Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g09698 Brassica carinata HOM05D016076 ORTHO05D012581 5.5e-132 474.2 218 100.0
BolC3t18642H Brassica oleracea HOM05D016076 ORTHO05D012581 4.0e-58 228.8 135 81.5
BcaC01g02529 Brassica carinata HOM05D016076 ORTHO05D012581 1.1e-52 210.7 121 81.8
AT5G62860 Arabidopsis thaliana HOM05D016076 ORTHO05D012581 3.9e-37 159.1 158 57.0
CARHR276650 Cardamine hirsuta HOM05D016076 ORTHO05D012581 1.4e-31 140.6 148 57.4
BcaB07g29855 Brassica carinata HOM05D000171 ORTHO05D000101 2.1e-30 136.7 220 42.3
BcaB02g09704 Brassica carinata HOM05D000503 ORTHO05D012581 4.6e-30 135.6 173 45.7
CARHR276640 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.1e-30 135.2 226 42.0
A06p29670 Brassica napus HOM05D000171 ORTHO05D012581 8.8e-29 131.3 171 45.0
BcaC01g02538 Brassica carinata HOM05D000171 ORTHO05D012581 1.5e-28 130.6 171 45.0
C03p63790 Brassica napus HOM05D000171 ORTHO05D012581 1.5e-28 130.6 171 45.0
BolC3t18635H Brassica oleracea HOM05D000171 ORTHO05D012581 1.5e-28 130.6 171 45.0
Thhalv10005626m.g Eutrema salsugineum HOM05D016076 ORTHO05D012581 3.1e-26 122.9 138 52.2
Carub.0008s2357 Capsella rubella HOM05D016076 ORTHO05D012581 1.5e-25 120.6 126 53.2
BcaC01g02539 Brassica carinata HOM05D000171 ORTHO05D012581 1.5e-20 104.0 106 49.1
C03p63780 Brassica napus HOM05D000171 ORTHO05D012581 1.5e-20 104.0 106 49.1
BolC3t18633H Brassica oleracea HOM05D000171 ORTHO05D012581 1.5e-20 104.0 106 49.1
BcaB06g28153 Brassica carinata HOM05D000171 ORTHO05D012581 4.4e-20 102.4 106 51.9
BolC3t21387H Brassica oleracea HOM05D000171 ORTHO05D000101 8.2e-19 98.2 199 33.7
BraA08t32262Z Brassica rapa HOM05D000171 ORTHO05D000101 1.1e-18 97.8 205 31.7
A08p02150 Brassica napus HOM05D000171 ORTHO05D000101 3.1e-18 96.3 198 32.3
BcaB06g28125 Brassica carinata HOM05D000171 ORTHO05D000101 1.3e-16 90.9 154 42.2
BraA06t25915Z Brassica rapa HOM05D000171 ORTHO05D012581 2.2e-16 90.1 105 47.6
A04p20720 Brassica napus HOM05D000171 ORTHO05D000101 2.9e-16 89.7 197 34.5
BraA04t17645Z Brassica rapa HOM05D000171 ORTHO05D000101 2.9e-16 89.7 197 34.5
C03p90650 Brassica napus HOM05D000171 ORTHO05D000101 5.0e-16 89.0 171 33.9
Carub.0002s0364 Capsella rubella HOM05D000171 ORTHO05D000101 1.1e-15 87.8 223 33.2
AL8G39860 Arabidopsis lyrata HOM05D016076 ORTHO05D012581 9.4e-15 84.7 55 69.1
AL1G60730 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.6e-14 84.0 218 32.6
BcaC02g08267 Brassica carinata HOM05D000171 ORTHO05D000101 1.6e-14 84.0 149 39.6
C04p56550 Brassica napus HOM05D000171 ORTHO05D000101 1.6e-14 84.0 149 39.6
BolC4t27182H Brassica oleracea HOM05D000171 ORTHO05D000101 1.6e-14 84.0 149 39.6
AL1G46630 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.6e-14 82.8 206 35.0
A04p20710 Brassica napus HOM05D000171 ORTHO05D000101 3.6e-14 82.8 150 40.0
AT5G50220 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 6.1e-14 82.0 197 32.5
BcaB03g15153 Brassica carinata HOM05D000171 ORTHO05D000101 8.0e-14 81.6 199 28.1
BraA04t17644Z Brassica rapa HOM05D000171 ORTHO05D000101 8.0e-14 81.6 150 39.3
Thhalv10010905m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 8.0e-14 81.6 226 32.3
BcaB07g33843 Brassica carinata HOM05D000171 ORTHO05D000101 1.0e-13 81.3 203 29.1
C04p46150 Brassica napus HOM05D000171 ORTHO05D000101 1.0e-13 81.3 205 30.7
BolC6t36328H Brassica oleracea HOM05D000171 ORTHO05D000101 1.8e-13 80.5 205 29.3
Thhalv10015870m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.8e-13 80.5 200 27.0
BolC3t17782H Brassica oleracea HOM05D000171 ORTHO05D000101 2.3e-13 80.1 202 29.7
AT1G47350 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.0e-13 79.7 204 28.4
BcaB06g28126 Brassica carinata HOM05D000171 ORTHO05D000101 3.0e-13 79.7 152 36.8
BolC4t26198H Brassica oleracea HOM05D000002 ORTHO05D000001 3.0e-13 79.7 205 30.7
BcaB01g04693 Brassica carinata HOM05D000171 ORTHO05D000101 4.0e-13 79.3 203 28.6
BcaC08g46210 Brassica carinata HOM05D000171 ORTHO05D000101 5.2e-13 79.0 200 28.5
C06p42080 Brassica napus HOM05D000171 ORTHO05D000101 5.2e-13 79.0 200 28.5
AT1G47340 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 6.7e-13 78.6 204 28.9
BcaC02g07989 Brassica carinata HOM05D000171 ORTHO05D000101 6.7e-13 78.6 215 29.8
BNapus_Darmor_BZH_scaffold_38p00410 Brassica napus HOM05D000171 ORTHO05D000101 6.7e-13 78.6 213 31.5
CARHR031540 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.7e-13 78.6 202 28.7
BcaB06g28544 Brassica carinata HOM05D000171 ORTHO05D000101 1.2e-12 77.8 213 31.5
BcaC02g07990 Brassica carinata HOM05D000171 ORTHO05D000101 1.2e-12 77.8 213 31.0
C04p61010 Brassica napus HOM05D000171 ORTHO05D000101 1.2e-12 77.8 215 29.8
C04p61040 Brassica napus HOM05D000171 ORTHO05D000101 1.2e-12 77.8 215 29.8
BolC4t27589H Brassica oleracea HOM05D000171 ORTHO05D000101 1.2e-12 77.8 215 29.8
BcaB02g09153 Brassica carinata HOM05D000171 ORTHO05D000101 1.5e-12 77.4 210 28.6
BcaB06g28421 Brassica carinata HOM05D000171 ORTHO05D000101 2.6e-12 76.6 204 30.4
BcaC01g01391 Brassica carinata HOM05D000171 ORTHO05D000101 2.6e-12 76.6 194 30.9
C03p91520 Brassica napus HOM05D000171 ORTHO05D000101 2.6e-12 76.6 194 30.9
C08p06400 Brassica napus HOM05D000171 ORTHO05D000101 2.6e-12 76.6 209 30.1
BolC3t21469H Brassica oleracea HOM05D000171 ORTHO05D000101 2.6e-12 76.6 194 30.9
BolC8t47486H Brassica oleracea HOM05D000171 ORTHO05D000101 2.6e-12 76.6 209 30.1
AL1G53520 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.4e-12 75.9 203 29.6
C03p55070 Brassica napus HOM05D000171 ORTHO05D000101 4.4e-12 75.9 204 29.4
AT1G46984 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 5.7e-12 75.5 217 27.2
BcaB02g09154 Brassica carinata HOM05D000171 ORTHO05D000101 5.7e-12 75.5 208 27.9
BcaC07g37220 Brassica carinata HOM05D000171 ORTHO05D000101 7.5e-12 75.1 209 30.1
BcaB03g15211 Brassica carinata HOM05D000171 ORTHO05D000101 1.3e-11 74.3 220 30.9
Carub.0005s0433 Capsella rubella HOM05D000171 ORTHO05D000101 1.3e-11 74.3 204 26.0
BraA08t32211Z Brassica rapa HOM05D000171 ORTHO05D000101 1.7e-11 73.9 193 31.6
BraA04t17945Z Brassica rapa HOM05D000171 ORTHO05D000101 2.2e-11 73.6 214 30.8
AL1G53540 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.8e-11 73.2 202 27.2
A02p14050 Brassica napus HOM05D000171 ORTHO05D000101 2.8e-11 73.2 215 29.8
BraA02t06466Z Brassica rapa HOM05D000171 ORTHO05D000101 2.8e-11 73.2 215 29.8
A04p24260 Brassica napus HOM05D000171 ORTHO05D000101 3.7e-11 72.8 214 30.4
A08p01570 Brassica napus HOM05D000171 ORTHO05D000101 3.7e-11 72.8 141 36.2
BcaB03g13759 Brassica carinata HOM05D000171 ORTHO05D000101 4.8e-11 72.4 230 28.3
CARHR288800 Cardamine hirsuta HOM05D000171 ORTHO05D000101 4.8e-11 72.4 210 28.1
A10p23320 Brassica napus HOM05D000171 ORTHO05D000101 6.3e-11 72.0 180 28.9
BraA10t44400Z Brassica rapa HOM05D000171 ORTHO05D000101 6.3e-11 72.0 180 28.9
BcaC08g44127 Brassica carinata HOM05D000171 ORTHO05D000101 8.2e-11 71.6 211 29.4
C09p08970 Brassica napus HOM05D000171 ORTHO05D000101 8.2e-11 71.6 205 29.8
BolC9t53809H Brassica oleracea HOM05D000171 ORTHO05D000101 8.2e-11 71.6 205 29.8
Carub.0001s4254 Capsella rubella HOM05D000171 ORTHO05D000101 8.2e-11 71.6 206 26.7
BcaC04g18942 Brassica carinata HOM05D000171 ORTHO05D000101 1.1e-10 71.2 204 27.9
AL1G53500 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.4e-10 70.9 201 28.9
BcaC04g23384 Brassica carinata HOM05D000171 ORTHO05D000101 1.4e-10 70.9 205 29.8
Carub.0004s0204 Capsella rubella HOM05D000171 ORTHO05D012581 1.4e-10 70.9 129 39.5
AL1G62530 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.8e-10 70.5 206 26.7
BcaC04g23380 Brassica carinata HOM05D000171 ORTHO05D000101 1.8e-10 70.5 205 30.2
Carub.0001s3323 Capsella rubella HOM05D000171 ORTHO05D000101 1.8e-10 70.5 185 33.5
A05p17940 Brassica napus HOM05D000171 ORTHO05D000101 2.4e-10 70.1 213 29.1
AL1G46270 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.1e-10 69.7 155 31.0
BcaC03g13912 Brassica carinata HOM05D000171 ORTHO05D000101 3.1e-10 69.7 213 30.0
A05p07390 Brassica napus HOM05D000171 ORTHO05D000101 3.1e-10 69.7 209 27.3
A08p16640 Brassica napus HOM05D000171 ORTHO05D000101 3.1e-10 69.7 215 28.4
C02p11230 Brassica napus HOM05D000171 ORTHO05D000101 3.1e-10 69.7 213 30.0
BraA05t19705Z Brassica rapa HOM05D000171 ORTHO05D000101 3.1e-10 69.7 209 27.3
BraA08t33629Z Brassica rapa HOM05D000171 ORTHO05D000101 3.1e-10 69.7 215 28.4
Thhalv10011099m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.1e-10 69.3 223 27.8
BcaB01g03057 Brassica carinata HOM05D000171 ORTHO05D000101 5.3e-10 68.9 201 28.9
Carub.0001s3224 Capsella rubella HOM05D000171 ORTHO05D000101 5.3e-10 68.9 206 28.2
Thhalv10009437m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.3e-10 68.9 206 26.7
C09p08930 Brassica napus HOM05D000171 ORTHO05D000101 7.0e-10 68.6 203 29.1
BolC9t53806H Brassica oleracea HOM05D000171 ORTHO05D000101 7.0e-10 68.6 203 29.1
Carub.0005s0581 Capsella rubella HOM05D000171 ORTHO05D000101 7.0e-10 68.6 205 30.7
BcaB02g09705 Brassica carinata HOM05D016076 ORTHO05D012581 9.1e-10 68.2 99 43.4
Sp5g04230 Schrenkiella parvula HOM05D000171 ORTHO05D000101 9.1e-10 68.2 148 29.7
BcaB08g36894 Brassica carinata HOM05D000171 ORTHO05D000101 1.2e-09 67.8 187 24.6
BcaC02g12025 Brassica carinata HOM05D000171 ORTHO05D000101 1.2e-09 67.8 152 31.6
A02p14060 Brassica napus HOM05D000171 ORTHO05D000101 1.2e-09 67.8 211 26.5
C04p08820 Brassica napus HOM05D000171 ORTHO05D000101 1.2e-09 67.8 152 31.6
BraA02t06469Z Brassica rapa HOM05D000171 ORTHO05D000101 1.2e-09 67.8 211 26.5
Thhalv10009341m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.2e-09 67.8 211 28.0
AT5G62510 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.6e-09 67.4 214 27.1
CARHR197660 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.6e-09 67.4 205 27.3
C09p61400 Brassica napus HOM05D000171 ORTHO05D000101 2.0e-09 67.0 180 27.8
AT1G26515 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.7e-09 66.6 195 28.2
C03p85560 Brassica napus HOM05D000171 ORTHO05D000101 2.7e-09 66.6 217 28.1
BolC3t20844H Brassica oleracea HOM05D000171 ORTHO05D000101 2.7e-09 66.6 217 28.1
BcaC01g04937 Brassica carinata HOM05D000171 ORTHO05D000101 3.5e-09 66.2 198 28.8
A03p26650 Brassica napus HOM05D000171 ORTHO05D000101 3.5e-09 66.2 199 30.2
BolC2t08420H Brassica oleracea HOM05D000171 ORTHO05D000101 3.5e-09 66.2 217 26.7
BolC3t15534H Brassica oleracea HOM05D000171 ORTHO05D000101 3.5e-09 66.2 198 28.8
BolC4t22474H Brassica oleracea HOM05D000171 ORTHO05D000101 3.5e-09 66.2 151 30.5
AL1G39230 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.5e-09 65.9 210 25.2
AL1G46260 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.5e-09 65.9 209 26.8
Carub.0001s3589 Capsella rubella HOM05D000171 ORTHO05D000101 4.5e-09 65.9 163 30.7
C04p18490 Brassica napus HOM05D000171 ORTHO05D000101 5.9e-09 65.5 153 34.0
BraA03t11876Z Brassica rapa HOM05D000171 ORTHO05D000101 5.9e-09 65.5 199 30.2
BraA05t19704Z Brassica rapa HOM05D000171 ORTHO05D000101 5.9e-09 65.5 152 30.9
CARHR219290 Cardamine hirsuta HOM05D000171 ORTHO05D000101 5.9e-09 65.5 191 27.2
Thhalv10009451m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.9e-09 65.5 200 29.5
Thhalv10019719m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.9e-09 65.5 188 29.3
C03p31920 Brassica napus HOM05D000171 ORTHO05D000101 7.7e-09 65.1 198 28.8
A05p25180 Brassica napus HOM05D000171 ORTHO05D000101 1.0e-08 64.7 197 26.4
Aa31LG4G12430 Aethionema arabicum HOM05D000171 ORTHO05D000101 1.3e-08 64.3 178 28.7
BraA05t21397Z Brassica rapa HOM05D000171 ORTHO05D000101 1.3e-08 64.3 197 26.4
AL1G53100 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.7e-08 63.9 202 28.2
Thhalv10009326m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.7e-08 63.9 197 26.9
AL6G33870 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.9e-08 63.2 206 27.2
BcaC05g27918 Brassica carinata HOM05D000171 ORTHO05D000101 2.9e-08 63.2 197 28.4
C05p39240 Brassica napus HOM05D000171 ORTHO05D000101 2.9e-08 63.2 197 28.4
BolC5t32658H Brassica oleracea HOM05D000171 ORTHO05D000101 2.9e-08 63.2 197 28.4
BcaC02g07817 Brassica carinata HOM05D000171 ORTHO05D000101 3.8e-08 62.8 174 27.6
Carub.0003s2951 Capsella rubella HOM05D000171 ORTHO05D000101 3.8e-08 62.8 216 25.9
AL6G26510 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.0e-08 62.4 180 27.2
CARHR276420 Cardamine hirsuta HOM05D000171 ORTHO05D000101 5.0e-08 62.4 204 26.5
Thhalv10012324m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.0e-08 62.4 192 26.0
THA.LOC104821034 Tarenaya hassleriana HOM05D000171 ORTHO05D000101 5.0e-08 62.4 216 28.2
AL8G25650 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 6.5e-08 62.0 126 38.9
C02p22670 Brassica napus HOM05D000171 ORTHO05D000101 6.5e-08 62.0 191 28.8
Carub.0008s0811 Capsella rubella HOM05D000171 ORTHO05D000101 6.5e-08 62.0 186 28.5
Thhalv10009932m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 6.5e-08 62.0 178 26.4
AT1G53550 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 8.5e-08 61.6 150 32.7
AT1G55070 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 8.5e-08 61.6 146 30.1
Carub.0001s2929 Capsella rubella HOM05D000171 ORTHO05D000101 1.1e-07 61.2 205 24.9
Thhalv10015900m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.9e-07 60.5 176 29.5
AL5G12460 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.5e-07 60.1 230 26.1
AT2G02660 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.5e-07 60.1 237 26.6
Aa31LG4G12400 Aethionema arabicum HOM05D000171 ORTHO05D000101 3.2e-07 59.7 187 29.4
A05p07370 Brassica napus HOM05D000171 ORTHO05D000101 3.2e-07 59.7 210 29.0
BraA05t19702Z Brassica rapa HOM05D000171 ORTHO05D000101 3.2e-07 59.7 210 29.0
Carub.0008s0812 Capsella rubella HOM05D000171 ORTHO05D000101 3.2e-07 59.7 146 30.8
CARHR171660 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.2e-07 59.7 110 34.5
BcaB05g22702 Brassica carinata HOM05D000171 ORTHO05D000101 4.2e-07 59.3 124 30.6
BcaC01g06613 Brassica carinata HOM05D000171 ORTHO05D000101 4.2e-07 59.3 156 28.8
A09p34040 Brassica napus HOM05D000171 ORTHO05D000101 5.5e-07 58.9 196 27.6
Sp1g09440 Schrenkiella parvula HOM05D000171 ORTHO05D000101 5.5e-07 58.9 172 23.8
BcaC01g04927 Brassica carinata HOM05D000171 ORTHO05D000101 7.2e-07 58.5 201 29.4
AT1G53790 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 9.4e-07 58.2 202 27.2
AT5G62660 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 9.4e-07 58.2 189 27.0
Carub.0008s2334 Capsella rubella HOM05D000171 ORTHO05D000101 9.4e-07 58.2 207 25.1
BraA08t33545Z Brassica rapa HOM05D000171 ORTHO05D000101 1.2e-06 57.8 209 27.8
THA.LOC104814678 Tarenaya hassleriana HOM05D000171 ORTHO05D000101 1.2e-06 57.8 220 25.9
CARHR036650 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.6e-06 57.4 122 32.8
Thhalv10023891m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.7e-06 56.6 197 26.9
AL1G62130 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.6e-06 56.2 150 27.3
C02p25890 Brassica napus HOM05D000171 ORTHO05D021829 3.6e-06 56.2 143 30.8
Carub.0008s2338 Capsella rubella HOM05D000171 ORTHO05D000101 3.6e-06 56.2 151 30.5
A07p32590 Brassica napus HOM05D000171 ORTHO05D000101 6.1e-06 55.5 144 29.9
BraA07t30883Z Brassica rapa HOM05D000171 ORTHO05D000101 6.1e-06 55.5 144 29.9
Carub.0008s0623 Capsella rubella HOM05D000171 ORTHO05D000101 8.0e-06 55.1 193 28.5
Thhalv10028106m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 8.0e-06 55.1 179 27.9


User provided reference genes

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