Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g09079 Brassica carinata HOM05D001463 ORTHO05D001282 5.8e-81 304.3 167 100.0
BcaC02g12118 Brassica carinata HOM05D001463 ORTHO05D001282 9.3e-55 217.2 123 100.0
C04p07650 Brassica napus HOM05D001463 ORTHO05D001282 4.6e-54 214.9 123 97.6
A05p06550 Brassica napus HOM05D001463 ORTHO05D001282 6.0e-54 214.5 123 90.2
BcaB02g09078 Brassica carinata HOM05D001463 ORTHO05D001282 3.7e-51 205.3 123 96.7
BolC4t22381H Brassica oleracea HOM05D001463 ORTHO05D001282 8.2e-51 204.1 131 90.8
BraA05t19624Z Brassica rapa HOM05D001463 ORTHO05D001282 2.4e-50 202.6 131 89.3
Thhalv10017636m.g Eutrema salsugineum HOM05D001463 ORTHO05D001282 1.4e-39 166.8 158 65.2
C04p67640 Brassica napus HOM05D001463 ORTHO05D001282 4.2e-39 165.2 122 73.8
BolC4t28263H Brassica oleracea HOM05D001463 ORTHO05D001282 4.2e-39 165.2 122 73.8
Sp4g22150 Schrenkiella parvula HOM05D001463 ORTHO05D001282 3.0e-37 159.1 123 78.9
BcaB02g09077 Brassica carinata HOM05D001463 ORTHO05D001282 4.3e-36 155.2 123 72.4
AL4G37420 Arabidopsis lyrata HOM05D001463 ORTHO05D001282 2.1e-30 136.3 123 61.8
Carub.0004s2198 Capsella rubella HOM05D001463 ORTHO05D001282 2.1e-30 136.3 138 59.4
A04p30220 Brassica napus HOM05D001463 ORTHO05D001282 2.4e-26 122.9 123 60.2
BraA04t18486Z Brassica rapa HOM05D001463 ORTHO05D001282 2.4e-26 122.9 123 60.2
BcaNung07238 Brassica carinata HOM05D001463 ORTHO05D001282 3.0e-21 105.9 122 61.5
CARHR134770 Cardamine hirsuta HOM05D001463 ORTHO05D001282 1.5e-20 103.6 113 64.6
A04p04330 Brassica napus HOM05D001463 ORTHO05D001282 8.2e-19 97.8 116 53.4
BraA04t16144Z Brassica rapa HOM05D001463 ORTHO05D001282 8.2e-19 97.8 116 53.4
AT2G39855 Arabidopsis thaliana HOM05D001463 ORTHO05D001282 3.1e-18 95.9 73 67.1
BcaB02g08404 Brassica carinata HOM05D001463 ORTHO05D001282 2.6e-17 92.8 98 51.0
BcaC02g09782 Brassica carinata HOM05D001463 ORTHO05D001282 4.5e-17 92.0 98 53.1
C04p36660 Brassica napus HOM05D001463 ORTHO05D001282 4.5e-17 92.0 98 53.1
BolC4t25129H Brassica oleracea HOM05D001463 ORTHO05D001282 4.5e-17 92.0 98 53.1
THA.LOC104810063 Tarenaya hassleriana HOM05D001463 ORTHO05D001282 5.0e-16 88.6 129 58.9
BcaB01g00071 Brassica carinata HOM05D001463 ORTHO05D001282 4.2e-15 85.5 104 54.8
A09p48650 Brassica napus HOM05D001463 ORTHO05D001282 2.7e-14 82.8 103 54.4
BolC8t50722H Brassica oleracea HOM05D001463 ORTHO05D001282 2.7e-14 82.8 101 54.5
BraA09t40317Z Brassica rapa HOM05D001463 ORTHO05D001282 2.7e-14 82.8 103 54.4
BcaC07g39895 Brassica carinata HOM05D001463 ORTHO05D001282 3.6e-14 82.4 102 53.9
C08p30990 Brassica napus HOM05D001463 ORTHO05D001282 6.1e-14 81.6 103 54.4
Haze_17151 Corylus avellana HOM05D001463 ORTHO05D001282 8.0e-14 81.3 126 41.3
Sp5g06820 Schrenkiella parvula HOM05D001463 ORTHO05D001282 2.3e-13 79.7 101 52.5
Phvul.001G238300 Phaseolus vulgaris HOM05D001463 ORTHO05D001282 7.5e-12 74.7 114 38.6
VMungo1383G2188 Vigna mungo HOM05D001463 ORTHO05D001282 9.7e-12 74.3 114 42.1
Sabra08G0045300 Salix brachista HOM05D001463 ORTHO05D001282 2.2e-11 73.2 101 42.6
CiPaw.01G293300 Carya illinoinensis HOM05D001463 ORTHO05D001282 6.3e-11 71.6 107 48.6
QL08p062024 Quercus lobata HOM05D001463 ORTHO05D001282 8.2e-11 71.2 110 44.5
Carub.0005s2241 Capsella rubella HOM05D001463 ORTHO05D001282 1.4e-10 70.5 86 46.5
MD01G1141700 Malus domestica HOM05D001463 ORTHO05D001282 1.4e-10 70.5 98 54.1
Lj6g0014007 Lotus japonicus HOM05D001463 ORTHO05D001282 2.4e-10 69.7 104 42.3
Cpa.g.sc19.255 Carica papaya HOM05D001463 ORTHO05D001282 7.0e-10 68.2 100 46.0
Lalb_Chr18g0052921 Lupinus albus HOM05D001463 ORTHO05D001282 7.0e-10 68.2 125 37.6
Sabra10G0151000 Salix brachista HOM05D001463 ORTHO05D001282 1.6e-09 67.0 101 40.6
MD07G1207300 Malus domestica HOM05D001463 ORTHO05D001282 2.0e-09 66.6 99 52.5
CiPaw.02G188100 Carya illinoinensis HOM05D001463 ORTHO05D001282 5.9e-09 65.1 109 38.5
Duzib106G1623 Durio zibethinus HOM05D001463 ORTHO05D001282 5.9e-09 65.1 126 48.4
Potri.008G061700 Populus trichocarpa HOM05D001463 ORTHO05D001282 7.7e-09 64.7 101 39.6
Thecc.10G031300 Theobroma cacao HOM05D001463 ORTHO05D001282 7.7e-09 64.7 117 41.0
Manes.10G021200 Manihot esculenta HOM05D001463 ORTHO05D001282 1.0e-08 64.3 112 39.3
Psat5g124880 Pisum sativum HOM05D001463 ORTHO05D001282 1.0e-08 64.3 127 37.0
Potri.010G196400 Populus trichocarpa HOM05D001463 ORTHO05D001282 1.3e-08 63.9 99 40.4
Glyma.02G252500 Glycine max HOM05D001463 ORTHO05D001282 1.7e-08 63.5 103 45.6
PGSC0003DMG400027191 Solanum tuberosum HOM05D001463 ORTHO05D001282 2.2e-08 63.2 123 33.3
Medtr5g081360 Medicago truncatula HOM05D001463 ORTHO05D001282 5.0e-08 62.0 128 36.7
CARHR165710 Cardamine hirsuta HOM05D001463 ORTHO05D001282 8.5e-08 61.2 85 60.0
FvH4_7g23590 Fragaria vesca HOM05D001463 ORTHO05D001282 1.9e-07 60.1 92 42.4
FAN06G0722 Fragaria x ananassa HOM05D001463 ORTHO05D001282 1.9e-07 60.1 92 42.4
DCAR_024854 Daucus carota HOM05D001463 ORTHO05D001282 3.2e-07 59.3 140 32.9
FAN10G4334 Fragaria x ananassa HOM05D022825 ORTHO05D001282 3.2e-07 59.3 116 40.5
FAN03G1607 Fragaria x ananassa HOM05D022825 ORTHO05D001282 4.2e-07 58.9 92 46.7
Eucgr.J00967 Eucalyptus grandis HOM05D001463 ORTHO05D001282 5.5e-07 58.5 121 35.5
FAN06G2530 Fragaria x ananassa HOM05D022825 ORTHO05D001282 5.5e-07 58.5 93 48.4
Ciclev10033996m.g Citrus clementina HOM05D001463 ORTHO05D001282 9.4e-07 57.8 97 41.2
Duzib106G0892 Durio zibethinus HOM05D001463 ORTHO05D001282 2.1e-06 56.6 127 45.7
Manes.07G122500 Manihot esculenta HOM05D001463 ORTHO05D001282 2.1e-06 56.6 100 40.0
Solyc05g052880.4 Solanum lycopersicum HOM05D001463 ORTHO05D001282 2.1e-06 56.6 127 37.0
MSTRG.8288 Avicennia marina HOM05D001463 ORTHO05D001282 2.7e-06 56.2 104 39.4
Rhsim03G0137600 Rhododendron simsii HOM05D001463 ORTHO05D001282 2.7e-06 56.2 121 33.9
Sc10g0001920 Simmondsia chinensis HOM05D001463 ORTHO05D001282 2.7e-06 56.2 122 40.2
Solyc05g052890.3 Solanum lycopersicum HOM05D001463 ORTHO05D001282 2.7e-06 56.2 106 34.0
Sopen05g031400 Solanum pennellii HOM05D001463 ORTHO05D001282 2.7e-06 56.2 106 34.0
Cc02_g07230 Coffea canephora HOM05D001463 ORTHO05D001282 3.6e-06 55.8 105 40.0
FAN01G2241 Fragaria x ananassa HOM05D022825 ORTHO05D001282 3.6e-06 55.8 117 38.5
Gohir.A05G302600 Gossypium hirsutum HOM05D001463 ORTHO05D001282 6.1e-06 55.1 115 36.5
ClCG07G003740 Citrullus lanatus HOM05D001463 ORTHO05D001282 8.0e-06 54.7 100 40.0
TWI15G0258 Tripterygium wilfordii HOM05D001463 ORTHO05D001282 8.0e-06 54.7 121 45.5


User provided reference genes

Program Settings