Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g09156 Brassica carinata HOM05D008140 ORTHO05D009650 8.2e-98 360.5 201 100.0
BcaB02g09155 Brassica carinata HOM05D008140 ORTHO05D009650 9.1e-97 357.1 199 100.0
BolC4t22473H Brassica oleracea HOM05D008140 ORTHO05D009650 1.0e-87 327.0 200 91.5
BcaC02g12023 Brassica carinata HOM05D008140 ORTHO05D009650 2.2e-87 325.9 205 90.7
C04p08800 Brassica napus HOM05D008140 ORTHO05D009650 2.9e-87 325.5 205 90.7
A05p07360 Brassica napus HOM05D008140 ORTHO05D009650 2.7e-85 318.9 205 89.3
BraA05t19701Z Brassica rapa HOM05D008140 ORTHO05D009650 2.7e-85 318.9 205 89.3
A05p07380 Brassica napus HOM05D008140 ORTHO05D009650 1.7e-82 309.7 193 91.2
BraA05t19703Z Brassica rapa HOM05D008140 ORTHO05D009650 1.7e-82 309.7 193 91.2
Sp4g21180 Schrenkiella parvula HOM05D008140 ORTHO05D009650 3.5e-72 275.4 221 78.3
AL4G36090 Arabidopsis lyrata HOM05D008140 ORTHO05D009650 9.4e-70 267.3 212 73.6
Carub.0004s2081 Capsella rubella HOM05D008140 ORTHO05D009650 2.7e-64 249.2 211 71.6
AT2G38790 Arabidopsis thaliana HOM05D008140 ORTHO05D009650 2.3e-63 246.1 216 69.9
A03p21600 Brassica napus HOM05D008140 ORTHO05D009650 1.6e-61 240.0 215 64.7
BraA03t11396Z Brassica rapa HOM05D008140 ORTHO05D009650 1.6e-61 240.0 215 64.7
C03p25590 Brassica napus HOM05D008140 ORTHO05D009650 1.4e-60 236.9 208 69.2
BolC3t14947H Brassica oleracea HOM05D008140 ORTHO05D009650 2.3e-60 236.1 208 69.2
CARHR133500 Cardamine hirsuta HOM05D008140 ORTHO05D009650 1.5e-59 233.4 217 61.8
THA.LOC104803169 Tarenaya hassleriana HOM05D008140 ORTHO05D009650 7.1e-33 144.8 203 45.3
AL4G20280 Arabidopsis lyrata HOM05D008140 ORTHO05D009650 1.6e-29 133.7 171 50.9
C03p25610 Brassica napus HOM05D008140 ORTHO05D009650 1.9e-22 110.2 118 58.5
BolC3t14949H Brassica oleracea HOM05D008140 ORTHO05D009650 1.9e-22 110.2 118 58.5
A03p21630 Brassica napus HOM05D008140 ORTHO05D009650 1.2e-21 107.5 118 60.2
BraA03t11398Z Brassica rapa HOM05D008140 ORTHO05D009650 1.2e-21 107.5 118 60.2
THA.LOC104803183 Tarenaya hassleriana HOM05D008140 ORTHO05D009650 1.5e-14 84.0 102 52.0
Thecc.10G110900 Theobroma cacao HOM05D008140 ORTHO05D009650 1.9e-14 83.6 155 38.7
Potri.010G235400 Populus trichocarpa HOM05D008140 ORTHO05D009650 7.3e-14 81.6 164 36.0
Duzib106G0172 Durio zibethinus HOM05D008140 ORTHO05D009650 1.6e-13 80.5 146 38.4
MD07G1068400 Malus domestica HOM05D008140 ORTHO05D009650 1.4e-12 77.4 143 37.8
Prupe.2G086100 Prunus persica HOM05D008140 ORTHO05D009650 1.8e-12 77.0 166 36.1
Sabra10G0182500 Salix brachista HOM05D008140 ORTHO05D009650 9.0e-12 74.7 156 35.9
Haze_02596 Corylus avellana HOM05D008140 ORTHO05D009650 4.5e-11 72.4 174 36.2
COL.COLO4_06812 Corchorus olitorius HOM05D008140 ORTHO05D009650 5.8e-11 72.0 128 38.3
FAN01G1993 Fragaria x ananassa HOM05D008140 ORTHO05D009650 1.7e-10 70.5 159 34.6
Cpa.g.sc19.24 Carica papaya HOM05D008140 ORTHO05D009650 2.2e-10 70.1 96 42.7
FvH4_7g05940 Fragaria vesca HOM05D008140 ORTHO05D009650 2.9e-10 69.7 135 37.0
FAN03G1479 Fragaria x ananassa HOM05D008140 ORTHO05D009650 2.9e-10 69.7 135 36.3
FAN06G2722 Fragaria x ananassa HOM05D008140 ORTHO05D009650 2.9e-10 69.7 135 37.0
Potri.008G025100 Populus trichocarpa HOM05D008140 ORTHO05D009650 2.9e-10 69.7 164 34.8
RcHm_v2.0_Chr1g0333141 Rosa chinensis HOM05D008140 ORTHO05D009650 2.9e-10 69.7 163 35.0
Cfa011233 Carpinus fangiana HOM05D008140 ORTHO05D009650 3.8e-10 69.3 160 36.9
Cfa011234 Carpinus fangiana HOM05D008140 ORTHO05D009650 6.4e-10 68.6 181 35.4
Lalb_Chr06g0170171 Lupinus albus HOM05D008140 ORTHO05D009650 6.4e-10 68.6 137 36.5
Potri.008G025200 Populus trichocarpa HOM05D008140 ORTHO05D009650 8.4e-10 68.2 164 34.1
RcHm_v2.0_Chr1g0333151 Rosa chinensis HOM05D008140 ORTHO05D009650 1.1e-09 67.8 144 34.7
FAN10G4346 Fragaria x ananassa HOM05D008140 ORTHO05D009650 1.4e-09 67.4 135 36.3
Sabra08G0016900 Salix brachista HOM05D008140 ORTHO05D009650 1.4e-09 67.4 177 32.2
CiPaw.13G036800 Carya illinoinensis HOM05D008140 ORTHO05D009650 5.1e-07 58.9 160 34.4
QL04p042101 Quercus lobata HOM05D008140 ORTHO05D009650 1.1e-06 57.8 166 30.1
TWI38G0562 Tripterygium wilfordii HOM05D008140 ORTHO05D009650 1.1e-06 57.8 148 31.8
Ciclev10033301m.g Citrus clementina HOM05D008140 ORTHO05D009650 3.3e-06 56.2 159 33.3
Haze_02595 Corylus avellana HOM05D008140 ORTHO05D009650 4.3e-06 55.8 175 32.0
Manes.07G090200 Manihot esculenta HOM05D008140 ORTHO05D009650 5.6e-06 55.5 104 38.5


User provided reference genes

Program Settings