Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g09065 Brassica carinata HOM05D003476 ORTHO05D004057 3.0e-48 194.9 101 100.0
A05p06460 Brassica napus HOM05D003476 ORTHO05D004057 1.9e-39 165.6 100 87.0
A04p30180 Brassica napus HOM05D003476 ORTHO05D004057 2.4e-37 158.7 89 89.9
BcaB06g29118 Brassica carinata HOM05D003476 ORTHO05D004057 3.1e-37 158.3 89 89.9
BcaC02g07386 Brassica carinata HOM05D003476 ORTHO05D004057 3.1e-37 158.3 95 84.2
BolC4t28272H Brassica oleracea HOM05D003476 ORTHO05D004057 3.1e-37 158.3 95 84.2
C03p26520 Brassica napus HOM05D003476 ORTHO05D004057 2.0e-36 155.6 92 84.8
BcaC01g05451 Brassica carinata HOM05D003476 ORTHO05D004057 1.0e-35 153.3 90 85.6
BraA03t11468Z Brassica rapa HOM05D003476 ORTHO05D004057 1.0e-35 153.3 100 78.0
AL4G37540 Arabidopsis lyrata HOM05D003476 ORTHO05D004057 1.7e-35 152.5 98 80.6
AT2G39960 Arabidopsis thaliana HOM05D003476 ORTHO05D004057 2.9e-35 151.8 98 79.6
Sp4g22270 Schrenkiella parvula HOM05D003476 ORTHO05D004057 2.9e-35 151.8 98 79.6
Carub.0004s2209 Capsella rubella HOM05D003476 ORTHO05D004057 8.4e-35 150.2 98 78.6
BcaB01g03582 Brassica carinata HOM05D003476 ORTHO05D004057 1.1e-34 149.8 90 83.3
CARHR134890 Cardamine hirsuta HOM05D003476 ORTHO05D004057 1.1e-34 149.8 95 81.1
A03p22400 Brassica napus HOM05D003476 ORTHO05D004057 7.2e-34 147.1 98 77.6
CARHR253320 Cardamine hirsuta HOM05D003476 ORTHO05D004057 9.3e-34 146.7 95 75.8
THA.LOC104824307 Tarenaya hassleriana HOM05D003476 ORTHO05D004057 1.2e-33 146.4 98 76.5
AL6G47820 Arabidopsis lyrata HOM05D003476 ORTHO05D004057 1.3e-32 142.9 88 79.5
Thhalv10017265m.g Eutrema salsugineum HOM05D003476 ORTHO05D004057 2.3e-32 142.1 94 76.6
Carub.0006s3211 Capsella rubella HOM05D003476 ORTHO05D004057 3.0e-32 141.7 88 79.5
Prupe.1G392100 Prunus persica HOM05D003476 ORTHO05D004057 3.0e-32 141.7 88 76.1
MD15G1038100 Malus domestica HOM05D003476 ORTHO05D004057 5.1e-32 141.0 88 76.1
Sp6g04580 Schrenkiella parvula HOM05D003476 ORTHO05D004057 6.7e-32 140.6 97 75.3
THA.LOC104810073 Tarenaya hassleriana HOM05D003476 ORTHO05D004057 2.5e-31 138.7 98 70.4
MD08G1058400 Malus domestica HOM05D003476 ORTHO05D004057 4.3e-31 137.9 88 75.0
Gohir.D10G243900 Gossypium hirsutum HOM05D003476 ORTHO05D004057 5.7e-31 137.5 86 75.6
Ciclev10032786m.g Citrus clementina HOM05D003476 ORTHO05D004057 2.2e-30 135.6 85 76.5
Duzib128G2055 Durio zibethinus HOM05D003476 ORTHO05D004057 6.3e-30 134.0 86 75.6
Thhalv10028970m.g Eutrema salsugineum HOM05D003476 ORTHO05D004057 6.3e-30 134.0 79 83.5
Gohir.A10G229700 Gossypium hirsutum HOM05D003476 ORTHO05D004057 1.8e-29 132.5 86 75.6
RcHm_v2.0_Chr1g0369421 Rosa chinensis HOM05D003476 ORTHO05D004057 2.4e-29 132.1 88 71.6
Oeu039001.1 Olea europaea HOM05D003476 ORTHO05D004057 3.1e-29 131.7 88 72.7
Thecc.10G026100 Theobroma cacao HOM05D003476 ORTHO05D004057 3.1e-29 131.7 86 73.3
HanXRQChr12g0370541 Helianthus annuus HOM05D003476 ORTHO05D004057 4.1e-29 131.3 86 72.1
Actinidia13919 Actinidia chinensis HOM05D003476 ORTHO05D004057 9.0e-29 130.2 81 75.3
ClCG07G004000 Citrullus lanatus HOM05D003476 ORTHO05D004057 9.0e-29 130.2 78 78.2
ClCG07G004010 Citrullus lanatus HOM05D003476 ORTHO05D004057 9.0e-29 130.2 78 78.2
Potri.010G192700 Populus trichocarpa HOM05D003476 ORTHO05D004057 9.0e-29 130.2 99 64.6
Prupe.2G246300 Prunus persica HOM05D003476 ORTHO05D004057 1.2e-28 129.8 87 71.3
unitig_747.g21420 Utricularia gibba HOM05D003476 ORTHO05D004057 1.5e-28 129.4 82 73.2
Manes.07G125600 Manihot esculenta HOM05D003476 ORTHO05D004057 2.6e-28 128.6 86 72.1
COL.COLO4_25658 Corchorus olitorius HOM05D003476 ORTHO05D004057 3.4e-28 128.3 83 74.7
CiPaw.02G189900 Carya illinoinensis HOM05D003476 ORTHO05D004057 4.5e-28 127.9 86 68.6
SalBow6G1938 Salvia bowleyana HOM05D003476 ORTHO05D004057 4.5e-28 127.9 89 67.4
Gohir.A13G016600 Gossypium hirsutum HOM05D003476 ORTHO05D004057 5.9e-28 127.5 86 70.9
Gorai.011G280300 Gossypium raimondii HOM05D003476 ORTHO05D004057 5.9e-28 127.5 80 76.2
Oeu039509.1 Olea europaea HOM05D003476 ORTHO05D004057 5.9e-28 127.5 88 70.5
CANSAT56G1382 Cannabis sativa HOM05D003476 ORTHO05D004057 7.7e-28 127.1 89 74.2
Lj1A950T61 Lonicera japonica HOM05D003476 ORTHO05D004057 7.7e-28 127.1 83 71.1
Potri.008G064700 Populus trichocarpa HOM05D003476 ORTHO05D004057 7.7e-28 127.1 91 68.1
Sed0009203 Sechium edule HOM05D003476 ORTHO05D004057 7.7e-28 127.1 84 72.6
Rhsim13G0104300 Rhododendron simsii HOM05D003476 ORTHO05D004057 1.0e-27 126.7 88 69.3
Duzib106G0197 Durio zibethinus HOM05D003476 ORTHO05D004057 1.3e-27 126.3 100 64.0
vmacro10062 Vaccinium macrocarpon HOM05D003476 ORTHO05D004057 1.7e-27 125.9 89 69.7
arahy.Tifrunner.gnm1.ann1.7TWC5I Arachis hypogaea HOM05D003476 ORTHO05D004057 2.2e-27 125.6 84 70.2
Gohir.D13G017700 Gossypium hirsutum HOM05D003476 ORTHO05D004057 2.2e-27 125.6 86 69.8
Gorai.013G019600 Gossypium raimondii HOM05D003476 ORTHO05D004057 2.2e-27 125.6 83 72.3
Sabra08G0047500 Salix brachista HOM05D003476 ORTHO05D004057 2.2e-27 125.6 83 72.3
Sed0008497 Sechium edule HOM05D003476 ORTHO05D004057 2.2e-27 125.6 79 74.7
TAR633G0614 Trochodendron aralioides HOM05D003476 ORTHO05D004057 2.2e-27 125.6 81 72.8
FAN15G1698 Fragaria x ananassa HOM05D003476 ORTHO05D004057 2.9e-27 125.2 90 67.8
FAN03G0251 Fragaria x ananassa HOM05D003476 ORTHO05D004057 3.8e-27 124.8 83 71.1
arahy.Tifrunner.gnm1.ann1.C86U5P Arachis hypogaea HOM05D003476 ORTHO05D004057 5.0e-27 124.4 80 72.5
Migut.F01426 Erythranthe guttata HOM05D003476 ORTHO05D004057 5.0e-27 124.4 89 67.4
Eucgr.G03033 Eucalyptus grandis HOM05D003476 ORTHO05D004057 5.0e-27 124.4 98 64.3
GSVIVG01016365001 Vitis vinifera HOM05D003476 ORTHO05D004057 5.0e-27 124.4 81 72.8
Cfa001366 Carpinus fangiana HOM05D003476 ORTHO05D004057 6.5e-27 124.0 83 68.7
PGR142G4151 Punica granatum HOM05D003476 ORTHO05D004057 6.5e-27 124.0 96 66.7
MSTRG.8311 Avicennia marina HOM05D003476 ORTHO05D004057 1.1e-26 123.2 100 63.0
CiPaw.01G295800 Carya illinoinensis HOM05D003476 ORTHO05D004057 1.1e-26 123.2 86 67.4
Haze_17184 Corylus avellana HOM05D003476 ORTHO05D004057 1.1e-26 123.2 83 67.5
HanXRQChr08g0222281 Helianthus annuus HOM05D003476 ORTHO05D004057 1.1e-26 123.2 76 71.1
LjContig00357g0022102 Lotus japonicus HOM05D003476 ORTHO05D004057 1.1e-26 123.2 90 67.8
Atru.chr12.241 Acer truncatum HOM05D003476 ORTHO05D004057 1.4e-26 122.9 84 72.6
CSS0000698 Camellia sinensis var. sinensis HOM05D003476 ORTHO05D004057 1.4e-26 122.9 83 72.3
Lsat_1_v5_gn_5_2880 Lactuca sativa HOM05D003476 ORTHO05D004057 1.4e-26 122.9 82 69.5
VMungo0647G2503 Vigna mungo HOM05D003476 ORTHO05D004057 1.4e-26 122.9 80 72.5
ECA238G4332 Erigeron canadensis HOM05D003476 ORTHO05D004057 2.5e-26 122.1 88 65.9
Nitab4.5_0003770g0040 Nicotiana tabacum HOM05D003476 ORTHO05D004057 2.5e-26 122.1 88 65.9
Hma1.2p1_2137F.1_g314920 Hydrangea macrophylla HOM05D003476 ORTHO05D004057 3.2e-26 121.7 76 73.7
FAN06G4561 Fragaria x ananassa HOM05D003476 ORTHO05D004057 4.2e-26 121.3 78 74.4
TWI09G0086 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 4.2e-26 121.3 76 73.7
TWI23G0971 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 4.2e-26 121.3 76 73.7
MD01G1147400 Malus domestica HOM05D003476 ORTHO05D004057 5.5e-26 120.9 83 71.1
Cc02_g06900 Coffea canephora HOM05D003476 ORTHO05D004057 7.2e-26 120.6 92 64.1
BraA05t19614Z Brassica rapa HOM05D003476 ORTHO05D004057 1.2e-25 119.8 74 83.8
LjContig00357g0025168 Lotus japonicus HOM05D003476 ORTHO05D004057 1.6e-25 119.4 78 71.8
Manes.10G017601 Manihot esculenta HOM05D003476 ORTHO05D004057 1.6e-25 119.4 78 73.1
Medtr5g081900 Medicago truncatula HOM05D003476 ORTHO05D004057 1.6e-25 119.4 80 68.8
DCAR_011789 Daucus carota HOM05D003476 ORTHO05D004057 2.7e-25 118.6 95 63.2
FvH4_7g24030 Fragaria vesca HOM05D003476 ORTHO05D004057 2.7e-25 118.6 89 67.4
FAN01G1497 Fragaria x ananassa HOM05D003476 ORTHO05D004057 2.7e-25 118.6 89 67.4
Cpa.g.c40050 Carica papaya HOM05D003476 ORTHO05D004057 3.6e-25 118.2 75 73.3
Ca_05932_v3 Cicer arietinum L. HOM05D003476 ORTHO05D004057 4.6e-25 117.9 78 70.5
MELO3C025156.2 Cucumis melo HOM05D003476 ORTHO05D004057 4.6e-25 117.9 72 79.2
MBI16_g26377_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D004057 4.6e-25 117.9 87 63.2
SGA_v2.0_scaffold76G25080 Striga asiatica HOM05D003476 ORTHO05D004057 4.6e-25 117.9 83 69.9
TAR636G1152 Trochodendron aralioides HOM05D003476 ORTHO05D004057 4.6e-25 117.9 84 69.0
Sopen04g028030 Solanum pennellii HOM05D003476 ORTHO05D004057 6.1e-25 117.5 88 63.6
Phvul.008G226300 Phaseolus vulgaris HOM05D003476 ORTHO05D004057 1.0e-24 116.7 78 71.8
TPR.G8041 Trifolium pratense HOM05D003476 ORTHO05D004057 1.0e-24 116.7 78 70.5
TAR636G3666 Trochodendron aralioides HOM05D003476 ORTHO05D004057 1.0e-24 116.7 76 73.7
CAN.G1252.7 Capsicum annuum HOM05D003476 ORTHO05D004057 1.4e-24 116.3 76 71.1
PGSC0003DMG400025078 Solanum tuberosum HOM05D003476 ORTHO05D004057 1.4e-24 116.3 98 60.2
TWI53G1335 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 1.4e-24 116.3 76 69.7
Glyma.02G254500 Glycine max HOM05D003476 ORTHO05D004057 1.8e-24 115.9 78 70.5
Glyma.14G061900 Glycine max HOM05D003476 ORTHO05D004057 2.3e-24 115.5 78 71.8
RcHm_v2.0_Chr6g0299621 Rosa chinensis HOM05D003476 ORTHO05D004057 2.3e-24 115.5 84 69.0
Aqoxy214s003 Aquilegia oxysepala HOM05D003476 ORTHO05D004057 3.0e-24 115.2 79 69.6
Aqoxy4G02660 Aquilegia oxysepala HOM05D003476 ORTHO05D004057 3.0e-24 115.2 73 71.2
TWI73G1058 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 3.0e-24 115.2 76 71.1
Actinidia00934 Actinidia chinensis HOM05D003476 ORTHO05D004057 3.9e-24 114.8 73 76.7
Nitab4.5_0000099g0220 Nicotiana tabacum HOM05D003476 ORTHO05D004057 3.9e-24 114.8 83 66.3
Peaxi162Scf00360g00616 Petunia axillaris HOM05D003476 ORTHO05D004057 3.9e-24 114.8 73 74.0
Sc06g0000400 Simmondsia chinensis HOM05D003476 ORTHO05D004057 3.9e-24 114.8 80 70.0
Solyc04g072032.1 Solanum lycopersicum HOM05D003476 ORTHO05D004057 3.9e-24 114.8 98 60.2
EL10Ac2g04131 Beta vulgaris HOM05D003476 ORTHO05D004057 5.1e-24 114.4 79 67.1
TWI73G1048 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 8.8e-24 113.6 76 69.7
SpUn0110_0020 Schrenkiella parvula HOM05D003476 ORTHO05D004057 1.5e-23 112.8 73 80.8
vmacro06993 Vaccinium macrocarpon HOM05D003476 ORTHO05D004057 1.5e-23 112.8 71 73.2
PSO339G6737 Papaver somniferum HOM05D003476 ORTHO05D004057 3.3e-23 111.7 86 66.3
Nn5g27487 Nelumbo nucifera HOM05D003476 ORTHO05D004057 4.3e-23 111.3 78 67.9
PSO801G0598 Papaver somniferum HOM05D003476 ORTHO05D004057 4.3e-23 111.3 84 66.7
HPP92_016193 Vanilla planifolia HOM05D003476 ORTHO05D004057 5.7e-23 110.9 76 72.4
Nn2g13624 Nelumbo nucifera HOM05D003476 ORTHO05D004057 9.7e-23 110.2 83 63.9
AT4G04200 Arabidopsis thaliana HOM05D003476 ORTHO05D004057 1.7e-22 109.4 71 78.9
Os04g0446300 Oryza sativa ssp. japonica HOM05D003476 ORTHO05D004057 8.2e-22 107.1 90 56.7
Zm00001eb081650 Zea mays HOM05D003476 ORTHO05D004057 8.2e-22 107.1 82 62.2
Hma1.2p1_0710F.1_g207290 Hydrangea macrophylla HOM05D003476 ORTHO05D004057 4.1e-21 104.8 81 64.2
BolC4t22371H Brassica oleracea HOM05D003476 ORTHO05D004057 6.9e-21 104.0 61 88.5
ATR0618G113 Amborella trichopoda HOM05D003476 ORTHO05D004057 1.5e-20 102.8 75 64.0
C04p07540 Brassica napus HOM05D003476 ORTHO05D004057 1.5e-20 102.8 61 86.9
Os02g0565200 Oryza sativa ssp. japonica HOM05D003476 ORTHO05D004057 1.0e-19 100.1 76 63.2
Aa31LG5G19650 Aethionema arabicum HOM05D003476 ORTHO05D004057 1.3e-19 99.8 71 71.8
C04p67700 Brassica napus HOM05D003476 ORTHO05D004057 2.2e-19 99.0 61 83.6
SEGI_14870 Sequoiadendron giganteum HOM05D003476 ORTHO05D004057 9.4e-18 93.6 79 55.7
Pp3c8_24950 Physcomitrium patens HOM05D003476 ORTHO05D004057 3.6e-17 91.7 74 58.1
Pp3c24_20710 Physcomitrium patens HOM05D003476 ORTHO05D004057 6.1e-17 90.9 74 56.8
MBI16_g28612_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D000010 7.9e-17 90.5 82 56.1
Mapoly0043s0045 Marchantia polymorpha HOM05D003476 ORTHO05D004057 5.1e-16 87.8 73 56.2
CsaV3_5G008920 Cucumis sativus L. HOM05D003476 ORTHO05D004057 3.3e-15 85.1 63 65.1
MBI14_g25462_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D004057 7.4e-15 84.0 63 66.7
MBI14_g30458_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D000010 7.4e-15 84.0 63 66.7
Duzib114G0190 Durio zibethinus HOM05D003476 ORTHO05D004057 1.3e-14 83.2 61 65.6
Ah.10g035550 Amaranthus hybridus HOM05D003476 ORTHO05D004057 3.7e-14 81.6 68 57.4
AUR62031591 Chenopodium quinoa HOM05D003476 ORTHO05D004057 4.1e-13 78.2 70 51.4
AUR62012465 Chenopodium quinoa HOM05D003476 ORTHO05D004057 2.6e-12 75.5 62 56.5
MBI14_g06613_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D000010 3.5e-12 75.1 44 75.0
ECA233G2895 Erigeron canadensis HOM05D003476 ORTHO05D004057 5.9e-12 74.3 51 66.7
AagrBONN_evm.TU.Sc2ySwM_228.5500 Anthoceros agrestis HOM05D003476 ORTHO05D004057 1.7e-11 72.8 78 46.2
Ah.16g104950 Amaranthus hybridus HOM05D003476 ORTHO05D004057 1.9e-10 69.3 64 46.9
Migut.F01424 Erythranthe guttata HOM05D003476 ORTHO05D004057 1.9e-10 69.3 42 69.0
MD07G1214300 Malus domestica HOM05D003476 ORTHO05D004057 2.1e-09 65.9 43 69.8
Aa31LG9G9900 Aethionema arabicum HOM05D002056 ORTHO05D002289 3.6e-09 65.1 37 86.5
Cre12.g524200 Chlamydomonas reinhardtii HOM05D003476 ORTHO05D004057 4.7e-09 64.7 90 38.9
Psat2g035640 Pisum sativum HOM05D003476 ORTHO05D004057 4.7e-09 64.7 42 73.8
FvH4_2g40940 Fragaria vesca HOM05D003476 ORTHO05D004057 1.0e-08 63.5 95 42.1
Sabra10G0148300 Salix brachista HOM05D003476 ORTHO05D004057 1.8e-08 62.8 47 63.8
Hund03462 Selenicereus undatus HOM05D003476 ORTHO05D004057 2.3e-08 62.4 40 72.5
Sc09g0010500 Simmondsia chinensis HOM05D003476 ORTHO05D004057 3.0e-08 62.0 40 67.5
Aqoxy2G00973 Aquilegia oxysepala HOM05D003476 ORTHO05D004057 5.2e-08 61.2 41 70.7
BraA04t18491Z Brassica rapa HOM05D003476 ORTHO05D004057 1.1e-07 60.1 35 82.9
BolC3t15040H Brassica oleracea HOM05D003476 ORTHO05D004057 5.7e-07 57.8 35 80.0
PRCOL_00000631 Prasinoderma coloniale HOM05D003476 ORTHO05D004057 7.5e-07 57.4 74 44.6
Dinv34422 Davidia involucrata HOM05D002885 ORTHO05D003350 1.7e-06 56.2 44 63.6
CDE03G0334 Ceratophyllum demersum HOM05D003476 ORTHO05D004057 6.3e-06 54.3 38 68.4


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