Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g08791 Brassica carinata HOM05D000621 ORTHO05D016750 1.1e-99 366.7 190 100.0
BraA05t19058Z Brassica rapa HOM05D000621 ORTHO05D000421 1.2e-29 134.0 248 41.9
C04p00660 Brassica napus HOM05D000621 ORTHO05D000421 1.0e-28 131.0 247 40.9
A05p00610 Brassica napus HOM05D000621 ORTHO05D000421 1.3e-28 130.6 248 41.5
BolC4t21699H Brassica oleracea HOM05D000621 ORTHO05D000421 1.6e-23 113.6 241 38.6
BcaB06g29457 Brassica carinata HOM05D000621 ORTHO05D000421 2.4e-22 109.8 260 36.2
BcaC02g12582 Brassica carinata HOM05D000621 ORTHO05D000421 6.5e-20 101.7 281 33.5
CARHR142620 Cardamine hirsuta HOM05D000621 ORTHO05D000421 8.2e-15 84.7 255 32.9
Thhalv10001340m.g Eutrema salsugineum HOM05D000621 ORTHO05D000421 4.1e-14 82.4 63 65.1
CARHR011680 Cardamine hirsuta HOM05D000621 ORTHO05D016750 5.9e-13 78.6 142 39.4
BcaC02g10295 Brassica carinata HOM05D000621 ORTHO05D000421 5.0e-12 75.5 154 35.1
Carub.0004s2996 Capsella rubella HOM05D000621 ORTHO05D000421 1.9e-11 73.6 120 40.8
THA.LOC104802141 Tarenaya hassleriana HOM05D000621 ORTHO05D000421 7.2e-11 71.6 122 34.4
A04p00620 Brassica napus HOM05D000621 ORTHO05D000421 1.6e-10 70.5 141 36.2
BraA04t15783Z Brassica rapa HOM05D000621 ORTHO05D000421 1.6e-10 70.5 141 36.2
AL1G22510 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 2.1e-10 70.1 124 38.7
THA.LOC104817448 Tarenaya hassleriana HOM05D000621 ORTHO05D000421 2.7e-10 69.7 112 38.4
BcaB02g08112 Brassica carinata HOM05D000621 ORTHO05D000421 6.1e-10 68.6 132 35.6
C04p30710 Brassica napus HOM05D000621 ORTHO05D000421 6.1e-10 68.6 141 35.5
BolC4t24590H Brassica oleracea HOM05D000621 ORTHO05D000421 6.1e-10 68.6 132 34.8
AL1G39190 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 7.9e-10 68.2 236 30.9
C08p37180 Brassica napus HOM05D000621 ORTHO05D000421 5.1e-09 65.5 104 40.4
A09p54300 Brassica napus HOM05D000621 ORTHO05D000421 8.8e-09 64.7 104 40.4
BraA09t40842Z Brassica rapa HOM05D000621 ORTHO05D000421 8.8e-09 64.7 104 40.4
Thhalv10005813m.g Eutrema salsugineum HOM05D000621 ORTHO05D000421 8.8e-09 64.7 142 35.2
BcaC07g40715 Brassica carinata HOM05D000621 ORTHO05D000421 1.5e-08 63.9 104 39.4
BolC8t51295H Brassica oleracea HOM05D000621 ORTHO05D000421 1.5e-08 63.9 104 39.4
BcaB02g07341 Brassica carinata HOM05D000621 ORTHO05D000421 1.3e-07 60.8 109 33.9
BcaB04g18122 Brassica carinata HOM05D000621 ORTHO05D000421 2.2e-07 60.1 94 40.4
Sp5g01090 Schrenkiella parvula HOM05D000621 ORTHO05D000421 2.2e-07 60.1 108 37.0
AL4G46780 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 2.8e-07 59.7 120 37.5
BraA07t30241Z Brassica rapa HOM05D000621 ORTHO05D000421 2.8e-07 59.7 141 32.6
AT1G03300 Arabidopsis thaliana HOM05D000621 ORTHO05D000421 3.7e-07 59.3 119 37.0
BcaC07g42745 Brassica carinata HOM05D000621 ORTHO05D000421 3.7e-07 59.3 106 37.7
A07p25940 Brassica napus HOM05D000049 ORTHO05D000421 3.7e-07 59.3 141 32.6
Carub.0001s2450 Capsella rubella HOM05D000621 ORTHO05D000421 4.8e-07 58.9 107 39.3
AL5G45060 Arabidopsis lyrata HOM05D000621 ORTHO05D000421 1.1e-06 57.8 112 35.7
BcaC09g47887 Brassica carinata HOM05D000621 ORTHO05D000421 1.1e-06 57.8 162 30.9
A01p41160 Brassica napus HOM05D000621 ORTHO05D016750 1.4e-06 57.4 103 40.8
BNapus_Darmor_BZH_scaffold_78p00560 Brassica napus HOM05D000621 ORTHO05D016750 1.4e-06 57.4 103 40.8
BcaC07g42742 Brassica carinata HOM05D000621 ORTHO05D000421 2.4e-06 56.6 142 35.9
AT2G47230 Arabidopsis thaliana HOM05D000621 ORTHO05D000421 3.1e-06 56.2 120 36.7
CARHR025430 Cardamine hirsuta HOM05D000621 ORTHO05D000421 7.0e-06 55.1 106 39.6


User provided reference genes

Program Settings