Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g08726 Brassica carinata HOM05D011411 ORTHO05D006440 5.9e-58 227.6 143 100.0
A05p00100 Brassica napus HOM05D011411 ORTHO05D006440 1.5e-48 196.4 143 88.1
BraA05t19006Z Brassica rapa HOM05D011411 ORTHO05D006440 1.5e-48 196.4 143 88.1
C04p00020 Brassica napus HOM05D011411 ORTHO05D006440 1.9e-48 196.1 143 88.1
BcaC02g12535 Brassica carinata HOM05D011411 ORTHO05D006440 5.5e-48 194.5 143 88.1
BolC4t21649H Brassica oleracea HOM05D011411 ORTHO05D006440 5.5e-48 194.5 143 88.1
Carub.0004s3065 Capsella rubella HOM05D011411 ORTHO05D006440 1.9e-40 169.5 138 72.5
Sp4g29850 Schrenkiella parvula HOM05D011411 ORTHO05D006440 1.9e-40 169.5 140 79.3
AL39U10120 Arabidopsis lyrata HOM05D011411 ORTHO05D006440 1.6e-39 166.4 138 71.7
AL4G47520 Arabidopsis lyrata HOM05D011411 ORTHO05D006440 1.6e-39 166.4 138 71.7
AT2G47930 Arabidopsis thaliana HOM05D011411 ORTHO05D006440 4.7e-39 164.9 140 79.3
CARHR143320 Cardamine hirsuta HOM05D011411 ORTHO05D006440 2.8e-36 155.6 139 73.4
A04p35130 Brassica napus HOM05D011411 ORTHO05D006440 1.8e-35 152.9 139 72.7
BolC4t28784H Brassica oleracea HOM05D000915 ORTHO05D001662 2.0e-34 149.4 138 68.8
BcaC02g06998 Brassica carinata HOM05D011411 ORTHO05D006440 3.5e-34 148.7 138 68.1
BraA04t18949Z Brassica rapa HOM05D011411 ORTHO05D006440 1.1e-32 143.7 131 74.0
Thhalv10001715m.g Eutrema salsugineum HOM05D011411 ORTHO05D006440 1.5e-32 143.3 134 69.4
Aa31LG1G29360 Aethionema arabicum HOM05D011411 ORTHO05D006440 4.7e-31 138.3 140 65.7
Nitab4.5_0002093g0180 Nicotiana tabacum HOM05D000530 ORTHO05D000621 1.2e-07 60.5 121 43.0
PGSC0003DMG400031864 Solanum tuberosum HOM05D007701 ORTHO05D006440 1.2e-07 60.5 133 43.6
Nitab4.5_0004150g0050 Nicotiana tabacum HOM05D007701 ORTHO05D006440 2.1e-07 59.7 138 41.3
Sopen09g029300 Solanum pennellii HOM05D007701 ORTHO05D006440 6.2e-07 58.2 132 42.4
Solyc09g074450.1 Solanum lycopersicum HOM05D007701 ORTHO05D006440 2.4e-06 56.2 132 41.7
CAN.G2895.2 Capsicum annuum HOM05D007701 ORTHO05D006440 5.2e-06 55.1 126 45.2


User provided reference genes

Program Settings