Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g09690 Brassica carinata HOM05D006304 ORTHO05D008584 0.0e+00 1191.8 620 100.0
Sp2g25930 Schrenkiella parvula HOM05D006304 ORTHO05D008584 1.2e-285 986.1 668 79.3
Thhalv10003777m.g Eutrema salsugineum HOM05D006304 ORTHO05D008584 6.3e-282 973.8 666 80.0
BcaC01g02519 Brassica carinata HOM05D006304 ORTHO05D008584 2.8e-274 948.3 637 80.7
C03p63960 Brassica napus HOM05D006304 ORTHO05D008584 1.1e-273 946.4 638 80.7
BolC3t18650H Brassica oleracea HOM05D006304 ORTHO05D008584 8.0e-269 930.2 665 77.4
A06p29540 Brassica napus HOM05D006304 ORTHO05D008584 1.8e-268 929.1 622 79.7
BraA06t25899Z Brassica rapa HOM05D006304 ORTHO05D008584 2.4e-265 918.7 645 77.1
AT5G62760 Arabidopsis thaliana HOM05D006304 ORTHO05D008584 4.5e-256 887.9 650 76.2
CARHR276550 Cardamine hirsuta HOM05D006304 ORTHO05D008584 1.1e-254 883.2 647 75.4
Carub.0008s2349 Capsella rubella HOM05D006304 ORTHO05D008584 1.7e-247 859.4 661 73.7
AL8G39730 Arabidopsis lyrata HOM05D006304 ORTHO05D008584 4.4e-243 844.7 651 74.2
Aa31LG11G920 Aethionema arabicum HOM05D006304 ORTHO05D008584 3.1e-212 742.3 699 62.4
THA.LOC104821457 Tarenaya hassleriana HOM05D006304 ORTHO05D008584 4.8e-205 718.4 681 59.6
Cpa.g.sc17.206 Carica papaya HOM05D006304 ORTHO05D008584 2.8e-149 533.1 797 44.0
Ciclev10019215m.g Citrus clementina HOM05D006304 ORTHO05D008584 2.6e-142 510.0 676 49.0
Sed0028137 Sechium edule HOM05D006304 ORTHO05D008584 4.1e-140 502.7 763 44.2
FvH4_5g15410 Fragaria vesca HOM05D006304 ORTHO05D008584 6.8e-135 485.3 701 45.4
GSVIVG01008051001 Vitis vinifera HOM05D006304 ORTHO05D008584 5.8e-134 482.3 692 46.1
Potri.015G064600 Populus trichocarpa HOM05D006304 ORTHO05D008584 3.7e-133 479.6 670 47.0
Gohir.D12G178452 Gossypium hirsutum HOM05D006304 ORTHO05D008584 1.9e-132 477.2 432 61.8
CANSAT80G1066 Cannabis sativa HOM05D006304 ORTHO05D008584 6.0e-131 472.2 731 44.9
Lj4g0004911 Lotus japonicus HOM05D006304 ORTHO05D008584 1.0e-130 471.5 699 43.9
Duzib205G0644 Durio zibethinus HOM05D006304 ORTHO05D008584 1.7e-130 470.7 726 44.6
VMungo1215G2961 Vigna mungo HOM05D006304 ORTHO05D008584 5.0e-130 469.2 687 44.4
Manes.06G096000 Manihot esculenta HOM05D006304 ORTHO05D008584 6.6e-130 468.8 652 47.2
Gorai.008G191000 Gossypium raimondii HOM05D006304 ORTHO05D008584 8.6e-130 468.4 721 44.8
Gohir.A12G175370 Gossypium hirsutum HOM05D006304 ORTHO05D008584 1.5e-129 467.6 721 44.7
arahy.Tifrunner.gnm1.ann1.E16Z9R Arachis hypogaea HOM05D006304 ORTHO05D008584 1.9e-129 467.2 736 42.7
MELO3C002204.2 Cucumis melo HOM05D006304 ORTHO05D008584 2.5e-129 466.8 862 39.3
FAN08G3028 Fragaria x ananassa HOM05D006304 ORTHO05D008584 2.5e-129 466.8 704 44.7
RcHm_v2.0_Chr7g0180671 Rosa chinensis HOM05D006304 ORTHO05D008584 2.5e-129 466.8 753 42.6
CsaV3_1G007890 Cucumis sativus L. HOM05D006304 ORTHO05D008584 7.3e-129 465.3 388 63.9
Glyma.17G097500 Glycine max HOM05D006304 ORTHO05D008584 7.3e-129 465.3 629 48.3
MD14G1195600 Malus domestica HOM05D006304 ORTHO05D008584 9.5e-129 464.9 756 43.5
FAN04G3159 Fragaria x ananassa HOM05D006304 ORTHO05D008584 4.7e-128 462.6 704 44.3
Oeu048746.1 Olea europaea HOM05D006304 ORTHO05D008584 3.1e-127 459.9 757 42.7
MD06G1188800 Malus domestica HOM05D006304 ORTHO05D008584 6.8e-127 458.8 763 42.9
Glyma.05G029400 Glycine max HOM05D006304 ORTHO05D008584 9.8e-126 454.9 640 46.2
Thecc.03G080300 Theobroma cacao HOM05D006304 ORTHO05D008584 1.3e-125 454.5 397 62.0
Prupe.5G187100 Prunus persica HOM05D006304 ORTHO05D008584 1.7e-125 454.1 793 41.6
Phvul.003G192300 Phaseolus vulgaris HOM05D006304 ORTHO05D008584 1.1e-124 451.4 727 43.6
Medtr4g107890 Medicago truncatula HOM05D006304 ORTHO05D008584 1.4e-124 451.1 717 43.7
Cfa018983 Carpinus fangiana HOM05D006304 ORTHO05D008584 5.4e-124 449.1 439 57.6
CiPaw.11G039300 Carya illinoinensis HOM05D006304 ORTHO05D008584 5.4e-124 449.1 391 60.6
PGR083G1524 Punica granatum HOM05D006304 ORTHO05D008584 7.1e-124 448.7 757 41.5
Actinidia34979 Actinidia chinensis HOM05D006304 ORTHO05D008584 2.7e-123 446.8 385 61.6
Cc04_g15450 Coffea canephora HOM05D006304 ORTHO05D008584 2.7e-123 446.8 393 61.1
Psat4g053720 Pisum sativum HOM05D006304 ORTHO05D008584 3.5e-123 446.4 389 61.7
Nitab4.5_0009895g0010 Nicotiana tabacum HOM05D006304 ORTHO05D008584 2.3e-122 443.7 386 61.9
TPR.G38415 Trifolium pratense HOM05D006304 ORTHO05D008584 2.3e-122 443.7 473 53.7
Nitab4.5_0000269g0180 Nicotiana tabacum HOM05D006304 ORTHO05D008584 5.1e-122 442.6 389 59.9
Sc10g0009990 Simmondsia chinensis HOM05D006304 ORTHO05D008584 6.6e-122 442.2 450 55.3
TAR371G0034 Trochodendron aralioides HOM05D006304 ORTHO05D008584 6.6e-122 442.2 393 60.8
TWI60G1649 Tripterygium wilfordii HOM05D006304 ORTHO05D008584 1.1e-121 441.4 765 41.3
Rhsim12G0159100 Rhododendron simsii HOM05D006304 ORTHO05D008584 1.9e-121 440.7 861 38.9
FAN18G3228 Fragaria x ananassa HOM05D006304 ORTHO05D008584 2.5e-121 440.3 728 41.9
CAN.G628.40 Capsicum annuum HOM05D006304 ORTHO05D008584 3.3e-121 439.9 451 56.3
Nn3g17140 Nelumbo nucifera HOM05D006304 ORTHO05D008584 5.6e-121 439.1 389 60.7
COL.COLO4_05911 Corchorus olitorius HOM05D006304 ORTHO05D008584 9.5e-121 438.3 648 46.0
TAR629G0077 Trochodendron aralioides HOM05D006304 ORTHO05D008584 2.1e-120 437.2 404 58.9
DCAR_021535 Daucus carota HOM05D006304 ORTHO05D008584 2.8e-120 436.8 386 61.1
Ca_21844_v3 Cicer arietinum L. HOM05D006304 ORTHO05D008584 3.6e-120 436.4 444 55.6
Sopen06g027340 Solanum pennellii HOM05D006304 ORTHO05D008584 6.2e-120 435.6 409 59.7
Aqoxy3G00750 Aquilegia oxysepala HOM05D006304 ORTHO05D008584 1.4e-119 434.5 737 42.2
SGA_v2.0_scaffold56G20049 Striga asiatica HOM05D006304 ORTHO05D008584 1.4e-119 434.5 747 41.9
Sabra15G0090300 Salix brachista HOM05D006304 ORTHO05D008584 6.8e-119 432.2 610 47.4
HanXRQChr02g0045271 Helianthus annuus HOM05D006304 ORTHO05D008584 2.6e-118 430.3 642 43.1
Migut.I00131 Erythranthe guttata HOM05D006304 ORTHO05D008584 5.8e-118 429.1 753 41.8
AUR62021733 Chenopodium quinoa HOM05D006304 ORTHO05D008584 7.6e-118 428.7 404 58.4
ECA247G4106 Erigeron canadensis HOM05D006304 ORTHO05D008584 7.6e-118 428.7 385 60.5
Hund09367 Selenicereus undatus HOM05D006304 ORTHO05D008584 9.9e-118 428.3 407 58.0
SalBow5G3794 Salvia bowleyana HOM05D006304 ORTHO05D008584 2.9e-117 426.8 434 57.1
Ah.11g048730 Amaranthus hybridus HOM05D006304 ORTHO05D008584 3.7e-117 426.4 393 59.3
AUR62008366 Chenopodium quinoa HOM05D006304 ORTHO05D008584 1.9e-116 424.1 404 57.9
MBI12_g19403_MAGBIO Magnolia biondii HOM05D006304 ORTHO05D008584 1.9e-116 424.1 393 60.1
Lj5A115T69 Lonicera japonica HOM05D006304 ORTHO05D008584 1.7e-114 417.5 443 55.5
Atru.chr9.2307 Acer truncatum HOM05D006304 ORTHO05D008584 6.6e-114 415.6 662 44.3
Actinidia19056 Actinidia chinensis HOM05D006304 ORTHO05D008584 5.6e-113 412.5 385 59.2
arahy.Tifrunner.gnm1.ann1.YQHF2A Arachis hypogaea HOM05D006304 ORTHO05D008584 5.6e-113 412.5 824 37.9
CDE06G1311 Ceratophyllum demersum HOM05D006304 ORTHO05D008584 5.6e-113 412.5 396 58.6
vmacro16566 Vaccinium macrocarpon HOM05D006304 ORTHO05D008584 4.7e-112 409.5 898 36.5
FAN13G0685 Fragaria x ananassa HOM05D006304 ORTHO05D008584 6.2e-112 409.1 696 41.7
Haze_07372 Corylus avellana HOM05D006304 ORTHO05D008584 5.2e-111 406.0 436 54.1
ClCG01G014430 Citrullus lanatus HOM05D006304 ORTHO05D008584 5.8e-110 402.5 968 34.1
unitig_0.g2536 Utricularia gibba HOM05D006304 ORTHO05D008584 2.2e-109 400.6 402 55.0
ATR1120G178 Amborella trichopoda HOM05D006304 ORTHO05D008584 5.4e-108 396.0 397 56.7
EL10Ac5g10949 Beta vulgaris HOM05D006304 ORTHO05D008584 1.0e-106 391.7 391 56.8
Solyc06g071040.4 Solanum lycopersicum HOM05D006304 ORTHO05D008584 1.7e-106 391.0 409 55.5
Os02g0215000 Oryza sativa ssp. japonica HOM05D006304 ORTHO05D008584 1.5e-105 387.9 386 56.7
HPP92_021789 Vanilla planifolia HOM05D006304 ORTHO05D008584 4.3e-105 386.3 402 56.2
Peaxi162Scf00013g00025 Petunia axillaris HOM05D006304 ORTHO05D008584 5.6e-105 386.0 387 56.6
Eucgr.B00434 Eucalyptus grandis HOM05D006304 ORTHO05D008584 9.6e-105 385.2 809 37.3
Dinv38671 Davidia involucrata HOM05D006304 ORTHO05D008584 4.4e-102 376.3 321 62.6
SEGI_29067 Sequoiadendron giganteum HOM05D006304 ORTHO05D008584 6.4e-101 372.5 400 54.2
Zm00001eb240230 Zea mays HOM05D006304 ORTHO05D008584 1.4e-100 371.3 397 54.9
Lsat_1_v5_gn_1_10941 Lactuca sativa HOM05D006304 ORTHO05D008584 4.8e-96 356.3 406 50.7
Lalb_Chr12g0196741 Lupinus albus HOM05D006304 ORTHO05D008584 1.1e-95 355.1 226 76.1
Mapoly0068s0038 Marchantia polymorpha HOM05D006304 ORTHO05D008584 1.7e-93 347.8 402 51.2
PSO017G6991 Papaver somniferum HOM05D006304 ORTHO05D008584 1.5e-89 334.7 281 61.9
CSS0050297 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 1.8e-87 327.8 201 77.6
CBR_g5693 Chara braunii HOM05D006304 ORTHO05D008584 7.7e-70 269.2 460 40.7
Oeu006477.2 Olea europaea HOM05D006304 ORTHO05D008584 1.4e-68 265.0 758 33.8
QL10p015696 Quercus lobata HOM05D006304 ORTHO05D008584 5.9e-62 243.0 242 56.2
Duzib084G0195 Durio zibethinus HOM05D006304 ORTHO05D008584 1.9e-60 238.0 273 54.2
Cre14.g629400 Chlamydomonas reinhardtii HOM05D006304 ORTHO05D008584 2.8e-40 171.0 198 46.0
PGSC0003DMG402033036 Solanum tuberosum HOM05D006304 ORTHO05D008584 1.7e-37 161.8 103 76.7
Actinidia28212 Actinidia chinensis HOM05D006304 ORTHO05D008584 1.8e-34 151.8 186 46.8
QL10p015692 Quercus lobata HOM05D006304 ORTHO05D008584 1.6e-27 128.6 100 65.0
Lalb_Chr12g0196731 Lupinus albus HOM05D006304 ORTHO05D008584 1.4e-15 89.0 81 59.3
QL10p015689 Quercus lobata HOM05D006304 ORTHO05D008584 7.3e-12 76.6 72 56.9
CSS0027196 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 6.8e-10 70.1 71 53.5
Dinv19922 Davidia involucrata HOM05D006304 ORTHO05D008584 2.0e-09 68.6 119 44.5


User provided reference genes

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