Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g09868 Brassica carinata HOM05D018403 ORTHO05D000462 1.7e-82 309.3 154 100.0
BcaB02g09871 Brassica carinata HOM05D018403 ORTHO05D000462 1.7e-82 309.3 154 100.0
BraA06t26128Z Brassica rapa HOM05D000609 ORTHO05D000462 3.4e-51 205.3 224 54.5
Thhalv10005326m.g Eutrema salsugineum HOM05D000609 ORTHO05D000462 4.9e-34 148.3 255 42.0
BcaC01g02744 Brassica carinata HOM05D000609 ORTHO05D000462 2.3e-31 139.4 250 41.6
C03p60990 Brassica napus HOM05D000609 ORTHO05D000462 2.3e-31 139.4 250 41.6
BolC3t18361H Brassica oleracea HOM05D000609 ORTHO05D000462 2.3e-31 139.4 250 41.6
BcaC03g18306 Brassica carinata HOM05D000609 ORTHO05D000462 8.6e-31 137.5 246 41.5
C02p63820 Brassica napus HOM05D000609 ORTHO05D000462 8.6e-31 137.5 246 41.5
BolC2t12450H Brassica oleracea HOM05D000609 ORTHO05D000462 8.6e-31 137.5 246 41.5
BcaB07g29775 Brassica carinata HOM05D018403 ORTHO05D000462 1.1e-30 137.1 169 52.1
Sp2g28210 Schrenkiella parvula HOM05D000609 ORTHO05D000462 3.3e-30 135.6 253 39.9
A02p43690 Brassica napus HOM05D000609 ORTHO05D000462 4.0e-28 128.6 249 40.2
BraA02t09293Z Brassica rapa HOM05D000609 ORTHO05D000462 4.0e-28 128.6 249 40.2
BcaB02g09877 Brassica carinata HOM05D000609 ORTHO05D000462 3.4e-27 125.6 249 38.6
BcaB07g29776 Brassica carinata HOM05D000609 ORTHO05D000462 5.8e-27 124.8 242 40.1
BcaB07g29778 Brassica carinata HOM05D000609 ORTHO05D000462 5.8e-27 124.8 242 40.1
BraA06t26129Z Brassica rapa HOM05D000609 ORTHO05D000462 7.6e-27 124.4 252 39.3
C03p61000 Brassica napus HOM05D000609 ORTHO05D000462 8.4e-26 120.9 251 36.3
A06p31970 Brassica napus HOM05D000609 ORTHO05D000462 1.9e-25 119.8 252 38.5
Carub.0008s2597 Capsella rubella HOM05D000609 ORTHO05D000462 3.9e-23 112.1 254 34.6
AL8G42630 Arabidopsis lyrata HOM05D000609 ORTHO05D000462 1.3e-21 107.1 260 34.6
CARHR279040 Cardamine hirsuta HOM05D000609 ORTHO05D000462 4.8e-21 105.1 243 37.9
BcaC01g02743 Brassica carinata HOM05D000609 ORTHO05D000462 1.8e-20 103.2 103 58.3
AT5G65130 Arabidopsis thaliana HOM05D000609 ORTHO05D000462 5.3e-20 101.7 255 35.3
BcaC01g02742 Brassica carinata HOM05D018403 ORTHO05D032937 4.4e-19 98.6 59 78.0
BolC3t18362H Brassica oleracea HOM05D018403 ORTHO05D032937 4.4e-19 98.6 59 78.0
BcaB02g09866 Brassica carinata HOM05D000609 ORTHO05D000462 3.8e-18 95.5 45 97.8
BcaC03g18305 Brassica carinata HOM05D018403 ORTHO05D093804 1.9e-17 93.2 161 44.1
A06p31950 Brassica napus HOM05D018403 ORTHO05D032937 1.5e-11 73.6 38 84.2
Aa31LG1G16840 Aethionema arabicum HOM05D000609 ORTHO05D000462 7.9e-08 61.2 78 47.4
A06p31960 Brassica napus HOM05D000609 ORTHO05D000462 5.1e-07 58.5 35 74.3
THA.LOC104818489 Tarenaya hassleriana HOM05D000609 ORTHO05D000462 1.1e-06 57.4 90 44.4


User provided reference genes

Program Settings