47.2
BcaC07g40780 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-06 55.8 76 43.4
BraA09t40146Z Brassica rapa HOM05D000589 ORTHO05D001885 1.9e-06 55.8 45 57.8
BcaB03g15647 Brassica carinata HOM05D000589 ORTHO05D001885 2.4e-06 55.5 77 45.5
BcaB03g14285 Brassica carinata HOM05D000589 ORTHO05D001885 4.2e-06 54.7 69 44.9
BcaC03g18339 Brassica carinata HOM05D000589 ORTHO05D001885 9.3e-06 53.5 70 44.3


User provided reference genes

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