Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g09679 Brassica carinata HOM05D003880 ORTHO05D019999 1.2e-52 209.5 102 100.0
BcaB07g33153 Brassica carinata HOM05D003880 ORTHO05D019999 2.9e-43 178.3 86 100.0
BcaB03g14926 Brassica carinata HOM05D003880 ORTHO05D004959 1.7e-38 162.5 163 57.7
A07p38210 Brassica napus HOM05D003880 ORTHO05D004959 5.3e-37 157.5 163 55.2
BraA07t31387Z Brassica rapa HOM05D003880 ORTHO05D004959 3.5e-36 154.8 164 55.5
BcaC08g46654 Brassica carinata HOM05D003880 ORTHO05D004959 1.0e-35 153.3 164 54.9
C06p46140 Brassica napus HOM05D003880 ORTHO05D004959 1.0e-35 153.3 164 54.9
BolC6t39667H Brassica oleracea HOM05D003880 ORTHO05D004959 1.0e-35 153.3 164 54.9
BcaC03g15327 Brassica carinata HOM05D003880 ORTHO05D004959 3.8e-35 151.4 168 54.8
C02p29320 Brassica napus HOM05D003880 ORTHO05D004959 3.8e-35 151.4 168 54.8
BolC2t08983H Brassica oleracea HOM05D003880 ORTHO05D004959 3.8e-35 151.4 168 54.8
Sp5g27110 Schrenkiella parvula HOM05D003880 ORTHO05D004959 8.5e-35 150.2 167 54.5
A02p17640 Brassica napus HOM05D003880 ORTHO05D004959 1.1e-34 149.8 168 54.2
BraA02t06810Z Brassica rapa HOM05D003880 ORTHO05D004959 1.1e-34 149.8 168 54.2
BcaB05g24701 Brassica carinata HOM05D003880 ORTHO05D004959 1.2e-33 146.4 167 53.3
Thhalv10018309m.g Eutrema salsugineum HOM05D003880 ORTHO05D004959 1.8e-32 142.5 167 52.1
CARHR064840 Cardamine hirsuta HOM05D003880 ORTHO05D004959 1.7e-30 136.0 166 50.6
Carub.0002s1882 Capsella rubella HOM05D003880 ORTHO05D004959 4.1e-29 131.3 167 49.7
AT1G72040 Arabidopsis thaliana HOM05D003880 ORTHO05D004959 1.3e-27 126.3 167 48.5
AL2G31670 Arabidopsis lyrata HOM05D003880 ORTHO05D004959 6.5e-27 124.0 167 47.3
BcaB05g25101 Brassica carinata HOM05D003880 ORTHO05D019999 1.6e-25 119.4 89 69.7
Carub.0001s2216 Capsella rubella HOM05D003880 ORTHO05D004959 6.8e-24 114.0 171 43.3
TAR624G0155 Trochodendron aralioides HOM05D003880 ORTHO05D004959 6.8e-24 114.0 105 61.0
Aa31LG4G10790 Aethionema arabicum HOM05D003880 ORTHO05D004959 2.0e-23 112.5 172 42.4
BolC8t50393H Brassica oleracea HOM05D003880 ORTHO05D004959 1.1e-21 106.7 74 75.7
Nitab4.5_0003010g0030 Nicotiana tabacum HOM05D003880 ORTHO05D004959 1.4e-21 106.3 130 50.0
COL.COLO4_12797 Corchorus olitorius HOM05D003880 ORTHO05D004959 1.8e-21 105.9 166 40.4
QL09p004950 Quercus lobata HOM05D003880 ORTHO05D004959 5.4e-21 104.4 89 59.6
Thecc.08G186500 Theobroma cacao HOM05D003880 ORTHO05D004959 9.2e-21 103.6 167 40.7
CiPaw.03G019400 Carya illinoinensis HOM05D003880 ORTHO05D004959 1.2e-20 103.2 87 59.8
Dinv02585 Davidia involucrata HOM05D003880 ORTHO05D004959 1.2e-20 103.2 90 61.1
Aa31LG7G6540 Aethionema arabicum HOM05D003880 ORTHO05D004959 1.6e-20 102.8 163 41.1
Gorai.006G130000 Gossypium raimondii HOM05D003880 ORTHO05D004959 1.6e-20 102.8 167 40.1
VMungo1080G1836 Vigna mungo HOM05D003880 ORTHO05D004959 1.6e-20 102.8 92 60.9
Glyma.06G324700 Glycine max HOM05D003880 ORTHO05D004959 2.0e-20 102.4 163 40.5
THA.LOC104800120 Tarenaya hassleriana HOM05D003880 ORTHO05D004959 2.7e-20 102.1 100 55.0
Atru.chr13.2392 Acer truncatum HOM05D003880 ORTHO05D004959 3.5e-20 101.7 168 39.9
Actinidia23014 Actinidia chinensis HOM05D003880 ORTHO05D004959 4.5e-20 101.3 91 57.1
Cpa.g.sc66.21 Carica papaya HOM05D003880 ORTHO05D004959 4.5e-20 101.3 169 40.8
Gohir.A09G115400 Gossypium hirsutum HOM05D003880 ORTHO05D004959 4.5e-20 101.3 167 39.5
Cfa008134 Carpinus fangiana HOM05D003880 ORTHO05D004959 7.8e-20 100.5 87 62.1
Phvul.005G000500 Phaseolus vulgaris HOM05D003880 ORTHO05D004959 7.8e-20 100.5 92 59.8
Rhsim06G0088000 Rhododendron simsii HOM05D003880 ORTHO05D004959 7.8e-20 100.5 91 57.1
TAR628G0517 Trochodendron aralioides HOM05D003880 ORTHO05D004959 7.8e-20 100.5 89 61.8
Gohir.D09G112200 Gossypium hirsutum HOM05D003880 ORTHO05D004959 1.0e-19 100.1 167 39.5
Lj3g0009516 Lotus japonicus HOM05D003880 ORTHO05D004959 1.7e-19 99.4 166 39.8
Duzib177G0936 Durio zibethinus HOM05D003880 ORTHO05D004959 2.3e-19 99.0 167 38.9
Lj7A289G27 Lonicera japonica HOM05D003880 ORTHO05D004959 2.9e-19 98.6 92 55.4
GSVIVG01012776001 Vitis vinifera HOM05D003880 ORTHO05D004959 2.9e-19 98.6 92 57.6
Hma1.2p1_0004F.1_g004030 Hydrangea macrophylla HOM05D003880 ORTHO05D004959 5.0e-19 97.8 91 56.0
Actinidia02567 Actinidia chinensis HOM05D003880 ORTHO05D004959 8.6e-19 97.1 91 54.9
BcaB08g34411 Brassica carinata HOM05D003880 ORTHO05D004959 1.1e-18 96.7 132 48.5
CiPaw.04G012900 Carya illinoinensis HOM05D003880 ORTHO05D004959 1.1e-18 96.7 89 56.2
Peaxi162Scf00391g00533 Petunia axillaris HOM05D003880 ORTHO05D004959 1.1e-18 96.7 89 59.6
Lsat_1_v5_gn_1_10140 Lactuca sativa HOM05D003880 ORTHO05D004959 1.5e-18 96.3 86 59.3
Glyma.04G256800 Glycine max HOM05D003880 ORTHO05D004959 1.9e-18 95.9 80 61.2
arahy.Tifrunner.gnm1.ann1.9B0XDD Arachis hypogaea HOM05D003880 ORTHO05D004959 2.5e-18 95.5 91 53.8
Duzib116G0170 Durio zibethinus HOM05D003880 ORTHO05D004959 2.5e-18 95.5 167 38.3
Nn5g27605 Nelumbo nucifera HOM05D003880 ORTHO05D004959 3.3e-18 95.1 89 56.2
vmacro12476 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 3.3e-18 95.1 169 39.6
Ciclev10000797m.g Citrus clementina HOM05D003880 ORTHO05D004959 4.3e-18 94.7 167 39.5
DCAR_001082 Daucus carota HOM05D003880 ORTHO05D004959 5.6e-18 94.4 86 54.7
Lj4A481T13 Lonicera japonica HOM05D003880 ORTHO05D004959 5.6e-18 94.4 94 56.4
Os01g0874100 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 5.6e-18 94.4 86 58.1
TWI14G0176 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 7.3e-18 94.0 90 56.7
Eucgr.F02584 Eucalyptus grandis HOM05D003880 ORTHO05D004959 9.5e-18 93.6 89 56.2
HanXRQChr09g0260531 Helianthus annuus HOM05D003880 ORTHO05D004959 1.2e-17 93.2 168 38.7
TWI59G0907 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 1.2e-17 93.2 90 56.7
vmacro00757 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 1.2e-17 93.2 86 55.8
arahy.Tifrunner.gnm1.ann1.HC95SM Arachis hypogaea HOM05D003880 ORTHO05D004959 1.6e-17 92.8 91 52.7
SalBow6G4536 Salvia bowleyana HOM05D003880 ORTHO05D004959 1.6e-17 92.8 166 39.2
SalBow6G5395 Salvia bowleyana HOM05D003880 ORTHO05D004959 1.6e-17 92.8 166 39.2
Sc23g0001360 Simmondsia chinensis HOM05D003880 ORTHO05D004959 2.1e-17 92.4 91 50.5
ClCG08G000380 Citrullus lanatus HOM05D003880 ORTHO05D004959 2.8e-17 92.0 90 56.7
Cc00_g06530 Coffea canephora HOM05D003880 ORTHO05D004959 2.8e-17 92.0 90 55.6
Lalb_Chr09g0332911 Lupinus albus HOM05D003880 ORTHO05D004959 2.8e-17 92.0 92 54.3
Nitab4.5_0000167g0290 Nicotiana tabacum HOM05D003880 ORTHO05D004959 2.8e-17 92.0 90 56.7
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 4.7e-17 91.3 82 57.3
MD10G1100400 Malus domestica HOM05D003880 ORTHO05D004959 4.7e-17 91.3 93 54.8
DCAR_011525 Daucus carota HOM05D003880 ORTHO05D004959 6.1e-17 90.9 88 56.8
Lsat_1_v5_gn_4_136101 Lactuca sativa HOM05D003880 ORTHO05D004959 6.1e-17 90.9 90 56.7
MD05G1093300 Malus domestica HOM05D003880 ORTHO05D004959 6.1e-17 90.9 92 56.5
Actinidia03514 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.0e-16 90.1 85 56.5
Lalb_Chr05g0224761 Lupinus albus HOM05D003880 ORTHO05D004959 1.4e-16 89.7 92 54.3
MBI17_g21473_MAGBIO Magnolia biondii HOM05D003880 ORTHO05D004959 1.4e-16 89.7 87 56.3
Os05g0430200 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 1.4e-16 89.7 86 53.5
Medtr3g005360 Medicago truncatula HOM05D003880 ORTHO05D004959 1.8e-16 89.4 87 52.9
Oeu021226.1 Olea europaea HOM05D003880 ORTHO05D019999 2.3e-16 89.0 91 51.6
Ca_13965_v3 Cicer arietinum L. HOM05D003880 ORTHO05D004959 5.2e-16 87.8 87 52.9
Migut.N03362 Erythranthe guttata HOM05D003880 ORTHO05D004959 5.2e-16 87.8 92 52.2
Migut.O00683 Erythranthe guttata HOM05D003880 ORTHO05D004959 5.2e-16 87.8 92 52.2
Solyc11g020780.2 Solanum lycopersicum HOM05D003880 ORTHO05D004959 6.8e-16 87.4 94 54.3
Sopen11g010860 Solanum pennellii HOM05D003880 ORTHO05D004959 6.8e-16 87.4 94 54.3
PGR042G0805 Punica granatum HOM05D003880 ORTHO05D004959 8.9e-16 87.0 87 56.3
Aqoxy4G01178 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 1.5e-15 86.3 89 51.7
CAN.G259.4 Capsicum annuum HOM05D003880 ORTHO05D004959 1.5e-15 86.3 88 55.7
PGSC0003DMG400009278 Solanum tuberosum HOM05D003880 ORTHO05D004959 1.5e-15 86.3 94 53.2
Psat1g000520 Pisum sativum HOM05D003880 ORTHO05D004959 2.0e-15 85.9 90 51.1
Prupe.1G551200 Prunus persica HOM05D003880 ORTHO05D004959 2.0e-15 85.9 93 54.8
CANSAT11G2580 Cannabis sativa HOM05D003880 ORTHO05D004959 2.6e-15 85.5 91 49.5
ATR0661G349 Amborella trichopoda HOM05D003880 ORTHO05D004959 4.4e-15 84.7 101 52.5
CDE04G1100 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 7.5e-15 84.0 88 51.1
Migut.C01288 Erythranthe guttata HOM05D003880 ORTHO05D004959 7.5e-15 84.0 92 50.0
TPR.G25498 Trifolium pratense HOM05D003880 ORTHO05D004959 9.8e-15 83.6 90 50.0
SGA_v2.0_scaffold149G36569 Striga asiatica HOM05D003880 ORTHO05D004959 1.3e-14 83.2 91 51.6
CsaV3_5G040400 Cucumis sativus L. HOM05D003880 ORTHO05D004959 2.2e-14 82.4 90 51.1
Manes.02G194600 Manihot esculenta HOM05D003880 ORTHO05D004959 2.9e-14 82.0 88 50.0
MELO3C022212.2 Cucumis melo HOM05D003880 ORTHO05D004959 3.7e-14 81.6 90 51.1
HanXRQChr11g0326071 Helianthus annuus HOM05D003880 ORTHO05D004959 4.9e-14 81.3 162 37.0
Oeu025391.1 Olea europaea HOM05D003880 ORTHO05D004959 4.9e-14 81.3 166 35.5
Zm00001eb146250 Zea mays HOM05D003880 ORTHO05D004959 4.9e-14 81.3 91 48.4
CDE04G1048 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 6.4e-14 80.9 85 50.6
AUR62004625 Chenopodium quinoa HOM05D003880 ORTHO05D004959 1.1e-13 80.1 88 47.7
FAN08G3431 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.1e-13 80.1 90 52.2
Zm00001eb348750 Zea mays HOM05D003880 ORTHO05D004959 1.1e-13 80.1 87 51.7
PSO017G2071 Papaver somniferum HOM05D003880 ORTHO05D004959 1.4e-13 79.7 90 48.9
PSO063G4997 Papaver somniferum HOM05D003880 ORTHO05D004959 1.4e-13 79.7 90 48.9
FvH4_5g32350 Fragaria vesca HOM05D003880 ORTHO05D004959 1.8e-13 79.3 89 51.7
FAN04G0842 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.8e-13 79.3 89 51.7
FAN13G2674 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.8e-13 79.3 89 51.7
FAN18G3221 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.8e-13 79.3 89 51.7
Manes.18G103500 Manihot esculenta HOM05D003880 ORTHO05D004959 3.2e-13 78.6 89 47.2
SalBow7G4466 Salvia bowleyana HOM05D003880 ORTHO05D004959 3.2e-13 78.6 89 49.4
AUR62023520 Chenopodium quinoa HOM05D003880 ORTHO05D004959 4.1e-13 78.2 88 47.7
HPP92_027628 Vanilla planifolia HOM05D003880 ORTHO05D019999 5.4e-13 77.8 80 51.2
unitig_747.g21476 Utricularia gibba HOM05D003880 ORTHO05D004959 9.2e-13 77.0 90 46.7
RcHm_v2.0_Chr7g0228851 Rosa chinensis HOM05D003880 ORTHO05D004959 1.2e-12 76.6 90 51.1
Aqoxy7G03411 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 1.6e-12 76.3 91 46.2
Potri.019G081600 Populus trichocarpa HOM05D003880 ORTHO05D004959 1.6e-12 76.3 87 47.1
Ah.05g178350 Amaranthus hybridus HOM05D003880 ORTHO05D004959 3.5e-12 75.1 150 36.7
SGA_v2.0_scaffold118G32535 Striga asiatica HOM05D003880 ORTHO05D004959 4.6e-12 74.7 87 48.3
Potri.013G109400 Populus trichocarpa HOM05D003880 ORTHO05D004959 6.0e-12 74.3 90 47.8
HPP92_019380 Vanilla planifolia HOM05D003880 ORTHO05D004959 6.0e-12 74.3 92 45.7
SGA_v2.0_scaffold24G10581 Striga asiatica HOM05D003880 ORTHO05D004959 7.8e-12 73.9 166 33.7
Sabra19G0093200 Salix brachista HOM05D003880 ORTHO05D004959 1.3e-11 73.2 87 46.0
Dinv41735 Davidia involucrata HOM05D003880 ORTHO05D004959 5.0e-11 71.2 114 41.2
MSTRG.1545 Avicennia marina HOM05D003880 ORTHO05D004959 1.1e-10 70.1 91 47.3
Hund16787 Selenicereus undatus HOM05D003880 ORTHO05D004959 1.1e-10 70.1 90 41.1
EL10Ac1g00108 Beta vulgaris HOM05D003880 ORTHO05D004959 1.9e-10 69.3 87 43.7
SEGI_26933 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 3.3e-10 68.6 78 47.4
Actinidia05639 Actinidia chinensis HOM05D003880 ORTHO05D004959 9.5e-10 67.0 37 81.1
Lsat_1_v5_gn_1_10160 Lactuca sativa HOM05D003880 ORTHO05D019999 9.5e-10 67.0 43 74.4
Mapoly0028s0143 Marchantia polymorpha HOM05D003880 ORTHO05D004959 1.6e-09 66.2 80 45.0
Sabra13G0094300 Salix brachista HOM05D003880 ORTHO05D004959 2.8e-09 65.5 88 42.0
unitig_0.g2129 Utricularia gibba HOM05D003880 ORTHO05D004959 3.6e-09 65.1 39 71.8
Pp3c12_15090 Physcomitrium patens HOM05D003880 ORTHO05D004959 8.0e-09 63.9 81 40.7
SEGI_09673 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 8.0e-09 63.9 37 75.7
BolC5t31452H Brassica oleracea HOM05D003880 ORTHO05D004959 2.3e-08 62.4 32 90.6
BraA02t08014Z Brassica rapa HOM05D003880 ORTHO05D004959 2.3e-08 62.4 109 39.4
SHI35657 Sapria himalayana HOM05D003880 ORTHO05D004959 7.5e-07 57.4 39 69.2
CDE04G1975 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 8.3e-06 53.9 36 63.9


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