Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g09583 Brassica carinata HOM05D002361 ORTHO05D090656 4.2e-34 147.5 78 100.0
BcaC01g02401 Brassica carinata HOM05D002361 ORTHO05D002843 2.6e-07 58.5 58 67.2
C03p65680 Brassica napus HOM05D002361 ORTHO05D002843 2.6e-07 58.5 58 67.2
BolC3t18821H Brassica oleracea HOM05D002361 ORTHO05D002843 2.6e-07 58.5 58 67.2
BcaB01g00726 Brassica carinata HOM05D002361 ORTHO05D002843 7.5e-07 57.0 58 65.5
CARHR158250 Cardamine hirsuta HOM05D002361 ORTHO05D002843 7.5e-07 57.0 58 65.5
Thhalv10010332m.g Eutrema salsugineum HOM05D002361 ORTHO05D002843 7.5e-07 57.0 58 65.5
RcHm_v2.0_Chr7g0186771 Rosa chinensis HOM05D002361 ORTHO05D002843 1.3e-06 56.2 69 56.5
Aa31LG4G17870 Aethionema arabicum HOM05D002361 ORTHO05D002843 2.2e-06 55.5 58 63.8
FAN04G3076 Fragaria x ananassa HOM05D002361 ORTHO05D002843 2.2e-06 55.5 72 52.8
AL5G29060 Arabidopsis lyrata HOM05D002361 ORTHO05D002843 2.9e-06 55.1 58 63.8
Carub.0005s1555 Capsella rubella HOM05D002361 ORTHO05D002843 2.9e-06 55.1 58 63.8
Sp5g12760 Schrenkiella parvula HOM05D002361 ORTHO05D002843 2.9e-06 55.1 58 63.8
AT3G49310 Arabidopsis thaliana HOM05D002361 ORTHO05D002843 4.9e-06 54.3 58 63.8
FvH4_5g11030 Fragaria vesca HOM05D002361 ORTHO05D002843 4.9e-06 54.3 56 62.5
FAN08G1635 Fragaria x ananassa HOM05D002361 ORTHO05D002843 4.9e-06 54.3 56 62.5
FAN13G2365 Fragaria x ananassa HOM05D002361 ORTHO05D002843 4.9e-06 54.3 56 62.5
FAN18G3417 Fragaria x ananassa HOM05D002361 ORTHO05D002843 4.9e-06 54.3 56 62.5
CARHR189070 Cardamine hirsuta HOM05D002361 ORTHO05D002843 6.4e-06 53.9 58 62.1
Ca_16736_v3 Cicer arietinum L. HOM05D002361 ORTHO05D002843 6.4e-06 53.9 69 53.6
THA.LOC104814941 Tarenaya hassleriana HOM05D002361 ORTHO05D002843 6.4e-06 53.9 56 62.5
Cc02_g01140 Coffea canephora HOM05D002361 ORTHO05D002843 8.3e-06 53.5 56 62.5
ECA238G3348 Erigeron canadensis HOM05D002361 ORTHO05D002843 8.3e-06 53.5 56 60.7
HanXRQChr04g0100431 Helianthus annuus HOM05D002361 ORTHO05D002843 8.3e-06 53.5 56 60.7
Pp3c24_4810 Physcomitrium patens HOM05D002361 ORTHO05D002843 8.3e-06 53.5 56 58.9
SEGI_40998 Sequoiadendron giganteum HOM05D002361 ORTHO05D002843 8.3e-06 53.5 58 62.1
TWI60G0490 Tripterygium wilfordii HOM05D002361 ORTHO05D002843 8.3e-06 53.5 58 60.3


User provided reference genes

Program Settings