Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g09328 Brassica carinata HOM05D006897 ORTHO05D008825 4.4e-65 251.1 126 100.0
BcaC02g11805 Brassica carinata HOM05D006897 ORTHO05D008825 8.3e-64 246.9 126 96.8
C04p11190 Brassica napus HOM05D006897 ORTHO05D008825 8.3e-64 246.9 126 96.8
BolC4t22765H Brassica oleracea HOM05D006897 ORTHO05D008825 8.3e-64 246.9 126 96.8
Sp4g19090 Schrenkiella parvula HOM05D006897 ORTHO05D008825 1.6e-62 242.7 126 96.8
A05p09040 Brassica napus HOM05D006897 ORTHO05D008825 2.0e-62 242.3 126 96.8
BraA05t19865Z Brassica rapa HOM05D006897 ORTHO05D008825 2.0e-62 242.3 126 96.8
Thhalv10017426m.g Eutrema salsugineum HOM05D006897 ORTHO05D008825 7.7e-62 240.4 126 95.2
Carub.0004s1868 Capsella rubella HOM05D006897 ORTHO05D008825 1.5e-60 236.1 126 92.9
CARHR131290 Cardamine hirsuta HOM05D006897 ORTHO05D008825 1.9e-60 235.7 128 89.8
AT2G36835 Arabidopsis thaliana HOM05D006897 ORTHO05D008825 9.5e-60 233.4 126 92.1
AL4G33030 Arabidopsis lyrata HOM05D006897 ORTHO05D008825 2.8e-59 231.9 126 91.3
Prupe.7G126900 Prunus persica HOM05D006897 ORTHO05D008825 1.7e-48 196.1 122 71.3
TWI74G0074 Tripterygium wilfordii HOM05D006897 ORTHO05D008825 2.9e-48 195.3 126 73.0
Manes.08G012300 Manihot esculenta HOM05D006897 ORTHO05D008825 4.9e-48 194.5 126 71.4
Aa31LG5G22050 Aethionema arabicum HOM05D006897 ORTHO05D008825 2.4e-47 192.2 109 87.2
Potri.006G122200 Populus trichocarpa HOM05D006897 ORTHO05D008825 5.4e-47 191.0 127 66.9
Gohir.A11G323600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 7.0e-47 190.7 126 70.6
Gohir.D11G342700 Gossypium hirsutum HOM05D006897 ORTHO05D008825 7.0e-47 190.7 126 70.6
Gorai.007G372800 Gossypium raimondii HOM05D006897 ORTHO05D008825 7.0e-47 190.7 126 70.6
MD12G1108500 Malus domestica HOM05D006897 ORTHO05D008825 7.0e-47 190.7 127 67.7
GSVIVG01033669001 Vitis vinifera HOM05D006897 ORTHO05D008825 7.0e-47 190.7 127 65.4
MD04G1090000 Malus domestica HOM05D006897 ORTHO05D008825 1.6e-46 189.5 128 67.2
Cpa.g.sc92.100 Carica papaya HOM05D006897 ORTHO05D008825 2.7e-46 188.7 126 68.3
COL.COLO4_26923 Corchorus olitorius HOM05D006897 ORTHO05D008825 2.7e-46 188.7 126 69.0
Atru.chr8.1762 Acer truncatum HOM05D006897 ORTHO05D008825 3.5e-46 188.3 122 68.0
Cfa017644 Carpinus fangiana HOM05D006897 ORTHO05D008825 4.6e-46 188.0 128 67.2
Ciclev10013772m.g Citrus clementina HOM05D006897 ORTHO05D008825 4.6e-46 188.0 127 66.9
RcHm_v2.0_Chr3g0470611 Rosa chinensis HOM05D006897 ORTHO05D008825 1.0e-45 186.8 128 65.6
Lsat_1_v5_gn_6_28260 Lactuca sativa HOM05D006897 ORTHO05D008825 1.3e-45 186.4 126 69.0
FAN09G4221 Fragaria x ananassa HOM05D006897 ORTHO05D008825 1.7e-45 186.0 127 66.9
FvH4_6g16650 Fragaria vesca HOM05D006897 ORTHO05D008825 3.0e-45 185.3 127 65.4
FAN05G5588 Fragaria x ananassa HOM05D006897 ORTHO05D008825 3.9e-45 184.9 127 64.6
Lalb_Chr01g0018621 Lupinus albus HOM05D006897 ORTHO05D008825 3.9e-45 184.9 130 67.7
FAN05G2962 Fragaria x ananassa HOM05D006897 ORTHO05D008825 5.0e-45 184.5 127 63.8
Sed0006529 Sechium edule HOM05D006897 ORTHO05D008825 6.6e-45 184.1 128 67.2
FAN14G2109 Fragaria x ananassa HOM05D006897 ORTHO05D008825 8.6e-45 183.7 127 64.6
Sed0016332 Sechium edule HOM05D006897 ORTHO05D008825 8.6e-45 183.7 129 66.7
arahy.Tifrunner.gnm1.ann1.12U4ZA Arachis hypogaea HOM05D006897 ORTHO05D008825 1.9e-44 182.6 129 67.4
Sabra06G0096400 Salix brachista HOM05D006897 ORTHO05D008825 3.3e-44 181.8 144 59.0
EL10Ac7g16667 Beta vulgaris HOM05D006897 ORTHO05D008825 4.3e-44 181.4 126 65.9
CiPaw.09G169900 Carya illinoinensis HOM05D006897 ORTHO05D008825 9.5e-44 180.3 128 64.8
Ca_08918_v3 Cicer arietinum L. HOM05D006897 ORTHO05D008825 9.5e-44 180.3 128 62.5
PGSC0003DMG400028283 Solanum tuberosum HOM05D006897 ORTHO05D008825 1.2e-43 179.9 123 65.9
HanXRQChr13g0400941 Helianthus annuus HOM05D006897 ORTHO05D008825 1.6e-43 179.5 129 62.8
Sopen10g033350 Solanum pennellii HOM05D006897 ORTHO05D008825 1.6e-43 179.5 123 65.0
Lj1g0004142 Lotus japonicus HOM05D006897 ORTHO05D008825 2.8e-43 178.7 131 63.4
Phvul.001G180700 Phaseolus vulgaris HOM05D006897 ORTHO05D008825 2.8e-43 178.7 129 63.6
VMungo1383G3501 Vigna mungo HOM05D006897 ORTHO05D008825 8.1e-43 177.2 129 64.3
Sc02g0001520 Simmondsia chinensis HOM05D006897 ORTHO05D008825 1.1e-42 176.8 126 63.5
Aqoxy1G01120 Aquilegia oxysepala HOM05D006897 ORTHO05D008825 1.4e-42 176.4 128 64.1
CSS0029455 Camellia sinensis var. sinensis HOM05D006897 ORTHO05D008825 1.8e-42 176.0 133 59.4
Cc06_g04460 Coffea canephora HOM05D006897 ORTHO05D008825 1.8e-42 176.0 128 60.9
Medtr7g102930 Medicago truncatula HOM05D006897 ORTHO05D008825 1.8e-42 176.0 121 63.6
TPR.G32809 Trifolium pratense HOM05D006897 ORTHO05D008825 1.8e-42 176.0 120 63.3
Hund26628 Selenicereus undatus HOM05D006897 ORTHO05D008825 2.3e-42 175.6 126 64.3
Psat3g039920 Pisum sativum HOM05D006897 ORTHO05D008825 3.1e-42 175.3 121 62.8
Eucgr.A01649 Eucalyptus grandis HOM05D006897 ORTHO05D008825 4.0e-42 174.9 126 61.9
CsaV3_3G036130 Cucumis sativus L. HOM05D006897 ORTHO05D008825 8.9e-42 173.7 128 64.1
ECA233G4308 Erigeron canadensis HOM05D000468 ORTHO05D000548 8.9e-42 173.7 124 62.9
Glyma.19G185800 Glycine max HOM05D006897 ORTHO05D008825 8.9e-42 173.7 125 63.2
AUR62026928 Chenopodium quinoa HOM05D006897 ORTHO05D008825 1.5e-41 172.9 126 65.1
Nitab4.5_0009369g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 3.4e-41 171.8 123 62.6
QL07p042737 Quercus lobata HOM05D006897 ORTHO05D008825 3.4e-41 171.8 170 51.2
AUR62041582 Chenopodium quinoa HOM05D006897 ORTHO05D008825 4.4e-41 171.4 126 64.3
Dinv35807 Davidia involucrata HOM05D006897 ORTHO05D008825 5.8e-41 171.0 127 60.6
Migut.J00586 Erythranthe guttata HOM05D006897 ORTHO05D008825 1.7e-40 169.5 126 61.1
Nitab4.5_0002626g0030 Nicotiana tabacum HOM05D000468 ORTHO05D000548 2.9e-40 168.7 132 58.3
MBI04_g13674_MAGBIO Magnolia biondii HOM05D000468 ORTHO05D000548 4.9e-40 167.9 126 60.3
unitig_27.g25382 Utricularia gibba HOM05D006897 ORTHO05D008825 8.3e-40 167.2 125 59.2
MSTRG.5772 Avicennia marina HOM05D006897 ORTHO05D008825 2.4e-39 165.6 122 59.8
Duzib093G0551 Durio zibethinus HOM05D006897 ORTHO05D008825 2.4e-39 165.6 126 60.3
Nn2g13847 Nelumbo nucifera HOM05D006897 ORTHO05D008825 2.4e-39 165.6 125 58.4
Nitab4.5_0000063g0200 Nicotiana tabacum HOM05D006897 ORTHO05D008825 7.1e-39 164.1 128 57.8
SGA_v2.0_scaffold40G15485 Striga asiatica HOM05D006897 ORTHO05D008825 7.1e-39 164.1 127 59.1
CDE05G1066 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 9.2e-39 163.7 118 61.9
ClCG10G019960 Citrullus lanatus HOM05D006897 ORTHO05D008825 1.6e-38 162.9 136 58.8
Solyc10g083910.3 Solanum lycopersicum HOM05D006897 ORTHO05D008825 2.1e-38 162.5 105 66.7
TAR623G0762 Trochodendron aralioides HOM05D000468 ORTHO05D000548 2.1e-38 162.5 118 60.2
PSO339G3187 Papaver somniferum HOM05D006897 ORTHO05D008825 2.7e-38 162.2 128 57.8
PSO063G5108 Papaver somniferum HOM05D006897 ORTHO05D008825 3.5e-38 161.8 128 58.6
CDE02G4617 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 4.6e-38 161.4 118 61.9
MELO3C009375.2 Cucumis melo HOM05D006897 ORTHO05D008825 4.6e-38 161.4 144 57.6
Nn6g35243 Nelumbo nucifera HOM05D006897 ORTHO05D008825 4.6e-38 161.4 124 58.1
HPP92_010447 Vanilla planifolia HOM05D006897 ORTHO05D008825 4.6e-38 161.4 118 60.2
Medtr0050s0130 Medicago truncatula HOM05D006897 ORTHO05D008825 1.3e-37 159.8 122 59.0
Oeu041483.1 Olea europaea HOM05D006897 ORTHO05D008825 1.2e-33 146.7 110 57.3
Nitab4.5_0000527g0030 Nicotiana tabacum HOM05D006897 ORTHO05D008825 4.4e-33 144.8 106 59.4
HPP92_010241 Vanilla planifolia HOM05D006897 ORTHO05D008825 5.8e-33 144.4 102 61.8
Gohir.D04G109600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 7.6e-33 144.1 110 59.1
Glyma.03G185300 Glycine max HOM05D006897 ORTHO05D008825 9.9e-33 143.7 108 60.2
Zm00001eb369960 Zea mays HOM05D006897 ORTHO05D008825 8.4e-32 140.6 123 52.8
Zm00001eb151640 Zea mays HOM05D006897 ORTHO05D008825 1.4e-31 139.8 123 52.8
Gorai.009G413700 Gossypium raimondii HOM05D006897 ORTHO05D008825 1.6e-30 136.3 110 57.3
HanXRQChr13g0388291 Helianthus annuus HOM05D006897 ORTHO05D008825 4.6e-30 134.8 97 61.9
Thecc.05G070500 Theobroma cacao HOM05D006897 ORTHO05D008825 4.6e-30 134.8 126 54.8
Os01g0776700 Oryza sativa ssp. japonica HOM05D006897 ORTHO05D008825 6.0e-30 134.4 105 57.1
AagrBONN_evm.TU.Sc2ySwM_228.4541 Anthoceros agrestis HOM05D006897 ORTHO05D008825 1.0e-29 133.7 127 49.6
AagrBONN_evm.TU.Sc2ySwM_340.262 Anthoceros agrestis HOM05D006897 ORTHO05D008825 1.7e-29 132.9 127 49.6
Mapoly0013s0170 Marchantia polymorpha HOM05D006897 ORTHO05D008825 1.5e-28 129.8 129 49.6
Duzib106G0008 Durio zibethinus HOM05D006897 ORTHO05D008825 1.6e-27 126.3 77 71.4
SEGI_02421 Sequoiadendron giganteum HOM05D006897 ORTHO05D008825 3.6e-27 125.2 105 54.3
Dinv37330 Davidia involucrata HOM05D006897 ORTHO05D000180 6.2e-27 124.4 90 57.8
Rhsim04G0141800 Rhododendron simsii HOM05D006897 ORTHO05D008825 1.2e-25 120.2 79 64.6
Haze_20509 Corylus avellana HOM05D006897 ORTHO05D008825 2.0e-25 119.4 89 60.7
SMO134G0180 Selaginella moellendorffii HOM05D006897 ORTHO05D008825 7.6e-25 117.5 127 44.9
Pp3c2_31470 Physcomitrium patens HOM05D006897 ORTHO05D008825 6.4e-24 114.4 114 47.4
SalBow3G3382 Salvia bowleyana HOM05D006897 ORTHO05D008825 6.6e-21 104.4 130 39.2
Peaxi162Scf00311g01426 Petunia axillaris HOM05D006897 ORTHO05D008825 1.5e-20 103.2 89 48.3
Actinidia32484 Actinidia chinensis HOM05D006897 ORTHO05D008825 2.5e-20 102.4 66 60.6
Lj3A989T53 Lonicera japonica HOM05D006897 ORTHO05D008825 1.6e-19 99.8 96 46.9
Peaxi162Scf00658g00012 Petunia axillaris HOM05D006897 ORTHO05D008825 3.4e-17 92.0 124 44.4
HPP92_010165 Vanilla planifolia HOM05D006897 ORTHO05D008825 5.8e-17 91.3 63 61.9
arahy.Tifrunner.gnm1.ann1.Y93F21 Arachis hypogaea HOM05D006897 ORTHO05D008825 1.4e-15 86.7 129 41.9
Sabra16G0184400 Salix brachista HOM05D004505 ORTHO05D005249 1.5e-09 66.6 43 62.8
Actinidia31321 Actinidia chinensis HOM05D006897 ORTHO05D008825 4.9e-08 61.6 58 51.7
Sabra04G0106300 Salix brachista HOM05D006897 ORTHO05D008825 4.9e-08 61.6 39 61.5
Nitab4.5_0003762g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 6.4e-08 61.2 61 47.5
Rhsim04G0141900 Rhododendron simsii HOM05D006897 ORTHO05D008825 7.1e-07 57.8 50 60.0


User provided reference genes

Program Settings