Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g09812 Brassica carinata HOM05D009868 ORTHO05D012410 2.9e-131 472.2 297 100.0
Thhalv10005693m.g Eutrema salsugineum HOM05D009868 ORTHO05D012410 1.4e-61 240.7 331 60.1
BcaC04g23297 Brassica carinata HOM05D009868 ORTHO05D012410 7.2e-58 228.4 365 53.4
C09p10000 Brassica napus HOM05D009868 ORTHO05D012410 7.2e-58 228.4 365 53.4
BolC9t53908H Brassica oleracea HOM05D009868 ORTHO05D012410 3.6e-57 226.1 365 53.2
Sp2g27760 Schrenkiella parvula HOM05D009868 ORTHO05D012410 8.2e-54 214.9 337 57.6
A09p08780 Brassica napus HOM05D009868 ORTHO05D012410 1.0e-51 208.0 365 51.0
BraA06t26085Z Brassica rapa HOM05D009868 ORTHO05D027327 5.5e-50 202.2 214 73.8
CARHR278680 Cardamine hirsuta HOM05D009868 ORTHO05D012410 2.7e-49 199.9 312 56.7
BcaB04g19986 Brassica carinata HOM05D009868 ORTHO05D012410 4.7e-49 199.1 396 48.2
AL8G42140 Arabidopsis lyrata HOM05D009868 ORTHO05D012410 4.4e-47 192.6 262 55.3
AT5G64690 Arabidopsis thaliana HOM05D009868 ORTHO05D012410 1.0e-43 181.4 263 51.3
BcaB07g29752 Brassica carinata HOM05D009868 ORTHO05D012410 5.0e-43 179.1 304 57.2
BraA02t09266Z Brassica rapa HOM05D009868 ORTHO05D012410 1.5e-42 177.6 217 67.7
C02p63510 Brassica napus HOM05D009868 ORTHO05D012410 1.7e-38 164.1 418 45.5
A02p43410 Brassica napus HOM05D009868 ORTHO05D012410 2.4e-37 160.2 234 63.7
Carub.0008s2550 Capsella rubella HOM05D009868 ORTHO05D012410 4.5e-36 156.0 219 63.9
BolC2t12416H Brassica oleracea HOM05D009868 ORTHO05D012410 5.5e-34 149.1 418 43.8
C09p10040 Brassica napus HOM05D009868 ORTHO05D012410 2.7e-33 146.7 293 50.2
A06p31480 Brassica napus HOM05D009868 ORTHO05D027327 1.7e-30 137.5 189 65.1
BcaC03g18271 Brassica carinata HOM05D009868 ORTHO05D012410 1.8e-29 134.0 234 59.4
BraA09t36530Z Brassica rapa HOM05D009868 ORTHO05D012410 4.7e-25 119.4 97 66.0
Aa31LG1G17220 Aethionema arabicum HOM05D009868 ORTHO05D012410 4.6e-12 76.3 310 30.0
C09p10060 Brassica napus HOM05D009868 ORTHO05D012410 4.3e-10 69.7 110 71.8
BcaNung01386 Brassica carinata HOM05D004729 ORTHO05D005451 1.1e-08 65.1 90 53.3


User provided reference genes

Program Settings