Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g09838 Brassica carinata HOM05D012887 ORTHO05D008511 6.7e-70 267.3 142 100.0
BcaC01g02721 Brassica carinata HOM05D012887 ORTHO05D008511 1.3e-52 209.9 142 81.0
C03p61290 Brassica napus HOM05D012887 ORTHO05D008511 1.3e-52 209.9 142 81.0
BolC3t18390H Brassica oleracea HOM05D012887 ORTHO05D008511 1.3e-52 209.9 142 81.0
CARHR278890 Cardamine hirsuta HOM05D012887 ORTHO05D008511 8.8e-46 187.2 149 72.5
BraA06t26102Z Brassica rapa HOM05D012887 ORTHO05D008511 2.8e-44 182.2 116 82.8
A06p31670 Brassica napus HOM05D012887 ORTHO05D008511 6.3e-44 181.0 116 81.9
AL8G42370 Arabidopsis lyrata HOM05D012887 ORTHO05D008511 3.1e-43 178.7 150 70.0
AT5G64880 Arabidopsis thaliana HOM05D012887 ORTHO05D008511 3.4e-42 175.3 149 68.5
Sp2g27960 Schrenkiella parvula HOM05D012887 ORTHO05D008511 2.9e-41 172.2 117 82.1
Carub.0008s2571 Capsella rubella HOM05D012887 ORTHO05D008511 4.2e-40 168.3 150 66.0
Aa31LG1G17050 Aethionema arabicum HOM05D012887 ORTHO05D008511 2.3e-22 109.4 117 57.3
THA.LOC104799256 Tarenaya hassleriana HOM05D012887 ORTHO05D008511 1.1e-19 100.5 148 47.3
Duzib147G1655 Durio zibethinus HOM05D007384 ORTHO05D008511 1.0e-09 67.4 103 40.8
CANSAT01G1949 Cannabis sativa HOM05D007384 ORTHO05D008511 3.8e-09 65.5 97 39.2
CsaV3_2G017570 Cucumis sativus L. HOM05D007384 ORTHO05D008511 3.8e-09 65.5 147 34.0
Potri.005G083900 Populus trichocarpa HOM05D007384 ORTHO05D008511 5.0e-09 65.1 135 34.8
TWI77G0698 Tripterygium wilfordii HOM05D007384 ORTHO05D008511 8.6e-09 64.3 145 35.9
Duzib187G0804 Durio zibethinus HOM05D007384 ORTHO05D008511 1.9e-08 63.2 131 36.6
Manes.12G142100 Manihot esculenta HOM05D007384 ORTHO05D008511 9.5e-08 60.8 84 47.6
Thecc.01G112100 Theobroma cacao HOM05D007384 ORTHO05D008511 1.6e-07 60.1 144 34.0
Sabra05G0069000 Salix brachista HOM05D007384 ORTHO05D008511 2.1e-07 59.7 146 34.2
FAN26G2489 Fragaria x ananassa HOM05D007384 ORTHO05D008511 2.8e-07 59.3 111 37.8
Manes.13G077680 Manihot esculenta HOM05D007384 ORTHO05D008511 4.7e-07 58.5 70 47.1
Atru.chr4.403 Acer truncatum HOM05D007384 ORTHO05D008511 6.1e-07 58.2 79 45.6
FAN23G2853 Fragaria x ananassa HOM05D007384 ORTHO05D008511 6.1e-07 58.2 110 40.9
FAN19G0612 Fragaria x ananassa HOM05D007384 ORTHO05D008511 8.0e-07 57.8 108 38.9
FvH4_1g22200 Fragaria vesca HOM05D007384 ORTHO05D008511 1.8e-06 56.6 108 38.9
Duzib187G1860 Durio zibethinus HOM05D007384 ORTHO05D008511 2.3e-06 56.2 133 34.6
Gohir.A02G134800 Gossypium hirsutum HOM05D007384 ORTHO05D008511 2.3e-06 56.2 117 35.9
Gohir.A10G086700 Gossypium hirsutum HOM05D007384 ORTHO05D008511 3.0e-06 55.8 125 32.8
Lalb_Chr07g0184821 Lupinus albus HOM05D007384 ORTHO05D008511 5.2e-06 55.1 82 41.5
arahy.Tifrunner.gnm1.ann1.66AXK3 Arachis hypogaea HOM05D007384 ORTHO05D008511 6.8e-06 54.7 148 33.8
Potri.007G081700 Populus trichocarpa HOM05D007384 ORTHO05D008511 6.8e-06 54.7 111 34.2
TWI74G0307 Tripterygium wilfordii HOM05D007384 ORTHO05D008511 8.9e-06 54.3 101 36.6


User provided reference genes

Program Settings