Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g09474 Brassica carinata HOM05D000475 ORTHO05D000343 9.8e-127 456.8 234 100.0
BolC4t22959H Brassica oleracea HOM05D000475 ORTHO05D000343 5.1e-83 311.6 230 74.3
A05p10600 Brassica napus HOM05D000475 ORTHO05D000343 6.6e-83 311.2 230 73.9
BcaB02g09475 Brassica carinata HOM05D000475 ORTHO05D000343 1.3e-81 307.0 230 73.5
BraA05t20000Z Brassica rapa HOM05D000475 ORTHO05D000343 1.3e-81 307.0 230 73.5
C04p13700 Brassica napus HOM05D000475 ORTHO05D000343 3.6e-81 305.4 230 73.0
Sp4g17370 Schrenkiella parvula HOM05D000475 ORTHO05D000343 9.3e-61 237.7 255 55.3
AL4G31150 Arabidopsis lyrata HOM05D000475 ORTHO05D000343 1.3e-54 217.2 245 54.7
AT2G35140 Arabidopsis thaliana HOM05D000475 ORTHO05D000343 1.7e-54 216.9 211 59.7
Thhalv10016310m.g Eutrema salsugineum HOM05D000475 ORTHO05D000343 3.6e-52 209.1 257 52.1
Aa31LG9G16080 Aethionema arabicum HOM05D000475 ORTHO05D000343 2.5e-50 203.0 228 54.8
Carub.0004s1682 Capsella rubella HOM05D000475 ORTHO05D000343 7.9e-44 181.4 287 41.8
THA.LOC104814360 Tarenaya hassleriana HOM05D000475 ORTHO05D000343 3.1e-24 116.3 153 47.7


User provided reference genes

Program Settings