Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g09768 Brassica carinata HOM05D004109 ORTHO05D005867 3.2e-262 907.9 470 100.0
C03p62550 Brassica napus HOM05D004109 ORTHO05D005867 2.2e-255 885.2 470 97.7
BolC3t18512H Brassica oleracea HOM05D004109 ORTHO05D005867 2.2e-255 885.2 470 97.7
BcaC01g02640 Brassica carinata HOM05D004109 ORTHO05D005867 8.5e-255 883.2 470 97.4
A06p30510 Brassica napus HOM05D004109 ORTHO05D005867 1.9e-254 882.1 470 97.2
BraA06t26000Z Brassica rapa HOM05D004109 ORTHO05D005867 5.5e-254 880.6 470 97.0
BcaNung04636 Brassica carinata HOM05D004109 ORTHO05D005867 1.1e-249 866.3 471 95.5
BcaC04g23349 Brassica carinata HOM05D004109 ORTHO05D005867 3.5e-248 861.3 471 94.7
BolC9t53868H Brassica oleracea HOM05D004109 ORTHO05D005867 3.5e-248 861.3 471 94.7
Sp2g26950 Schrenkiella parvula HOM05D004109 ORTHO05D005867 3.8e-247 857.8 470 95.3
C09p09570 Brassica napus HOM05D004109 ORTHO05D005867 8.5e-247 856.7 471 94.3
Thhalv10004035m.g Eutrema salsugineum HOM05D004109 ORTHO05D005867 3.2e-246 854.7 465 94.8
BraA09t36495Z Brassica rapa HOM05D004109 ORTHO05D005867 5.7e-243 844.0 472 94.1
A09p08450 Brassica napus HOM05D004109 ORTHO05D005867 1.7e-242 842.4 472 93.9
AL8G41120 Arabidopsis lyrata HOM05D004109 ORTHO05D005867 1.4e-241 839.3 465 93.3
CARHR277790 Cardamine hirsuta HOM05D004109 ORTHO05D005867 2.4e-241 838.6 465 92.9
AT5G63890 Arabidopsis thaliana HOM05D004109 ORTHO05D005867 4.1e-241 837.8 465 93.3
Carub.0008s2466 Capsella rubella HOM05D004109 ORTHO05D005867 2.0e-240 835.5 468 92.5
Aa31LG1G12300 Aethionema arabicum HOM05D004109 ORTHO05D005867 1.7e-239 832.4 473 92.0
THA.LOC104799477 Tarenaya hassleriana HOM05D004109 ORTHO05D005867 2.7e-232 808.5 474 87.3
THA.LOC104810828 Tarenaya hassleriana HOM05D004109 ORTHO05D005867 1.5e-227 792.7 474 84.6
Gohir.D13G129300 Gossypium hirsutum HOM05D004109 ORTHO05D005867 1.1e-217 760.0 462 83.3
Gorai.013G145300 Gossypium raimondii HOM05D004109 ORTHO05D005867 7.0e-217 757.3 462 82.9
Gohir.A13G125500 Gossypium hirsutum HOM05D004109 ORTHO05D005867 9.2e-217 756.9 462 82.9
Sabra11G0141200 Salix brachista HOM05D004109 ORTHO05D005867 1.6e-216 756.1 473 81.2
COL.COLO4_13719 Corchorus olitorius HOM05D004109 ORTHO05D005867 6.0e-216 754.2 440 85.0
Ciclev10015058m.g Citrus clementina HOM05D004109 ORTHO05D005867 1.3e-215 753.1 463 81.6
Potri.001G465300 Populus trichocarpa HOM05D004109 ORTHO05D005867 1.3e-215 753.1 435 86.7
Prupe.4G091700 Prunus persica HOM05D004109 ORTHO05D005867 1.3e-215 753.1 435 86.2
Duzib160G0240 Durio zibethinus HOM05D004109 ORTHO05D005867 2.3e-215 752.3 467 81.4
FvH4_3g10270 Fragaria vesca HOM05D004109 ORTHO05D005867 2.3e-215 752.3 458 82.1
Potri.011G163400 Populus trichocarpa HOM05D004109 ORTHO05D005867 2.3e-215 752.3 469 81.9
CANSAT01G0468 Cannabis sativa HOM05D004109 ORTHO05D005867 6.6e-215 750.7 464 81.2
MD10G1251700 Malus domestica HOM05D004109 ORTHO05D005867 1.5e-214 749.6 440 85.0
Cpa.g.sc139.36 Carica papaya HOM05D004109 ORTHO05D005867 2.5e-214 748.8 436 85.8
PGR083G1643 Punica granatum HOM05D004109 ORTHO05D005867 4.3e-214 748.0 439 84.5
MD05G1271100 Malus domestica HOM05D004109 ORTHO05D005867 9.5e-214 746.9 436 85.1
Manes.06G058300 Manihot esculenta HOM05D004109 ORTHO05D005867 9.5e-214 746.9 432 86.1
CSS0039858 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 4.7e-213 744.6 434 85.0
RcHm_v2.0_Chr5g0016531 Rosa chinensis HOM05D004109 ORTHO05D005867 1.1e-212 743.4 433 84.5
Hma1.2p1_0892F.1_g233350 Hydrangea macrophylla HOM05D004109 ORTHO05D005867 2.3e-212 742.3 437 85.4
BcaNung04631 Brassica carinata HOM05D004109 ORTHO05D005867 4.0e-212 741.5 439 89.7
Thecc.10G182100 Theobroma cacao HOM05D004109 ORTHO05D005867 5.2e-212 741.1 440 84.3
EL10Ac1g00099 Beta vulgaris HOM05D004109 ORTHO05D005867 6.8e-212 740.7 437 84.0
Ah.05g178270 Amaranthus hybridus HOM05D004109 ORTHO05D005867 8.9e-212 740.3 437 84.4
Atru.chr12.891 Acer truncatum HOM05D004109 ORTHO05D005867 1.2e-211 740.0 439 84.3
Solyc02g071890.3 Solanum lycopersicum HOM05D004109 ORTHO05D005867 1.2e-211 740.0 437 84.2
GSVIVG01001692001 Vitis vinifera HOM05D004109 ORTHO05D005867 1.5e-211 739.6 437 84.0
ECA238G2995 Erigeron canadensis HOM05D004109 ORTHO05D005867 3.4e-211 738.4 461 80.0
AUR62000071 Chenopodium quinoa HOM05D004109 ORTHO05D005867 4.4e-211 738.0 447 81.4
ClCG03G008220 Citrullus lanatus HOM05D004109 ORTHO05D005867 4.4e-211 738.0 467 79.9
Eucgr.D00111 Eucalyptus grandis HOM05D004109 ORTHO05D005867 4.4e-211 738.0 436 84.2
Nitab4.5_0001778g0190 Nicotiana tabacum HOM05D004109 ORTHO05D005867 1.3e-210 736.5 437 83.8
HanXRQChr07g0201181 Helianthus annuus HOM05D004109 ORTHO05D005867 2.2e-210 735.7 437 83.8
Lj7A233T12 Lonicera japonica HOM05D004109 ORTHO05D005867 2.9e-210 735.3 435 83.9
CAN.G411.27 Capsicum annuum HOM05D004109 ORTHO05D005867 4.9e-210 734.6 437 83.3
Glyma.15G131700 Glycine max HOM05D004109 ORTHO05D005867 8.3e-210 733.8 443 81.9
Duzib192G0069 Durio zibethinus HOM05D004109 ORTHO05D005867 1.1e-209 733.4 429 84.8
Rhsim07G0074000 Rhododendron simsii HOM05D004109 ORTHO05D005867 1.4e-209 733.0 441 83.2
FAN11G0285 Fragaria x ananassa HOM05D001785 ORTHO05D001933 2.4e-209 732.3 458 80.6
Nn7g37134 Nelumbo nucifera HOM05D004109 ORTHO05D005867 2.4e-209 732.3 443 82.2
Sopen02g020880 Solanum pennellii HOM05D004109 ORTHO05D005867 2.4e-209 732.3 433 84.3
Cfa002071 Carpinus fangiana HOM05D004109 ORTHO05D005867 7.0e-209 730.7 437 82.6
Sed0019466 Sechium edule HOM05D004109 ORTHO05D005867 7.0e-209 730.7 467 78.6
TAR369G0339 Trochodendron aralioides HOM05D004109 ORTHO05D005867 7.0e-209 730.7 441 82.1
Lsat_1_v5_gn_2_116541 Lactuca sativa HOM05D004109 ORTHO05D005867 9.2e-209 730.3 437 82.4
Sed0002561 Sechium edule HOM05D004109 ORTHO05D005867 9.2e-209 730.3 458 79.9
CSS0036381 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 1.2e-208 729.9 434 84.1
Cc02_g32120 Coffea canephora HOM05D004109 ORTHO05D005867 1.2e-208 729.9 468 78.4
MELO3C002828.2 Cucumis melo HOM05D004109 ORTHO05D005867 1.2e-208 729.9 437 82.8
Hund27096 Selenicereus undatus HOM05D004109 ORTHO05D005867 1.2e-208 729.9 447 81.2
CSS0030683 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 2.1e-208 729.2 429 84.1
CsaV3_1G037190 Cucumis sativus L. HOM05D004109 ORTHO05D005867 2.1e-208 729.2 448 81.5
Lj6g0008240 Lotus japonicus HOM05D004109 ORTHO05D005867 2.1e-208 729.2 437 83.3
Nitab4.5_0001793g0060 Nicotiana tabacum HOM05D004109 ORTHO05D005867 2.7e-208 728.8 437 82.6
MSTRG.20474 Avicennia marina HOM05D004109 ORTHO05D005867 3.9e-207 724.9 464 79.3
CiPaw.09G142500 Carya illinoinensis HOM05D004109 ORTHO05D005867 5.0e-207 724.5 437 82.2
Lalb_Chr20g0120131 Lupinus albus HOM05D004109 ORTHO05D005867 5.0e-207 724.5 437 82.4
Migut.B01142 Erythranthe guttata HOM05D004109 ORTHO05D005867 3.3e-206 721.8 435 82.8
Aqoxy7G00406 Aquilegia oxysepala HOM05D004109 ORTHO05D005867 7.3e-206 720.7 458 80.1
Glyma.09G025600 Glycine max HOM05D004109 ORTHO05D005867 9.5e-206 720.3 443 80.6
MBI02_g14218_MAGBIO Magnolia biondii HOM05D004109 ORTHO05D005867 9.5e-206 720.3 457 79.6
PSO675G4088 Papaver somniferum HOM05D004109 ORTHO05D005867 9.5e-206 720.3 440 81.1
Phvul.006G126900 Phaseolus vulgaris HOM05D004109 ORTHO05D005867 9.5e-206 720.3 442 80.3
Nitab4.5_0008572g0030 Nicotiana tabacum HOM05D004109 ORTHO05D005867 2.1e-205 719.2 426 83.6
PSO675G5109 Papaver somniferum HOM05D004109 ORTHO05D005867 2.8e-205 718.8 446 80.0
Sabra16G0315800 Salix brachista HOM05D004109 ORTHO05D005867 2.8e-205 718.8 447 81.9
Ca_00854_v3 Cicer arietinum L. HOM05D004109 ORTHO05D005867 3.6e-205 718.4 434 82.0
DCAR_003019 Daucus carota HOM05D004109 ORTHO05D005867 1.8e-204 716.1 460 77.2
arahy.Tifrunner.gnm1.ann1.S2DTMZ Arachis hypogaea HOM05D004109 ORTHO05D005867 2.3e-204 715.7 432 81.5
arahy.Tifrunner.gnm1.ann1.E4EMQ7 Arachis hypogaea HOM05D004109 ORTHO05D005867 8.9e-204 713.8 433 82.2
Psat1g166680 Pisum sativum HOM05D004109 ORTHO05D005867 8.9e-204 713.8 434 81.6
arahy.Tifrunner.gnm1.ann1.NJCF43 Arachis hypogaea HOM05D004256 ORTHO05D005224 1.2e-203 713.4 432 81.2
SGA_v2.0_scaffold114G32023 Striga asiatica HOM05D004109 ORTHO05D005867 2.0e-203 712.6 434 81.6
Os01g0232700 Oryza sativa ssp. japonica HOM05D004109 ORTHO05D005867 2.9e-202 708.8 435 81.6
FAN21G0038 Fragaria x ananassa HOM05D001785 ORTHO05D001933 8.3e-202 707.2 462 77.9
Lj4g0018356 Lotus japonicus HOM05D004109 ORTHO05D005867 8.3e-202 707.2 433 80.4
Glyma.08G081500 Glycine max HOM05D004109 ORTHO05D005867 1.1e-201 706.8 436 79.8
Phvul.002G198300 Phaseolus vulgaris HOM05D004109 ORTHO05D005867 1.9e-201 706.1 436 79.8
Medtr2g030520 Medicago truncatula HOM05D004109 ORTHO05D005867 5.4e-201 704.5 442 79.4
QL08p023474 Quercus lobata HOM05D004109 ORTHO05D005867 7.1e-201 704.1 440 80.7
ATR0810G187 Amborella trichopoda HOM05D004109 ORTHO05D005867 1.2e-200 703.4 431 81.0
RcHm_v2.0_Chr7g0241131 Rosa chinensis HOM05D004109 ORTHO05D005867 1.6e-200 703.0 435 80.9
arahy.Tifrunner.gnm1.ann1.X3TBAN Arachis hypogaea HOM05D004109 ORTHO05D005867 3.5e-200 701.8 462 77.3
FAN25G1737 Fragaria x ananassa HOM05D001785 ORTHO05D001933 3.5e-200 701.8 458 77.3
VMungo0540G0358 Vigna mungo HOM05D004109 ORTHO05D005867 7.8e-200 700.7 452 77.7
vmacro13807 Vaccinium macrocarpon HOM05D004109 ORTHO05D005867 1.0e-199 700.3 440 80.0
CDE06G2252 Ceratophyllum demersum HOM05D004109 ORTHO05D005867 1.7e-199 699.5 448 77.9
FAN16G0137 Fragaria x ananassa HOM05D001785 ORTHO05D001933 3.0e-199 698.7 462 77.5
Cfa005415 Carpinus fangiana HOM05D004109 ORTHO05D005867 8.6e-199 697.2 437 79.6
HPP92_000958 Vanilla planifolia HOM05D004109 ORTHO05D005867 4.7e-197 691.4 442 76.5
TWI63G1440 Tripterygium wilfordii HOM05D004109 ORTHO05D005867 1.8e-196 689.5 437 79.9
unitig_0.g2208 Utricularia gibba HOM05D004109 ORTHO05D005867 5.2e-196 688.0 431 79.4
CDE03G0162 Ceratophyllum demersum HOM05D004109 ORTHO05D005867 1.1e-193 680.2 437 77.8
SEGI_09299 Sequoiadendron giganteum HOM05D004109 ORTHO05D005867 9.2e-193 677.2 455 73.8
Sc26g0000620 Simmondsia chinensis HOM05D004109 ORTHO05D005867 2.7e-192 675.6 407 82.1
Nitab4.5_0003703g0080 Nicotiana tabacum HOM05D004109 ORTHO05D005867 2.0e-187 659.4 384 84.6
Pp3c25_2460 Physcomitrium patens HOM05D004109 ORTHO05D005867 6.2e-181 637.9 443 71.1
Mapoly0060s0093 Marchantia polymorpha HOM05D004109 ORTHO05D005867 1.8e-175 619.8 438 71.5
Pp3c16_4820 Physcomitrium patens HOM05D004109 ORTHO05D005867 1.5e-174 616.7 443 70.0
SMO137G0061 Selaginella moellendorffii HOM05D004109 ORTHO05D005867 8.1e-173 610.9 427 72.1
AagrBONN_evm.TU.Sc2ySwM_228.1565 Anthoceros agrestis HOM05D004109 ORTHO05D005867 3.1e-172 609.0 469 67.4
CBR_g8928 Chara braunii HOM05D004109 ORTHO05D005867 8.7e-167 590.9 473 64.5
Cre02.g077350 Chlamydomonas reinhardtii HOM05D004109 ORTHO05D005867 6.2e-165 584.7 427 69.1
AUR62019245 Chenopodium quinoa HOM05D004109 ORTHO05D005867 5.3e-164 581.6 360 80.6
PRCOL_00002586 Prasinoderma coloniale HOM05D004109 ORTHO05D005867 4.9e-162 575.1 429 67.6
vmacro23219 Vaccinium macrocarpon HOM05D004109 ORTHO05D005867 7.9e-160 567.8 474 66.0
MCO06G190 Micromonas commoda HOM05D004109 ORTHO05D005867 5.9e-155 551.6 428 67.5
CSS0014434 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 3.7e-149 532.3 318 83.3
Dinv23908 Davidia involucrata HOM05D004109 ORTHO05D005867 9.1e-148 527.7 315 83.5
Cfa023091 Carpinus fangiana HOM05D004109 ORTHO05D005867 7.5e-118 428.3 443 51.5
Haze_16420 Corylus avellana HOM05D004109 ORTHO05D005867 1.3e-114 417.5 273 76.9
Zm00001eb059830 Zea mays HOM05D004109 ORTHO05D005867 3.3e-113 412.9 286 75.9
SMO170G0053 Selaginella moellendorffii HOM05D004109 ORTHO05D005867 9.5e-113 411.4 330 66.1
TPR.G26361 Trifolium pratense HOM05D004109 ORTHO05D005867 1.0e-111 407.9 289 72.7
Peaxi162Scf00112g01722 Petunia axillaris HOM05D004109 ORTHO05D005867 1.3e-109 401.0 233 84.1
VMungo0251G1323 Vigna mungo HOM05D004256 ORTHO05D005224 7.0e-108 395.2 258 76.7
Peaxi162Scf00112g01719 Petunia axillaris HOM05D004109 ORTHO05D005867 1.6e-88 330.9 206 80.1
Migut.B01141 Erythranthe guttata HOM05D004109 ORTHO05D005867 2.1e-88 330.5 399 51.9
Actinidia34688 Actinidia chinensis HOM05D004109 ORTHO05D005867 1.9e-84 317.4 201 79.6
Haze_01914 Corylus avellana HOM05D004109 ORTHO05D005867 6.0e-83 312.4 176 86.9
VMungo0251G3018 Vigna mungo HOM05D004109 ORTHO05D005867 2.3e-82 310.5 179 82.7
BolC8t51924H Brassica oleracea HOM05D004109 ORTHO05D005867 5.6e-73 279.3 219 69.9
C01p45280 Brassica napus HOM05D004109 ORTHO05D005867 1.8e-71 274.2 223 70.0
C03p60030 Brassica napus HOM05D004109 ORTHO05D005867 9.0e-71 271.9 223 69.1
PSO675G6350 Papaver somniferum HOM05D004109 ORTHO05D005867 3.4e-70 270.0 216 67.6
BolC3t15408H Brassica oleracea HOM05D004109 ORTHO05D005867 1.3e-69 268.1 245 64.5
Haze_01911 Corylus avellana HOM05D004109 ORTHO05D001172 2.2e-69 267.3 222 64.0
Haze_27135 Corylus avellana HOM05D004109 ORTHO05D005867 2.7e-67 260.4 401 41.1
BcaC01g02810 Brassica carinata HOM05D004109 ORTHO05D005867 2.8e-64 250.4 221 64.7
Lsat_1_v5_gn_0_46200 Lactuca sativa HOM05D004109 ORTHO05D005867 1.1e-63 248.4 295 47.8
TPR.G39866 Trifolium pratense HOM05D004109 ORTHO05D005867 3.7e-56 223.4 122 86.9
CSS0037475 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 6.7e-50 202.6 116 84.5
SMO137G0105 Selaginella moellendorffii HOM05D004109 ORTHO05D019780 5.7e-41 172.9 188 53.2
CSS0025757 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 8.5e-37 159.1 89 84.3
PGSC0003DMG400028409 Solanum tuberosum HOM05D004109 ORTHO05D005867 4.2e-36 156.8 85 87.1
vmacro20533 Vaccinium macrocarpon HOM05D004109 ORTHO05D000800 4.1e-31 140.2 158 51.9
BcaC09g48845 Brassica carinata HOM05D004109 ORTHO05D009034 6.7e-26 122.9 212 43.9
Lsat_1_v5_gn_0_43980 Lactuca sativa HOM05D004109 ORTHO05D005867 1.7e-24 118.2 133 44.4
vmacro20532 Vaccinium macrocarpon HOM05D004109 ORTHO05D426529 1.7e-24 118.2 139 53.2
Lsat_1_v5_gn_2_130860 Lactuca sativa HOM05D004109 ORTHO05D019780 1.3e-21 108.6 67 82.1
vmacro21824 Vaccinium macrocarpon HOM05D004614 ORTHO05D005339 5.0e-21 106.7 125 51.2
HanXRQChr17g0545961 Helianthus annuus HOM05D004109 ORTHO05D225632 6.5e-21 106.3 105 55.2
Hma1.2p1_0258F.1_g104030 Hydrangea macrophylla HOM05D004109 ORTHO05D005867 3.3e-17 94.0 58 77.6
vmacro20529 Vaccinium macrocarpon HOM05D004109 ORTHO05D427059 3.7e-16 90.5 74 60.8
BolC3t18268H Brassica oleracea HOM05D004109 ORTHO05D005867 6.3e-16 89.7 51 94.1
PSO063G0645 Papaver somniferum HOM05D004109 ORTHO05D019780 1.1e-15 89.0 57 78.9
AagrBONN_evm.TU.Sc2ySwM_117.3019 Anthoceros agrestis HOM05D000719 ORTHO05D000569 3.1e-15 87.4 66 66.7
BolC3t18267H Brassica oleracea HOM05D004109 ORTHO05D019780 1.9e-12 78.2 46 87.0
arahy.Tifrunner.gnm1.ann1.P7LCDJ Arachis hypogaea HOM05D004109 ORTHO05D019780 3.6e-11 73.9 48 79.2
arahy.Tifrunner.gnm1.ann1.V2D64V Arachis hypogaea HOM05D004109 ORTHO05D019780 1.8e-10 71.6 69 60.9
vmacro09568 Vaccinium macrocarpon HOM05D004109 ORTHO05D003511 1.5e-09 68.6 69 60.9
Actinidia02690 Actinidia chinensis HOM05D004109 ORTHO05D054316 2.6e-09 67.8 49 71.4
Glyma.20G022700 Glycine max HOM05D004109 ORTHO05D019780 3.7e-08 63.9 37 83.8
vmacro07499 Vaccinium macrocarpon HOM05D004109 ORTHO05D426741 5.4e-07 60.1 51 66.7
SMO137G0306 Selaginella moellendorffii HOM05D004109 ORTHO05D377039 1.6e-06 58.5 31 83.9
Zm00001eb213480 Zea mays HOM05D002921 ORTHO05D003258 1.6e-06 58.5 60 60.0


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