Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g08928 Brassica carinata HOM05D007394 ORTHO05D009996 1.1e-55 219.5 102 100.0
BraA05t19371Z Brassica rapa HOM05D007394 ORTHO05D009996 3.3e-55 218.0 102 99.0
A05p03840 Brassica napus HOM05D007394 ORTHO05D009996 9.7e-55 216.5 102 98.0
BcaC02g12381 Brassica carinata HOM05D007394 ORTHO05D009996 4.1e-53 211.1 103 97.1
C04p04550 Brassica napus HOM05D007394 ORTHO05D009996 3.1e-45 184.9 80 100.0
BcaB02g08929 Brassica carinata HOM05D007394 ORTHO05D009996 1.1e-42 176.4 102 81.4
BcaC02g12378 Brassica carinata HOM05D007394 ORTHO05D009996 9.1e-37 156.8 102 74.5
Sp4g25610 Schrenkiella parvula HOM05D007394 ORTHO05D009996 9.1e-37 156.8 98 73.5
BcaC02g12382 Brassica carinata HOM05D007394 ORTHO05D009996 3.5e-36 154.8 102 69.6
A05p03830 Brassica napus HOM05D007394 ORTHO05D009996 2.2e-35 152.1 103 71.8
C04p04590 Brassica napus HOM05D007394 ORTHO05D009996 2.2e-35 152.1 103 73.8
BolC4t22090H Brassica oleracea HOM05D007394 ORTHO05D009996 6.5e-35 150.6 103 72.8
BraA05t19373Z Brassica rapa HOM05D007394 ORTHO05D009996 1.5e-34 149.4 101 73.3
Carub.0004s2598 Capsella rubella HOM05D007394 ORTHO05D009996 1.8e-32 142.5 92 68.5
AL4G42310 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 2.6e-31 138.7 90 68.9
A03p24290 Brassica napus HOM05D007394 ORTHO05D009996 3.4e-31 138.3 93 68.8
BraA03t11637Z Brassica rapa HOM05D007394 ORTHO05D009996 3.4e-31 138.3 93 68.8
BraA03t11639Z Brassica rapa HOM05D007394 ORTHO05D009996 3.4e-31 138.3 93 68.8
Thhalv10001746m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 9.8e-31 136.7 92 66.3
CARHR138620 Cardamine hirsuta HOM05D007394 ORTHO05D009996 1.3e-30 136.3 92 64.1
BcaB02g08930 Brassica carinata HOM05D007394 ORTHO05D009996 2.8e-30 135.2 106 64.2
A04p32800 Brassica napus HOM05D007394 ORTHO05D009996 4.8e-30 134.4 98 66.3
BraA04t18742Z Brassica rapa HOM05D007394 ORTHO05D009996 4.8e-30 134.4 98 66.3
C04p70500 Brassica napus HOM05D007394 ORTHO05D009996 6.3e-30 134.0 100 64.0
BcaB02g10434 Brassica carinata HOM05D007394 ORTHO05D009996 2.4e-29 132.1 102 60.8
AT2G43520 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 3.1e-29 131.7 90 65.6
C04p70530 Brassica napus HOM05D007394 ORTHO05D009996 3.1e-29 131.7 105 62.9
AT1G47540 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 4.1e-29 131.3 95 61.1
AL2G24960 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 5.4e-29 131.0 92 67.4
AL4G42320 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 7.0e-29 130.6 100 59.0
CARHR138610 Cardamine hirsuta HOM05D007394 ORTHO05D009996 7.0e-29 130.6 93 67.7
Sp4g25600 Schrenkiella parvula HOM05D007394 ORTHO05D009996 9.1e-29 130.2 92 63.0
AL1G53780 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.6e-28 129.4 95 61.1
Carub.0004s2597 Capsella rubella HOM05D007394 ORTHO05D009996 1.6e-28 129.4 87 64.4
Thhalv10001697m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 2.0e-28 129.0 91 67.0
BolC4t28552H Brassica oleracea HOM05D007394 ORTHO05D009996 2.7e-28 128.6 105 61.9
A05p03820 Brassica napus HOM05D007394 ORTHO05D009996 7.7e-28 127.1 90 63.3
Sp3g24100 Schrenkiella parvula HOM05D007394 ORTHO05D009996 7.7e-28 127.1 95 62.1
AT2G43510 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 1.0e-27 126.7 90 64.4
BcaC02g12386 Brassica carinata HOM05D007394 ORTHO05D009996 1.0e-27 126.7 90 63.3
C04p04520 Brassica napus HOM05D007394 ORTHO05D009996 1.0e-27 126.7 90 63.3
Carub.0004s2599 Capsella rubella HOM05D007394 ORTHO05D009996 1.0e-27 126.7 97 55.7
BcaB06g29320 Brassica carinata HOM05D007394 ORTHO05D009996 1.3e-27 126.3 100 61.0
CARHR138630 Cardamine hirsuta HOM05D007394 ORTHO05D009996 1.7e-27 125.9 91 62.6
BcaB01g03378 Brassica carinata HOM05D007394 ORTHO05D009996 2.3e-27 125.6 92 62.0
BcaB02g08934 Brassica carinata HOM05D007394 ORTHO05D009996 2.9e-27 125.2 90 62.2
A04p32810 Brassica napus HOM05D007394 ORTHO05D009996 2.9e-27 125.2 104 59.6
BraA04t18743Z Brassica rapa HOM05D007394 ORTHO05D009996 2.9e-27 125.2 104 59.6
CARHR138640 Cardamine hirsuta HOM05D007394 ORTHO05D009996 5.0e-27 124.4 97 59.8
AL8G26520 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.5e-26 122.9 93 59.1
BcaB06g29322 Brassica carinata HOM05D007394 ORTHO05D009996 4.2e-26 121.3 76 67.1
BcaC02g12384 Brassica carinata HOM05D007394 ORTHO05D009996 4.2e-26 121.3 90 61.1
A03p24300 Brassica napus HOM05D007394 ORTHO05D009996 4.2e-26 121.3 91 62.6
A04p32790 Brassica napus HOM05D007394 ORTHO05D009996 4.2e-26 121.3 98 60.2
C04p04540 Brassica napus HOM05D007394 ORTHO05D009996 4.2e-26 121.3 92 59.8
BolC4t22087H Brassica oleracea HOM05D007394 ORTHO05D009996 4.2e-26 121.3 92 59.8
BraA03t11638Z Brassica rapa HOM05D007394 ORTHO05D009996 4.2e-26 121.3 91 62.6
BraA03t11640Z Brassica rapa HOM05D007394 ORTHO05D009996 4.2e-26 121.3 91 62.6
AL4G42300 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 7.2e-26 120.6 90 62.2
BcaC02g07171 Brassica carinata HOM05D007394 ORTHO05D009996 2.1e-25 119.0 107 58.9
THA.LOC104803932 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 2.8e-25 118.6 96 59.4
Carub.0004s2602 Capsella rubella HOM05D007394 ORTHO05D009996 6.1e-25 117.5 100 54.0
BcaB06g29321 Brassica carinata HOM05D007394 ORTHO05D009996 8.0e-25 117.1 73 68.5
BcaC01g05230 Brassica carinata HOM05D007394 ORTHO05D009996 1.0e-24 116.7 91 61.5
Carub.0002s0551 Capsella rubella HOM05D007394 ORTHO05D009996 2.3e-24 115.5 92 54.3
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 3.0e-24 115.2 87 60.9
AT2G43535 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 3.0e-24 115.2 75 62.7
Sp3g24200 Schrenkiella parvula HOM05D007394 ORTHO05D009996 3.0e-24 115.2 92 57.6
Aa31LG1G25260 Aethionema arabicum HOM05D007394 ORTHO05D009996 4.0e-24 114.8 94 60.6
THA.LOC104803941 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 4.0e-24 114.8 92 60.9
THA.LOC109116252 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 2.0e-23 112.5 96 57.3
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 1.7e-22 109.4 78 62.8
BcaC02g07172 Brassica carinata HOM05D007394 ORTHO05D009996 1.7e-22 109.4 76 61.8
THA.LOC104798701 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.8e-21 105.9 91 57.1
CARHR138650 Cardamine hirsuta HOM05D007394 ORTHO05D009996 2.0e-20 102.4 98 45.9
THA.LOC104805814 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.0e-19 100.1 92 46.7
Sp4g02290 Schrenkiella parvula HOM05D007394 ORTHO05D009234 1.5e-18 96.3 91 48.4
BolC3t15251H Brassica oleracea HOM05D007394 ORTHO05D009996 3.3e-18 95.1 71 64.8
BcaB06g29323 Brassica carinata HOM05D007394 ORTHO05D009996 7.3e-18 94.0 76 52.6
Aa31LG1G24860 Aethionema arabicum HOM05D007394 ORTHO05D009996 1.2e-17 93.2 66 62.1
THA.LOC104803915 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 2.8e-17 92.0 89 51.7
AL4G42350 Arabidopsis lyrata HOM05D007394 ORTHO05D015383 1.0e-16 90.1 87 51.7
AT2G43550 Arabidopsis thaliana HOM05D007394 ORTHO05D015383 1.8e-16 89.4 88 51.1
Carub.0004s2604 Capsella rubella HOM05D007394 ORTHO05D009996 5.2e-16 87.8 106 43.4
AT2G43530 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 2.0e-15 85.9 90 47.8
Carub.0004s2603 Capsella rubella HOM05D007394 ORTHO05D015383 2.0e-15 85.9 87 49.4
THA.LOC104803922 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 4.4e-15 84.7 98 45.9
CARHR138680 Cardamine hirsuta HOM05D007394 ORTHO05D015383 5.8e-15 84.3 87 49.4
BolC4t28551H Brassica oleracea HOM05D007394 ORTHO05D033140 1.3e-14 83.2 91 46.2
A04p32770 Brassica napus HOM05D007394 ORTHO05D033140 2.2e-14 82.4 91 49.5
BraA04t18740Z Brassica rapa HOM05D007394 ORTHO05D033140 2.2e-14 82.4 91 49.5
Thhalv10001696m.g Eutrema salsugineum HOM05D007394 ORTHO05D015383 3.7e-14 81.6 85 48.2
Sp4g25660 Schrenkiella parvula HOM05D007394 ORTHO05D015383 3.7e-14 81.6 87 46.0
BcaB06g29326 Brassica carinata HOM05D007394 ORTHO05D015383 4.9e-14 81.3 88 47.7
BcaC02g07166 Brassica carinata HOM05D007394 ORTHO05D015383 4.9e-14 81.3 88 47.7
BolC4t28555H Brassica oleracea HOM05D007394 ORTHO05D015383 4.9e-14 81.3 88 47.7
A04p32830 Brassica napus HOM05D007394 ORTHO05D015383 6.4e-14 80.9 88 47.7
BraA04t18745Z Brassica rapa HOM05D007394 ORTHO05D015383 6.4e-14 80.9 88 47.7
C04p70540 Brassica napus HOM05D007394 ORTHO05D015383 2.4e-13 79.0 88 47.7
Thhalv10001701m.g Eutrema salsugineum HOM05D007394 ORTHO05D032247 5.4e-13 77.8 88 46.6
CARHR123510 Cardamine hirsuta HOM05D014590 ORTHO05D017585 9.2e-13 77.0 98 42.9
C04p70470 Brassica napus HOM05D007394 ORTHO05D009234 7.8e-12 73.9 94 44.7
BcaB06g29325 Brassica carinata HOM05D007394 ORTHO05D032247 1.7e-11 72.8 88 40.9
A04p32760 Brassica napus HOM05D007394 ORTHO05D009234 1.7e-11 72.8 94 43.6
Carub.0004s2601 Capsella rubella HOM05D007394 ORTHO05D009996 1.9e-10 69.3 93 39.8
BcaC02g07167 Brassica carinata HOM05D007394 ORTHO05D032247 3.3e-10 68.6 88 38.6
Carub.0005s2631 Capsella rubella HOM05D014590 ORTHO05D017585 6.8e-08 60.8 91 37.4


User provided reference genes

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