Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g09076 Brassica carinata HOM05D012316 ORTHO05D000721 1.0e-174 616.7 322 100.0
C04p07640 Brassica napus HOM05D012316 ORTHO05D000721 1.4e-128 463.4 338 76.3
BolC4t22380H Brassica oleracea HOM05D012316 ORTHO05D000721 7.9e-127 457.6 338 76.6
Sp4g22160 Schrenkiella parvula HOM05D012316 ORTHO05D000721 5.7e-125 451.4 344 72.1
BraA05t19623Z Brassica rapa HOM05D012316 ORTHO05D000721 8.4e-121 437.6 335 73.7
BcaC02g12120 Brassica carinata HOM05D012316 ORTHO05D000721 3.3e-117 425.6 337 73.0
A05p06540 Brassica napus HOM05D012316 ORTHO05D000721 5.7e-117 424.9 335 72.5
CARHR134790 Cardamine hirsuta HOM05D012316 ORTHO05D000721 4.5e-114 415.2 345 67.8
AL4G37440 Arabidopsis lyrata HOM05D012316 ORTHO05D000721 1.4e-112 410.2 350 68.6
Carub.0004s2199 Capsella rubella HOM05D012316 ORTHO05D000721 9.7e-109 397.5 346 67.3
Thhalv10017947m.g Eutrema salsugineum HOM05D012316 ORTHO05D000721 1.2e-103 380.6 346 63.9
AT2G39870 Arabidopsis thaliana HOM05D012316 ORTHO05D000721 9.7e-101 370.9 343 66.2
BraA04t18487Z Brassica rapa HOM05D012316 ORTHO05D000721 9.4e-96 354.4 335 66.6
BolC4t28264H Brassica oleracea HOM05D012316 ORTHO05D000721 1.5e-93 347.1 335 66.0
A04p30210 Brassica napus HOM05D001949 ORTHO05D003065 6.3e-76 288.5 301 63.1
C04p67650 Brassica napus HOM05D001949 ORTHO05D003065 2.4e-75 286.6 325 60.3
Aa31LG5G19750 Aethionema arabicum HOM05D001128 ORTHO05D000721 1.6e-74 283.9 363 52.6
THA.LOC104810062 Tarenaya hassleriana HOM05D001128 ORTHO05D000721 2.0e-45 187.2 385 41.0
THA.LOC104824295 Tarenaya hassleriana HOM05D001128 ORTHO05D000721 5.1e-41 172.6 391 38.4
THA.LOC104809429 Tarenaya hassleriana HOM05D001128 ORTHO05D000721 9.9e-37 158.3 374 37.4
Aa31LG10G10690 Aethionema arabicum HOM05D010817 ORTHO05D000721 1.2e-29 134.8 316 34.5
CARHR165790 Cardamine hirsuta HOM05D010817 ORTHO05D000721 2.2e-28 130.6 340 35.6
Carub.0005s2246 Capsella rubella HOM05D010817 ORTHO05D000721 1.5e-24 117.9 340 34.7
FAN03G2145 Fragaria x ananassa HOM05D001128 ORTHO05D000721 5.6e-24 115.9 357 33.9
BraA07t29934Z Brassica rapa HOM05D010817 ORTHO05D000721 2.1e-23 114.0 262 39.3
FAN10G3504 Fragaria x ananassa HOM05D001128 ORTHO05D000721 2.1e-23 114.0 363 33.3
FvH4_7g23630 Fragaria vesca HOM05D001128 ORTHO05D000721 2.8e-23 113.6 364 33.8
Cpa.g.sc19.247 Carica papaya HOM05D001128 ORTHO05D000721 8.1e-23 112.1 382 31.9
RcHm_v2.0_Chr1g0368901 Rosa chinensis HOM05D001128 ORTHO05D000721 1.1e-22 111.7 400 33.8
FAN01G1897 Fragaria x ananassa HOM05D001128 ORTHO05D000721 3.1e-22 110.2 366 32.5
A07p22570 Brassica napus HOM05D010817 ORTHO05D000721 5.3e-22 109.4 254 39.0
BolC6t37484H Brassica oleracea HOM05D010817 ORTHO05D000721 9.0e-22 108.6 264 39.4
Sabra10G0150300 Salix brachista HOM05D001128 ORTHO05D000721 1.5e-21 107.8 401 31.9
COL.COLO4_25581 Corchorus olitorius HOM05D001128 ORTHO05D000721 2.0e-21 107.5 386 32.4
Haze_17155 Corylus avellana HOM05D001128 ORTHO05D000721 2.6e-21 107.1 383 30.5
Potri.010G195800 Populus trichocarpa HOM05D001128 ORTHO05D000721 5.8e-21 105.9 399 30.8
BcaC08g44747 Brassica carinata HOM05D010817 ORTHO05D000721 7.6e-21 105.5 263 38.8
C06p22860 Brassica napus HOM05D010817 ORTHO05D000721 7.6e-21 105.5 263 38.8
Manes.07G123000 Manihot esculenta HOM05D001128 ORTHO05D000721 7.6e-21 105.5 404 31.2
Thecc.10G030500 Theobroma cacao HOM05D001128 ORTHO05D000721 9.9e-21 105.1 390 32.8
BcaB02g07676 Brassica carinata HOM05D010817 ORTHO05D000721 2.2e-20 104.0 174 46.0
Gohir.D10G238700 Gossypium hirsutum HOM05D001128 ORTHO05D000721 2.2e-20 104.0 365 33.2
Prupe.2G243200 Prunus persica HOM05D001128 ORTHO05D000721 4.9e-20 102.8 379 32.2
QL08p062120 Quercus lobata HOM05D001128 ORTHO05D000721 4.9e-20 102.8 383 32.1
Cfa001394 Carpinus fangiana HOM05D001128 ORTHO05D000721 8.4e-20 102.1 383 30.0
Gorai.011G274600 Gossypium raimondii HOM05D001128 ORTHO05D000721 8.4e-20 102.1 377 32.9
Gohir.A10G226400 Gossypium hirsutum HOM05D001128 ORTHO05D000721 1.1e-19 101.7 377 32.9
Potri.008G062200 Populus trichocarpa HOM05D001128 ORTHO05D000721 1.4e-19 101.3 398 32.4
VMungo1383G0733 Vigna mungo HOM05D001128 ORTHO05D000721 2.4e-19 100.5 359 31.8
FAN06G3577 Fragaria x ananassa HOM05D001128 ORTHO05D000721 4.2e-19 99.8 293 34.1
FAN06G2816 Fragaria x ananassa HOM05D001128 ORTHO05D000721 7.1e-19 99.0 293 34.1
AL5G36940 Arabidopsis lyrata HOM05D010817 ORTHO05D000721 9.3e-19 98.6 266 34.6
Duzib128G2050 Durio zibethinus HOM05D001128 ORTHO05D000721 9.3e-19 98.6 398 30.7
Phvul.001G238700 Phaseolus vulgaris HOM05D001128 ORTHO05D000721 1.6e-18 97.8 366 32.2
Sabra08G0045800 Salix brachista HOM05D001128 ORTHO05D000721 1.6e-18 97.8 393 30.0
CiPaw.01G293700 Carya illinoinensis HOM05D001128 ORTHO05D000721 6.0e-18 95.9 401 29.4
Duzib106G0526 Durio zibethinus HOM05D001128 ORTHO05D000721 7.9e-18 95.5 380 30.0
Gohir.D04G065500 Gossypium hirsutum HOM05D001128 ORTHO05D000721 7.9e-18 95.5 350 33.1
Gorai.012G073700 Gossypium raimondii HOM05D001128 ORTHO05D000721 7.9e-18 95.5 350 33.1
arahy.Tifrunner.gnm1.ann1.EVQB8B Arachis hypogaea HOM05D001128 ORTHO05D000721 1.0e-17 95.1 406 30.3
Gohir.A05G346700 Gossypium hirsutum HOM05D001128 ORTHO05D000721 1.8e-17 94.4 350 32.3
Ca_05916_v3 Cicer arietinum L. HOM05D001128 ORTHO05D000721 2.3e-17 94.0 373 30.6
arahy.Tifrunner.gnm1.ann1.RKI1B6 Arachis hypogaea HOM05D001128 ORTHO05D000721 5.1e-17 92.8 406 30.5
CANSAT56G3374 Cannabis sativa HOM05D001128 ORTHO05D000721 5.1e-17 92.8 406 30.3
Ca_17132_v3 Cicer arietinum L. HOM05D001128 ORTHO05D000721 5.1e-17 92.8 343 31.5
Medtr5g081460 Medicago truncatula HOM05D001128 ORTHO05D000721 6.7e-17 92.4 367 31.3
CiPaw.02G188400 Carya illinoinensis HOM05D001128 ORTHO05D000721 1.1e-16 91.7 384 31.2
TPR.G11407 Trifolium pratense HOM05D001128 ORTHO05D000721 1.9e-16 90.9 356 31.2
Thhalv10010589m.g Eutrema salsugineum HOM05D010817 ORTHO05D000721 2.5e-16 90.5 334 34.1
Manes.10G020800 Manihot esculenta HOM05D001128 ORTHO05D000721 2.5e-16 90.5 408 29.2
Nitab4.5_0002822g0050 Nicotiana tabacum HOM05D001128 ORTHO05D000721 2.5e-16 90.5 386 31.1
Actinidia02898 Actinidia chinensis HOM05D001128 ORTHO05D000721 3.3e-16 90.1 394 29.7
Dinv16282 Davidia involucrata HOM05D001128 ORTHO05D000721 3.3e-16 90.1 415 28.9
Glyma.18G031800 Glycine max HOM05D001128 ORTHO05D000721 3.3e-16 90.1 357 31.4
Psat2g036720 Pisum sativum HOM05D001128 ORTHO05D000721 4.3e-16 89.7 381 29.1
MD01G1142200 Malus domestica HOM05D001128 ORTHO05D000721 1.3e-15 88.2 376 33.5
Manes.07G123100 Manihot esculenta HOM05D001128 ORTHO05D000721 1.3e-15 88.2 326 31.3
Rhsim03G0138400 Rhododendron simsii HOM05D001128 ORTHO05D000721 1.3e-15 88.2 371 29.1
CsaV3_5G008580 Cucumis sativus L. HOM05D001128 ORTHO05D000721 1.6e-15 87.8 372 32.5
BcaB02g08403 Brassica carinata HOM05D010817 ORTHO05D000721 2.8e-15 87.0 332 33.7
Lj6g0007644 Lotus japonicus HOM05D001128 ORTHO05D000721 2.8e-15 87.0 356 30.9
TAR623G0478 Trochodendron aralioides HOM05D001128 ORTHO05D000721 6.2e-15 85.9 378 29.9
PSO384G2375 Papaver somniferum HOM05D001128 ORTHO05D000721 8.1e-15 85.5 400 27.8
Gohir.D04G126000 Gossypium hirsutum HOM05D001128 ORTHO05D000721 1.1e-14 85.1 380 30.0
Sp5g06770 Schrenkiella parvula HOM05D010817 ORTHO05D000721 1.1e-14 85.1 268 36.2
Lalb_Chr18g0052901 Lupinus albus HOM05D001128 ORTHO05D000721 1.4e-14 84.7 371 29.4
arahy.Tifrunner.gnm1.ann1.U326PE Arachis hypogaea HOM05D001128 ORTHO05D000721 1.8e-14 84.3 385 29.4
Gorai.012G109000 Gossypium raimondii HOM05D001128 ORTHO05D000721 1.8e-14 84.3 371 30.5
Dinv34448 Davidia involucrata HOM05D001128 ORTHO05D000721 2.4e-14 84.0 362 29.6
AT3G55690 Arabidopsis thaliana HOM05D010817 ORTHO05D000721 3.1e-14 83.6 268 30.6
Glyma.11G225400 Glycine max HOM05D001128 ORTHO05D000721 5.3e-14 82.8 369 29.3
Lj1A945T19 Lonicera japonica HOM05D001128 ORTHO05D000721 5.3e-14 82.8 383 29.8
Manes.10G020700 Manihot esculenta HOM05D001128 ORTHO05D000721 5.3e-14 82.8 391 26.9
MD07G1207900 Malus domestica HOM05D001128 ORTHO05D000721 1.2e-13 81.6 141 45.4
MELO3C026566.2 Cucumis melo HOM05D001128 ORTHO05D000721 1.5e-13 81.3 372 31.7
PSO339G4622 Papaver somniferum HOM05D001128 ORTHO05D000721 1.5e-13 81.3 401 27.4
TAR633G0212 Trochodendron aralioides HOM05D001128 ORTHO05D000721 2.0e-13 80.9 364 27.5
TAR636G2726 Trochodendron aralioides HOM05D001128 ORTHO05D000721 2.6e-13 80.5 384 28.9
arahy.Tifrunner.gnm1.ann1.1NAQ44 Arachis hypogaea HOM05D001128 ORTHO05D000721 3.4e-13 80.1 388 28.6
Glyma.14G063900 Glycine max HOM05D001128 ORTHO05D000721 3.4e-13 80.1 391 28.6
A04p04300 Brassica napus HOM05D010817 ORTHO05D000721 4.5e-13 79.7 328 32.9
TWI09G0818 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 4.5e-13 79.7 401 29.7
Gohir.A04G086100 Gossypium hirsutum HOM05D001128 ORTHO05D000721 5.8e-13 79.3 371 29.4
MBI14_g02856_MAGBIO Magnolia biondii HOM05D001128 ORTHO05D000721 5.8e-13 79.3 394 28.7
ClCG07G003770 Citrullus lanatus HOM05D001128 ORTHO05D000721 7.6e-13 79.0 372 30.4
VMungo0647G0267 Vigna mungo HOM05D001128 ORTHO05D000721 7.6e-13 79.0 380 28.7
Ciclev10031729m.g Citrus clementina HOM05D001128 ORTHO05D000721 1.3e-12 78.2 414 28.0
Medtr3g069670 Medicago truncatula HOM05D001128 ORTHO05D000721 1.3e-12 78.2 357 30.0
Phvul.008G228300 Phaseolus vulgaris HOM05D001128 ORTHO05D000721 1.3e-12 78.2 390 29.0
Lalb_Chr10g0104881 Lupinus albus HOM05D001128 ORTHO05D000721 1.7e-12 77.8 373 27.3
Nn2g11296 Nelumbo nucifera HOM05D001128 ORTHO05D000721 1.7e-12 77.8 382 27.2
Sed0015993 Sechium edule HOM05D001128 ORTHO05D000721 1.7e-12 77.8 331 29.6
Lj1A946G35 Lonicera japonica HOM05D001128 ORTHO05D000721 2.2e-12 77.4 349 28.9
BraA04t16141Z Brassica rapa HOM05D010817 ORTHO05D000721 3.8e-12 76.6 330 32.1
Nitab4.5_0000243g0040 Nicotiana tabacum HOM05D001128 ORTHO05D000721 3.8e-12 76.6 387 27.4
AUR62022804 Chenopodium quinoa HOM05D001128 ORTHO05D000721 6.5e-12 75.9 342 30.4
Lalb_Chr17g0346461 Lupinus albus HOM05D001128 ORTHO05D000721 6.5e-12 75.9 366 28.4
Ciclev10011799m.g Citrus clementina HOM05D001128 ORTHO05D000721 1.1e-11 75.1 391 28.4
vmacro20201 Vaccinium macrocarpon HOM05D001128 ORTHO05D000721 1.4e-11 74.7 347 30.0
Ah.10g036830 Amaranthus hybridus HOM05D001128 ORTHO05D000721 1.9e-11 74.3 360 29.7
LjContig00141g0001836 Lotus japonicus HOM05D001128 ORTHO05D000721 1.9e-11 74.3 354 27.4
Lalb_Chr04g0250911 Lupinus albus HOM05D001128 ORTHO05D000721 1.9e-11 74.3 362 28.5
TWI53G0706 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 1.9e-11 74.3 394 29.9
Lsat_1_v5_gn_8_80861 Lactuca sativa HOM05D001128 ORTHO05D000721 4.2e-11 73.2 367 27.5
Cpa.g.sc56.66 Carica papaya HOM05D001128 ORTHO05D000721 5.5e-11 72.8 371 27.2
MBI05_g02674_MAGBIO Magnolia biondii HOM05D001128 ORTHO05D000721 9.3e-11 72.0 317 29.0
SalBow1G2079 Salvia bowleyana HOM05D001128 ORTHO05D000721 1.2e-10 71.6 362 27.1
Thecc.05G027900 Theobroma cacao HOM05D001128 ORTHO05D000721 1.2e-10 71.6 371 29.6
CSS0047983 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 1.6e-10 71.2 319 30.4
RcHm_v2.0_Chr3g0464501 Rosa chinensis HOM05D001128 ORTHO05D000721 2.7e-10 70.5 376 27.7
HanXRQChr06g0176291 Helianthus annuus HOM05D001128 ORTHO05D000721 3.5e-10 70.1 327 29.7
Psat5g125600 Pisum sativum HOM05D001128 ORTHO05D000721 3.5e-10 70.1 268 29.9
vmacro07011 Vaccinium macrocarpon HOM05D001128 ORTHO05D000721 3.5e-10 70.1 363 26.7
Actinidia13814 Actinidia chinensis HOM05D001128 ORTHO05D000721 6.0e-10 69.3 386 29.0
CsaV3_6G001520 Cucumis sativus L. HOM05D001128 ORTHO05D000721 1.3e-09 68.2 358 26.3
TWI77G0372 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 1.8e-09 67.8 369 27.9
CSS0030928 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 2.3e-09 67.4 406 27.8
MSTRG.19049 Avicennia marina HOM05D001128 ORTHO05D000721 3.0e-09 67.0 350 27.4
Hma1.2p1_0039F.1_g024950 Hydrangea macrophylla HOM05D001128 ORTHO05D000721 3.0e-09 67.0 368 28.3
TWI74G1371 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 3.0e-09 67.0 366 28.1
VMungo1383G1773 Vigna mungo HOM05D001128 ORTHO05D000721 3.0e-09 67.0 405 27.4
Hma1.2p1_0026F.1_g016650 Hydrangea macrophylla HOM05D001128 ORTHO05D000721 3.9e-09 66.6 401 26.7
Duzib106G0325 Durio zibethinus HOM05D001128 ORTHO05D000721 5.1e-09 66.2 303 29.4
MSTRG.5621 Avicennia marina HOM05D001128 ORTHO05D000721 6.7e-09 65.9 369 27.4
Migut.J00260 Erythranthe guttata HOM05D001128 ORTHO05D000721 8.7e-09 65.5 342 28.7
Atru.chr12.272 Acer truncatum HOM05D001128 ORTHO05D000721 1.5e-08 64.7 95 46.3
Actinidia29161 Actinidia chinensis HOM05D001128 ORTHO05D000721 1.9e-08 64.3 379 28.0
FAN09G1692 Fragaria x ananassa HOM05D001128 ORTHO05D000721 1.9e-08 64.3 264 30.3
Glyma.02G252700 Glycine max HOM05D001128 ORTHO05D000721 1.9e-08 64.3 143 38.5
Lsat_1_v5_gn_9_31700 Lactuca sativa HOM05D001128 ORTHO05D000721 1.9e-08 64.3 311 30.2
MD12G1155400 Malus domestica HOM05D001128 ORTHO05D000721 1.9e-08 64.3 368 28.5
HanXRQChr04g0124601 Helianthus annuus HOM05D001128 ORTHO05D000721 3.3e-08 63.5 248 27.4
ClCG11G006470 Citrullus lanatus HOM05D001128 ORTHO05D000721 4.3e-08 63.2 373 25.7
HPP92_026966 Vanilla planifolia HOM05D001128 ORTHO05D000721 4.3e-08 63.2 222 32.4
CSS0013156 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 7.4e-08 62.4 406 27.1
Cc02_g07190 Coffea canephora HOM05D001128 ORTHO05D000721 9.6e-08 62.0 148 37.8
Duzib093G0147 Durio zibethinus HOM05D001128 ORTHO05D000721 9.6e-08 62.0 355 27.0
Gorai.006G178800 Gossypium raimondii HOM05D001128 ORTHO05D000721 1.6e-07 61.2 375 28.0
Potri.016G105000 Populus trichocarpa HOM05D001128 ORTHO05D000721 1.6e-07 61.2 186 32.8
Lsat_1_v5_gn_2_116981 Lactuca sativa HOM05D001128 ORTHO05D000721 3.7e-07 60.1 347 29.1
HPP92_015345 Vanilla planifolia HOM05D001128 ORTHO05D000721 3.7e-07 60.1 233 31.3
SGA_v2.0_scaffold94G28557 Striga asiatica HOM05D001128 ORTHO05D000721 4.8e-07 59.7 357 27.7
EL10Ac2g04665 Beta vulgaris HOM05D001128 ORTHO05D000721 6.3e-07 59.3 360 28.6
COL.COLO4_14683 Corchorus olitorius HOM05D001128 ORTHO05D000721 8.2e-07 58.9 407 26.5
Haze_20899 Corylus avellana HOM05D001128 ORTHO05D000721 8.2e-07 58.9 133 36.1
CSS0004370 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 1.1e-06 58.5 369 27.6
Cfa017294 Carpinus fangiana HOM05D001128 ORTHO05D000721 1.4e-06 58.2 162 34.6
ATR0210G013 Amborella trichopoda HOM05D001128 ORTHO05D000721 1.8e-06 57.8 386 25.4
Rhsim05G0200600 Rhododendron simsii HOM05D001128 ORTHO05D000721 1.8e-06 57.8 380 25.8
Potri.006G093000 Populus trichocarpa HOM05D001128 ORTHO05D000721 2.4e-06 57.4 126 37.3
MSTRG.10240 Avicennia marina HOM05D001128 ORTHO05D000721 3.1e-06 57.0 332 27.7
Manes.09G099100 Manihot esculenta HOM05D001128 ORTHO05D000721 3.1e-06 57.0 365 25.5
Hma1.2p1_1521F.1_g288670 Hydrangea macrophylla HOM05D001128 ORTHO05D000721 5.3e-06 56.2 388 25.8
HPP92_018175 Vanilla planifolia HOM05D001128 ORTHO05D000721 5.3e-06 56.2 306 30.4
Gohir.A11G328200 Gossypium hirsutum HOM05D001128 ORTHO05D000721 6.9e-06 55.8 348 27.0
Nn2g13535 Nelumbo nucifera HOM05D001128 ORTHO05D000721 6.9e-06 55.8 374 25.7
Sed0002927 Sechium edule HOM05D001128 ORTHO05D000721 6.9e-06 55.8 320 26.6
TPR.G13630 Trifolium pratense HOM05D001128 ORTHO05D000721 6.9e-06 55.8 136 36.8


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