Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g08930 Brassica carinata HOM05D007394 ORTHO05D009996 9.7e-58 226.5 106 100.0
BcaC02g12382 Brassica carinata HOM05D007394 ORTHO05D009996 2.3e-43 178.7 106 82.1
C04p04550 Brassica napus HOM05D007394 ORTHO05D009996 5.7e-42 174.1 103 81.6
A05p03830 Brassica napus HOM05D007394 ORTHO05D009996 6.1e-36 154.1 107 74.8
BcaB02g08929 Brassica carinata HOM05D007394 ORTHO05D009996 9.2e-32 140.2 106 67.0
BcaC02g12378 Brassica carinata HOM05D007394 ORTHO05D009996 5.0e-30 134.4 106 62.3
Sp4g25610 Schrenkiella parvula HOM05D007394 ORTHO05D009996 5.0e-30 134.4 100 71.0
BcaB02g08928 Brassica carinata HOM05D007394 ORTHO05D009996 1.5e-29 132.9 106 64.2
BraA05t19371Z Brassica rapa HOM05D007394 ORTHO05D009996 2.5e-29 132.1 106 64.2
A05p03840 Brassica napus HOM05D007394 ORTHO05D009996 7.3e-29 130.6 106 64.2
C04p04590 Brassica napus HOM05D007394 ORTHO05D009996 1.2e-28 129.8 107 61.7
A04p32800 Brassica napus HOM05D007394 ORTHO05D009996 3.6e-28 128.3 107 61.7
BolC4t22090H Brassica oleracea HOM05D007394 ORTHO05D009996 3.6e-28 128.3 107 60.7
BraA04t18742Z Brassica rapa HOM05D007394 ORTHO05D009996 3.6e-28 128.3 107 61.7
BraA05t19373Z Brassica rapa HOM05D007394 ORTHO05D009996 4.7e-28 127.9 104 60.6
A04p32790 Brassica napus HOM05D007394 ORTHO05D009996 1.8e-27 125.9 100 63.0
BcaC02g12381 Brassica carinata HOM05D007394 ORTHO05D009996 5.2e-27 124.4 107 61.7
AL1G53780 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 2.6e-26 122.1 99 61.6
AT1G47540 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 5.8e-26 120.9 99 59.6
BcaB02g10434 Brassica carinata HOM05D007394 ORTHO05D009996 2.2e-25 119.0 104 55.8
C04p70500 Brassica napus HOM05D007394 ORTHO05D009996 2.9e-25 118.6 103 59.2
CARHR138620 Cardamine hirsuta HOM05D007394 ORTHO05D009996 1.9e-24 115.9 88 59.1
BcaB06g29320 Brassica carinata HOM05D007394 ORTHO05D009996 5.4e-24 114.4 103 58.3
Sp4g25600 Schrenkiella parvula HOM05D007394 ORTHO05D009996 5.4e-24 114.4 92 58.7
AL4G42320 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 7.0e-24 114.0 96 60.4
A03p24300 Brassica napus HOM05D007394 ORTHO05D009996 7.0e-24 114.0 90 66.7
BraA03t11640Z Brassica rapa HOM05D007394 ORTHO05D009996 7.0e-24 114.0 90 66.7
Sp3g24100 Schrenkiella parvula HOM05D007394 ORTHO05D009996 9.2e-24 113.6 93 60.2
BcaB06g29321 Brassica carinata HOM05D007394 ORTHO05D009996 1.2e-23 113.2 83 63.9
BcaB06g29322 Brassica carinata HOM05D007394 ORTHO05D009996 1.2e-23 113.2 80 65.0
A04p32810 Brassica napus HOM05D007394 ORTHO05D009996 1.2e-23 113.2 106 56.6
BraA04t18743Z Brassica rapa HOM05D007394 ORTHO05D009996 1.2e-23 113.2 106 56.6
AL2G24960 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 2.0e-23 112.5 91 61.5
BraA03t11638Z Brassica rapa HOM05D007394 ORTHO05D009996 2.0e-23 112.5 90 65.6
CARHR138610 Cardamine hirsuta HOM05D007394 ORTHO05D009996 2.7e-23 112.1 92 60.9
Carub.0004s2599 Capsella rubella HOM05D007394 ORTHO05D009996 3.5e-23 111.7 101 54.5
Carub.0004s2602 Capsella rubella HOM05D007394 ORTHO05D009996 4.6e-23 111.3 94 56.4
A03p24290 Brassica napus HOM05D007394 ORTHO05D009996 6.0e-23 110.9 93 61.3
C04p70530 Brassica napus HOM05D007394 ORTHO05D009996 6.0e-23 110.9 106 56.6
BraA03t11637Z Brassica rapa HOM05D007394 ORTHO05D009996 6.0e-23 110.9 93 61.3
BraA03t11639Z Brassica rapa HOM05D007394 ORTHO05D009996 6.0e-23 110.9 93 61.3
BolC4t28552H Brassica oleracea HOM05D007394 ORTHO05D009996 1.0e-22 110.2 106 57.5
BcaC02g12386 Brassica carinata HOM05D007394 ORTHO05D009996 1.3e-22 109.8 89 56.2
C04p04520 Brassica napus HOM05D007394 ORTHO05D009996 1.3e-22 109.8 89 56.2
BcaC01g05230 Brassica carinata HOM05D007394 ORTHO05D009996 1.7e-22 109.4 90 65.6
AT2G43535 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 2.3e-22 109.0 78 61.5
Thhalv10001746m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 2.3e-22 109.0 92 57.6
BcaC02g12384 Brassica carinata HOM05D007394 ORTHO05D009996 3.0e-22 108.6 83 57.8
C04p04540 Brassica napus HOM05D007394 ORTHO05D009996 3.0e-22 108.6 83 57.8
BolC4t22087H Brassica oleracea HOM05D007394 ORTHO05D009996 3.0e-22 108.6 83 57.8
AL4G42310 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 3.9e-22 108.2 89 59.6
Carub.0004s2598 Capsella rubella HOM05D007394 ORTHO05D009996 3.9e-22 108.2 92 56.5
BcaB02g08934 Brassica carinata HOM05D007394 ORTHO05D009996 5.0e-22 107.8 89 56.2
AT2G43510 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 6.6e-22 107.5 84 59.5
Carub.0002s0551 Capsella rubella HOM05D007394 ORTHO05D009996 8.6e-22 107.1 92 55.4
THA.LOC104798701 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.1e-21 106.7 91 59.3
A05p03820 Brassica napus HOM05D007394 ORTHO05D009996 1.9e-21 105.9 89 53.9
AL4G42300 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 2.5e-21 105.5 84 59.5
AL8G26520 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 4.3e-21 104.8 93 52.7
BcaC02g07171 Brassica carinata HOM05D007394 ORTHO05D009996 9.5e-21 103.6 106 53.8
BcaB01g03378 Brassica carinata HOM05D007394 ORTHO05D009996 1.2e-20 103.2 92 59.8
BcaB06g29323 Brassica carinata HOM05D007394 ORTHO05D009996 2.8e-20 102.1 84 56.0
Thhalv10001697m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 2.8e-20 102.1 90 60.0
THA.LOC104803941 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 3.6e-20 101.7 94 54.3
Aa31LG1G25260 Aethionema arabicum HOM05D007394 ORTHO05D009996 4.7e-20 101.3 89 55.1
CARHR138630 Cardamine hirsuta HOM05D007394 ORTHO05D009996 4.7e-20 101.3 91 56.0
THA.LOC104803932 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.8e-19 99.4 94 52.1
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 2.3e-19 99.0 88 53.4
AT2G43520 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 2.3e-19 99.0 89 55.1
Carub.0004s2597 Capsella rubella HOM05D007394 ORTHO05D009996 4.0e-19 98.2 86 52.3
THA.LOC109116252 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 4.0e-19 98.2 92 54.3
BcaC02g07172 Brassica carinata HOM05D007394 ORTHO05D009996 8.9e-19 97.1 80 56.2
CARHR138640 Cardamine hirsuta HOM05D007394 ORTHO05D009996 3.4e-18 95.1 99 50.5
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 9.8e-18 93.6 68 63.2
THA.LOC104805814 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 4.9e-17 91.3 92 46.7
BolC3t15251H Brassica oleracea HOM05D007394 ORTHO05D009996 6.4e-17 90.9 69 71.0
AT2G43550 Arabidopsis thaliana HOM05D007394 ORTHO05D015383 2.4e-16 89.0 92 47.8
CARHR138650 Cardamine hirsuta HOM05D007394 ORTHO05D009996 2.4e-16 89.0 99 41.4
AL4G42350 Arabidopsis lyrata HOM05D007394 ORTHO05D015383 9.2e-16 87.0 91 45.1
Sp3g24200 Schrenkiella parvula HOM05D007394 ORTHO05D009996 2.1e-15 85.9 92 52.2
Aa31LG1G24860 Aethionema arabicum HOM05D007394 ORTHO05D009996 1.0e-14 83.6 69 53.6
C04p70540 Brassica napus HOM05D007394 ORTHO05D015383 2.3e-14 82.4 92 47.8
Carub.0004s2603 Capsella rubella HOM05D007394 ORTHO05D015383 2.3e-14 82.4 91 42.9
CARHR138680 Cardamine hirsuta HOM05D007394 ORTHO05D015383 3.0e-14 82.0 91 46.2
Sp4g02290 Schrenkiella parvula HOM05D007394 ORTHO05D009234 3.9e-14 81.6 93 46.2
BcaB06g29326 Brassica carinata HOM05D007394 ORTHO05D015383 1.5e-13 79.7 92 46.7
BcaC02g07166 Brassica carinata HOM05D007394 ORTHO05D015383 1.5e-13 79.7 92 46.7
BolC4t28555H Brassica oleracea HOM05D007394 ORTHO05D015383 1.5e-13 79.7 92 46.7
A04p32830 Brassica napus HOM05D007394 ORTHO05D015383 1.9e-13 79.3 92 46.7
BraA04t18745Z Brassica rapa HOM05D007394 ORTHO05D015383 1.9e-13 79.3 92 46.7
Carub.0004s2604 Capsella rubella HOM05D007394 ORTHO05D009996 1.9e-13 79.3 100 44.0
THA.LOC104803922 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 7.3e-13 77.4 93 47.3
THA.LOC104803915 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.2e-12 76.6 89 46.1
Thhalv10001696m.g Eutrema salsugineum HOM05D007394 ORTHO05D015383 2.1e-12 75.9 93 43.0
Sp4g25660 Schrenkiella parvula HOM05D007394 ORTHO05D015383 2.8e-12 75.5 90 43.3
AT2G43530 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 3.6e-12 75.1 89 46.1
C04p70470 Brassica napus HOM05D007394 ORTHO05D009234 7.6e-10 67.4 94 44.7
A04p32770 Brassica napus HOM05D007394 ORTHO05D033140 1.3e-09 66.6 92 44.6
BraA04t18740Z Brassica rapa HOM05D007394 ORTHO05D033140 1.3e-09 66.6 92 44.6
A04p32760 Brassica napus HOM05D007394 ORTHO05D009234 1.7e-09 66.2 94 43.6
BolC4t28551H Brassica oleracea HOM05D007394 ORTHO05D033140 2.9e-09 65.5 91 40.7
CARHR123510 Cardamine hirsuta HOM05D014590 ORTHO05D017585 1.4e-08 63.2 95 42.1
BcaB06g29325 Brassica carinata HOM05D007394 ORTHO05D032247 9.2e-08 60.5 86 37.2
Carub.0004s2601 Capsella rubella HOM05D007394 ORTHO05D009996 1.3e-06 56.6 92 34.8


User provided reference genes

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