Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g09145 Brassica carinata HOM05D003864 ORTHO05D004658 1.8e-190 669.1 336 100.0
A05p07200 Brassica napus HOM05D003864 ORTHO05D004658 3.0e-177 625.2 338 94.1
BcaC02g12038 Brassica carinata HOM05D003864 ORTHO05D004658 6.9e-174 614.0 339 93.2
BraA05t19685Z Brassica rapa HOM05D003864 ORTHO05D004658 3.8e-172 608.2 351 89.7
C04p08610 Brassica napus HOM05D003864 ORTHO05D004658 1.0e-169 600.1 344 91.0
BolC4t22455H Brassica oleracea HOM05D005803 ORTHO05D008090 2.4e-166 589.0 326 92.9
A03p21870 Brassica napus HOM05D003864 ORTHO05D004658 4.0e-166 588.2 363 82.9
C03p25940 Brassica napus HOM05D003864 ORTHO05D004658 1.2e-165 586.6 351 86.3
BraA03t11423Z Brassica rapa HOM05D003864 ORTHO05D004658 9.9e-165 583.6 364 82.7
BcaB01g03648 Brassica carinata HOM05D003864 ORTHO05D004658 7.9e-162 573.9 354 84.5
Sp4g21430 Schrenkiella parvula HOM05D003864 ORTHO05D004658 8.2e-159 563.9 350 83.7
Thhalv10016876m.g Eutrema salsugineum HOM05D003864 ORTHO05D004658 3.4e-157 558.5 350 83.1
AT2G39080 Arabidopsis thaliana HOM05D003864 ORTHO05D004658 1.2e-154 550.1 351 82.6
Carub.0004s2113 Capsella rubella HOM05D003864 ORTHO05D004658 7.4e-152 540.8 354 80.2
AL4G36380 Arabidopsis lyrata HOM05D003864 ORTHO05D004658 4.3e-144 515.0 293 86.7
THA.LOC104820237 Tarenaya hassleriana HOM05D003864 ORTHO05D004658 1.8e-134 483.0 352 73.0
THA.LOC104821766 Tarenaya hassleriana HOM05D003864 ORTHO05D004658 2.2e-132 476.1 356 70.5
Aa31LG5G20520 Aethionema arabicum HOM05D003864 ORTHO05D004658 5.5e-115 418.3 351 63.2
Aqoxy2G03115 Aquilegia oxysepala HOM05D003864 ORTHO05D004658 1.6e-114 416.8 283 70.7
Nitab4.5_0000784g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 2.7e-114 416.0 268 73.1
Potri.008G204700 Populus trichocarpa HOM05D003864 ORTHO05D004658 1.2e-112 410.6 299 67.9
Ciclev10005325m.g Citrus clementina HOM05D003864 ORTHO05D004658 4.4e-112 408.7 351 62.4
Solyc01g067630.3 Solanum lycopersicum HOM05D003864 ORTHO05D004658 1.3e-111 407.1 286 68.5
PGSC0003DMG400030786 Solanum tuberosum HOM05D003864 ORTHO05D004658 1.3e-111 407.1 287 69.7
TAR633G1069 Trochodendron aralioides HOM05D003864 ORTHO05D004658 1.3e-111 407.1 292 68.5
Actinidia23428 Actinidia chinensis HOM05D003864 ORTHO05D004658 2.8e-111 406.0 301 66.4
Cc03_g02350 Coffea canephora HOM05D003864 ORTHO05D004658 2.8e-111 406.0 283 69.3
Peaxi162Scf00033g01410 Petunia axillaris HOM05D003864 ORTHO05D004658 2.8e-111 406.0 308 66.9
Gorai.011G185900 Gossypium raimondii HOM05D003864 ORTHO05D004658 4.8e-111 405.2 349 61.6
Nn4g25986 Nelumbo nucifera HOM05D003864 ORTHO05D004658 4.8e-111 405.2 352 60.8
CAN.G256.9 Capsicum annuum HOM05D003864 ORTHO05D004658 6.3e-111 404.8 342 62.9
Eucgr.B01266 Eucalyptus grandis HOM05D003864 ORTHO05D004658 6.3e-111 404.8 284 69.4
Gohir.D10G166700 Gossypium hirsutum HOM05D003864 ORTHO05D004658 6.3e-111 404.8 349 61.3
TWI53G1008 Tripterygium wilfordii HOM05D003864 ORTHO05D004658 6.3e-111 404.8 347 60.5
Haze_01063 Corylus avellana HOM05D003864 ORTHO05D004658 1.1e-110 404.1 356 60.4
CiPaw.02G086600 Carya illinoinensis HOM05D003864 ORTHO05D004658 3.1e-110 402.5 295 67.5
Sabra08G0157300 Salix brachista HOM05D003864 ORTHO05D004658 3.1e-110 402.5 310 64.8
Manes.03G191300 Manihot esculenta HOM05D003864 ORTHO05D004658 4.1e-110 402.1 295 67.5
TWI53G0015 Tripterygium wilfordii HOM05D003864 ORTHO05D004658 4.1e-110 402.1 347 60.2
Nitab4.5_0004537g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 5.4e-110 401.7 307 64.5
Gohir.A10G101440 Gossypium hirsutum HOM05D003864 ORTHO05D004658 1.6e-109 400.2 324 63.3
Cfa015492 Carpinus fangiana HOM05D003864 ORTHO05D004658 2.7e-109 399.4 353 59.5
CsaV3_6G017400 Cucumis sativus L. HOM05D003864 ORTHO05D004658 3.5e-109 399.1 333 60.1
Cpa.g.sc1008.4 Carica papaya HOM05D003864 ORTHO05D004658 4.5e-109 398.7 332 63.6
Manes.15G016900 Manihot esculenta HOM05D003864 ORTHO05D004658 4.5e-109 398.7 302 66.6
Sed0008062 Sechium edule HOM05D003864 ORTHO05D004658 4.5e-109 398.7 312 64.7
Thecc.04G277700 Theobroma cacao HOM05D003864 ORTHO05D004658 4.5e-109 398.7 350 60.3
MELO3C021355.2 Cucumis melo HOM05D003864 ORTHO05D004658 5.9e-109 398.3 350 58.6
Nn3g21324 Nelumbo nucifera HOM05D003864 ORTHO05D004658 3.8e-108 395.6 311 63.3
ClCG06G005360 Citrullus lanatus HOM05D003864 ORTHO05D004658 5.0e-108 395.2 346 59.2
Nitab4.5_0001459g0140 Nicotiana tabacum HOM05D003864 ORTHO05D004658 5.0e-108 395.2 305 65.2
Nitab4.5_0001054g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 1.1e-107 394.0 311 64.3
Lj6A670T81 Lonicera japonica HOM05D003864 ORTHO05D004658 1.5e-107 393.7 304 65.8
Duzib151G0071 Durio zibethinus HOM05D003864 ORTHO05D004658 1.9e-107 393.3 352 59.1
PSO210G7573 Papaver somniferum HOM05D003864 ORTHO05D004658 4.2e-107 392.1 339 61.4
TAR362G0395 Trochodendron aralioides HOM05D003864 ORTHO05D004658 4.2e-107 392.1 314 62.4
GSVIVG01017804001 Vitis vinifera HOM05D003864 ORTHO05D004658 5.5e-107 391.7 301 64.8
Oeu044793.1 Olea europaea HOM05D003864 ORTHO05D004658 7.2e-107 391.3 272 68.4
CiPaw.01G152900 Carya illinoinensis HOM05D003864 ORTHO05D004658 1.6e-106 390.2 295 65.4
Prupe.1G142000 Prunus persica HOM05D003864 ORTHO05D004658 2.1e-106 389.8 305 64.3
PGR031G0559 Punica granatum HOM05D003864 ORTHO05D004658 4.7e-106 388.7 332 59.3
vmacro08202 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 4.7e-106 388.7 294 65.0
PSO170G3769 Papaver somniferum HOM05D003864 ORTHO05D004658 1.4e-105 387.1 339 60.5
Sc19g0004950 Simmondsia chinensis HOM05D003864 ORTHO05D004658 1.4e-105 387.1 341 58.1
MSTRG.10054 Avicennia marina HOM05D003864 ORTHO05D004658 2.3e-105 386.3 334 60.2
Sed0015457 Sechium edule HOM05D003864 ORTHO05D004658 3.0e-105 386.0 349 58.7
DCAR_002443 Daucus carota HOM05D003864 ORTHO05D004658 6.8e-105 384.8 312 60.6
FvH4_4g17200 Fragaria vesca HOM05D003864 ORTHO05D004658 1.2e-104 384.0 298 66.1
DCAR_027110 Daucus carota HOM05D003864 ORTHO05D004658 2.0e-104 383.3 279 65.9
Atru.chr4.2755 Acer truncatum HOM05D003864 ORTHO05D004658 1.3e-103 380.6 344 57.8
Lsat_1_v5_gn_5_56881 Lactuca sativa HOM05D003864 ORTHO05D004658 2.2e-103 379.8 266 68.0
Hund20596 Selenicereus undatus HOM05D003864 ORTHO05D004658 2.2e-103 379.8 296 62.5
RcHm_v2.0_Chr4g0421021 Rosa chinensis HOM05D003864 ORTHO05D004658 3.7e-103 379.0 316 61.4
BolC3t14979H Brassica oleracea HOM05D003864 ORTHO05D004658 1.8e-102 376.7 222 89.2
Os01g0367100 Oryza sativa ssp. japonica HOM05D003864 ORTHO05D004658 1.8e-102 376.7 284 63.4
LjContig00389g0005087 Lotus japonicus HOM05D003864 ORTHO05D004658 3.1e-102 375.9 299 62.9
PGR004G1016 Punica granatum HOM05D003864 ORTHO05D004658 7.0e-102 374.8 286 64.0
ECA240G1720 Erigeron canadensis HOM05D003864 ORTHO05D004658 9.2e-102 374.4 296 63.9
Lj4g0016445 Lotus japonicus HOM05D003864 ORTHO05D004658 2.0e-101 373.2 262 67.9
arahy.Tifrunner.gnm1.ann1.CLS5KG Arachis hypogaea HOM05D003864 ORTHO05D004658 3.5e-101 372.5 292 64.4
Glyma.13G215300 Glycine max HOM05D003864 ORTHO05D004658 1.7e-100 370.2 305 61.3
Medtr2g020190 Medicago truncatula HOM05D003864 ORTHO05D004658 1.7e-100 370.2 252 70.6
CDE01G0506 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 2.3e-100 369.8 316 59.5
Zm00001eb131760 Zea mays HOM05D003864 ORTHO05D004658 8.6e-100 367.9 285 62.1
CDE05G0625 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 1.1e-99 367.5 282 64.5
MD13G1173800 Malus domestica HOM05D003864 ORTHO05D004658 4.3e-99 365.5 271 67.2
Phvul.006G161500 Phaseolus vulgaris HOM05D003864 ORTHO05D004658 4.3e-99 365.5 262 67.2
Ca_00573_v3 Cicer arietinum L. HOM05D003864 ORTHO05D004658 7.3e-99 364.8 269 65.1
Glyma.15G097900 Glycine max HOM05D003864 ORTHO05D004658 9.5e-99 364.4 305 61.6
Phvul.002G188400 Phaseolus vulgaris HOM05D003864 ORTHO05D004658 9.5e-99 364.4 326 58.0
Ah.12g064180 Amaranthus hybridus HOM05D003864 ORTHO05D004658 2.1e-98 363.2 329 56.8
Lalb_Chr07g0188241 Lupinus albus HOM05D003864 ORTHO05D004658 2.1e-98 363.2 306 61.1
Lalb_Chr20g0118111 Lupinus albus HOM05D003864 ORTHO05D004658 3.6e-98 362.5 344 55.2
TPR.G1486 Trifolium pratense HOM05D003864 ORTHO05D004658 6.1e-98 361.7 309 58.6
Glyma.05G133900 Glycine max HOM05D003864 ORTHO05D004658 1.0e-97 360.9 281 63.3
Migut.G00209 Erythranthe guttata HOM05D003864 ORTHO05D004658 1.4e-97 360.5 281 63.7
Dinv38324 Davidia involucrata HOM05D003864 ORTHO05D004658 1.8e-97 360.1 260 68.5
Zm00001eb341670 Zea mays HOM05D003864 ORTHO05D004658 5.2e-97 358.6 287 61.0
COL.COLO4_13927 Corchorus olitorius HOM05D003864 ORTHO05D004658 1.2e-96 357.5 283 63.6
Glyma.08G088600 Glycine max HOM05D003864 ORTHO05D004658 9.8e-96 354.4 327 57.2
Ca_18234_v3 Cicer arietinum L. HOM05D003864 ORTHO05D004658 2.2e-95 353.2 313 58.5
Peaxi162Scf00386g00316 Petunia axillaris HOM05D003864 ORTHO05D004658 1.9e-94 350.1 299 62.2
TPR.G23836 Trifolium pratense HOM05D003864 ORTHO05D004658 2.4e-94 349.7 306 59.2
Rhsim02G0013600 Rhododendron simsii HOM05D003864 ORTHO05D004658 5.4e-94 348.6 296 60.8
arahy.Tifrunner.gnm1.ann1.ZU35GG Arachis hypogaea HOM05D003864 ORTHO05D004658 1.2e-93 347.4 347 55.3
Medtr4g094742 Medicago truncatula HOM05D003864 ORTHO05D004658 1.2e-93 347.4 299 59.5
EL10Ac6g14524 Beta vulgaris HOM05D003864 ORTHO05D004658 6.6e-92 341.7 330 55.5
Lalb_Chr18g0055711 Lupinus albus HOM05D003864 ORTHO05D004658 3.3e-91 339.3 309 57.9
HPP92_017180 Vanilla planifolia HOM05D003864 ORTHO05D004658 1.1e-89 334.3 331 52.9
Rhsim04G0216400 Rhododendron simsii HOM05D003864 ORTHO05D004658 4.0e-89 332.4 334 53.9
Hma1.2p1_0150F.1_g066600 Hydrangea macrophylla HOM05D003864 ORTHO05D004658 1.5e-88 330.5 231 68.8
vmacro15256 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 7.5e-88 328.2 349 51.6
VMungo0540G0878 Vigna mungo HOM05D006883 ORTHO05D008624 2.2e-87 326.6 258 64.0
SGA_v2.0_scaffold57G20242 Striga asiatica HOM05D003864 ORTHO05D004658 6.4e-87 325.1 334 54.2
vmacro22597 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 5.4e-86 322.0 324 53.1
Actinidia00050 Actinidia chinensis HOM05D003864 ORTHO05D004658 7.0e-86 321.6 340 52.6
CARHR133840 Cardamine hirsuta HOM05D003864 ORTHO05D004658 7.0e-86 321.6 187 84.5
ATR0706G015 Amborella trichopoda HOM05D003864 ORTHO05D004658 7.8e-85 318.2 301 54.8
Psat1g187240 Pisum sativum HOM05D003864 ORTHO05D004658 1.7e-84 317.0 283 57.6
MD16G1174800 Malus domestica HOM05D003864 ORTHO05D004658 1.1e-83 314.3 338 51.5
Pp3c12_8620 Physcomitrium patens HOM05D003864 ORTHO05D004658 9.5e-83 311.2 258 57.0
SGA_v2.0_scaffold89G27550 Striga asiatica HOM05D003864 ORTHO05D004658 1.8e-81 307.0 331 50.8
VMungo0251G3051 Vigna mungo HOM05D003864 ORTHO05D004658 3.1e-81 306.2 290 55.2
Mapoly0090s0075 Marchantia polymorpha HOM05D003864 ORTHO05D004658 8.9e-81 304.7 307 52.1
Pp3c13_19760 Physcomitrium patens HOM05D003864 ORTHO05D004658 2.0e-80 303.5 258 53.9
AagrBONN_evm.TU.Sc2ySwM_344.1910 Anthoceros agrestis HOM05D003864 ORTHO05D004658 1.9e-78 297.0 277 51.6
C04p08680 Brassica napus HOM05D003864 ORTHO05D004658 2.4e-78 296.6 170 86.5
MBI19_g44903_MAGBIO Magnolia biondii HOM05D003864 ORTHO05D004658 5.4e-78 295.4 206 67.5
FAN07G1078 Fragaria x ananassa HOM05D003864 ORTHO05D004658 8.6e-76 288.1 285 55.8
FAN17G0790 Fragaria x ananassa HOM05D003864 ORTHO05D004658 1.9e-75 287.0 285 55.4
arahy.Tifrunner.gnm1.ann1.858I9V Arachis hypogaea HOM05D003864 ORTHO05D004658 4.7e-74 282.3 345 46.7
arahy.Tifrunner.gnm1.ann1.WPBE4U Arachis hypogaea HOM05D003864 ORTHO05D004658 1.8e-73 280.4 325 48.3
FAN22G0711 Fragaria x ananassa HOM05D003864 ORTHO05D004658 1.2e-72 277.7 294 53.4
Os01g0367400 Oryza sativa ssp. japonica HOM05D003864 ORTHO05D004658 4.9e-71 272.3 278 50.0
MBI19_g26585_MAGBIO Magnolia biondii HOM05D003864 ORTHO05D004658 2.4e-70 270.0 282 50.7
CBR_g37156 Chara braunii HOM05D003864 ORTHO05D004658 2.3e-68 263.5 260 48.5
AUR62007746 Chenopodium quinoa HOM05D003864 ORTHO05D004658 8.7e-68 261.5 272 50.7
AUR62002937 Chenopodium quinoa HOM05D003864 ORTHO05D004658 3.3e-67 259.6 332 44.3
SMO356G0587 Selaginella moellendorffii HOM05D003864 ORTHO05D004658 2.1e-66 256.9 262 48.5
Sc25g0004750 Simmondsia chinensis HOM05D003864 ORTHO05D004658 2.1e-61 240.4 254 51.6
BcaC02g12030 Brassica carinata HOM05D003864 ORTHO05D004658 2.8e-58 229.9 139 79.9
QL06p007391 Quercus lobata HOM05D003864 ORTHO05D004658 6.2e-58 228.8 172 64.5
BolC4t22460H Brassica oleracea HOM05D003864 ORTHO05D004658 3.1e-57 226.5 123 91.1
Solyc06g054530.3 Solanum lycopersicum HOM05D003864 ORTHO05D004658 5.3e-57 225.7 155 69.7
PGSC0003DMG400010656 Solanum tuberosum HOM05D003864 ORTHO05D004658 5.8e-56 222.2 159 65.4
Sopen01g029580 Solanum pennellii HOM05D003864 ORTHO05D004658 7.6e-56 221.9 159 65.4
Dinv44425 Davidia involucrata HOM05D003864 ORTHO05D004658 1.7e-55 220.7 158 65.8
Sopen06g019600 Solanum pennellii HOM05D003864 ORTHO05D004658 6.4e-55 218.8 171 63.2
FAN12G3853 Fragaria x ananassa HOM05D003864 ORTHO05D004658 1.9e-54 217.2 233 51.1
CSS0001944 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 2.7e-53 213.4 183 59.6
CSS0038005 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 3.5e-53 213.0 183 59.0
SalBow2G1899 Salvia bowleyana HOM05D003864 ORTHO05D004658 1.0e-52 211.5 152 65.1
SHI00297 Sapria himalayana HOM05D003864 ORTHO05D004658 2.6e-48 196.8 490 30.2
unitig_748.g8369 Utricularia gibba HOM05D000472 ORTHO05D000344 7.6e-48 195.3 167 57.5
HanXRQChr13g0411231 Helianthus annuus HOM05D003864 ORTHO05D004658 5.5e-46 189.1 147 61.9
Psat7g088240 Pisum sativum HOM05D003864 ORTHO05D004658 5.5e-46 189.1 189 52.9
MCO15G076 Micromonas commoda HOM05D003864 ORTHO05D004658 9.3e-46 188.3 258 37.6
BcaNung07183 Brassica carinata HOM05D005803 ORTHO05D008090 2.5e-43 180.3 91 93.4
unitig_748.g8370 Utricularia gibba HOM05D003864 ORTHO05D004658 9.6e-43 178.3 109 72.5
Cre13.g608000 Chlamydomonas reinhardtii HOM05D003864 ORTHO05D004658 5.3e-41 172.6 270 37.0
CDE12G0314 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 7.6e-40 168.7 106 72.6
PRCOL_00006073 Prasinoderma coloniale HOM05D003864 ORTHO05D004658 2.9e-39 166.8 344 31.4
CDE12G0924 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 6.5e-39 165.6 132 59.8
HanXRQChr13g0411221 Helianthus annuus HOM05D003864 ORTHO05D004658 2.5e-38 163.7 111 69.4
SEGI_14152 Sequoiadendron giganteum HOM05D003864 ORTHO05D004658 2.8e-34 150.2 115 58.3
QL06p007393 Quercus lobata HOM05D003864 ORTHO05D004658 2.9e-31 140.2 107 65.4
MSTRG.21813 Avicennia marina HOM05D003864 ORTHO05D004658 1.1e-30 138.3 92 69.6
CSS0041699 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 4.6e-29 132.9 173 45.7
CSS0003637 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 6.1e-29 132.5 97 60.8
CSS0011053 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 5.1e-28 129.4 114 55.3
RcHm_v2.0_Chr4g0421071 Rosa chinensis HOM05D003864 ORTHO05D004658 2.0e-27 127.5 125 54.4
SEGI_31487 Sequoiadendron giganteum HOM05D003864 ORTHO05D004658 4.8e-26 122.9 90 60.0
SEGI_13555 Sequoiadendron giganteum HOM05D003864 ORTHO05D004658 9.1e-17 92.0 72 56.9
Actinidia25721 Actinidia chinensis HOM05D003864 ORTHO05D004658 1.3e-15 88.2 68 57.4
RcHm_v2.0_Chr4g0421081 Rosa chinensis HOM05D003864 ORTHO05D004658 1.3e-15 88.2 56 71.4
CSS0015623 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 1.1e-14 85.1 51 74.5
Zm00001eb400060 Zea mays HOM05D003864 ORTHO05D004658 5.2e-12 76.3 49 75.5
Dinv02075 Davidia involucrata HOM05D003864 ORTHO05D035062 2.6e-08 63.9 45 64.4
Dinv08007 Davidia involucrata HOM05D003864 ORTHO05D035062 1.3e-07 61.6 43 65.1
CSS0047531 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D112748 3.2e-06 57.0 55 56.4


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