Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g08689 Brassica carinata HOM05D004738 ORTHO05D006439 8.7e-273 943.0 454 100.0
BraA07t32032Z Brassica rapa HOM05D004738 ORTHO05D006439 5.7e-256 887.1 454 94.5
BcaC08g47585 Brassica carinata HOM05D004738 ORTHO05D006439 2.4e-254 881.7 454 93.8
C06p54140 Brassica napus HOM05D004738 ORTHO05D006439 6.9e-254 880.2 454 93.6
BolC6t40426H Brassica oleracea HOM05D004738 ORTHO05D006439 1.8e-249 865.5 485 87.8
A07p45280 Brassica napus HOM05D004738 ORTHO05D006439 5.2e-249 864.0 455 93.2
BraA02t07352Z Brassica rapa HOM05D004738 ORTHO05D006439 9.8e-232 806.6 461 87.4
A02p23600 Brassica napus HOM05D004738 ORTHO05D006439 1.1e-230 803.1 461 87.0
Thhalv10018540m.g Eutrema salsugineum HOM05D004738 ORTHO05D006439 2.0e-229 798.9 456 87.3
BraA07t30308Z Brassica rapa HOM05D004738 ORTHO05D006439 5.9e-229 797.3 463 86.4
Sp5g35430 Schrenkiella parvula HOM05D004738 ORTHO05D006439 7.7e-229 797.0 460 86.7
BcaC08g45309 Brassica carinata HOM05D004738 ORTHO05D006439 3.8e-228 794.7 462 86.4
BolC6t38077H Brassica oleracea HOM05D004738 ORTHO05D006439 3.8e-228 794.7 462 86.4
C02p37360 Brassica napus HOM05D004738 ORTHO05D006439 6.1e-226 787.3 464 85.1
BolC2t09746H Brassica oleracea HOM05D004738 ORTHO05D006439 3.4e-224 781.6 465 84.1
CARHR074130 Cardamine hirsuta HOM05D004738 ORTHO05D006439 1.2e-221 773.1 458 84.3
BcaB02g07276 Brassica carinata HOM05D004738 ORTHO05D006439 2.1e-218 762.3 463 83.2
AL2G41120 Arabidopsis lyrata HOM05D004738 ORTHO05D006439 5.2e-217 757.7 463 82.9
Carub.0002s2719 Capsella rubella HOM05D004738 ORTHO05D006439 7.5e-216 753.8 456 82.0
C06p29130 Brassica napus HOM05D004738 ORTHO05D006439 5.8e-208 727.6 451 81.8
A07p26650 Brassica napus HOM05D004738 ORTHO05D006439 1.3e-207 726.5 451 80.9
Aa31LG4G650 Aethionema arabicum HOM05D004738 ORTHO05D006439 8.6e-204 713.8 470 74.7
BcaB05g25272 Brassica carinata HOM05D004738 ORTHO05D006439 2.6e-200 702.2 375 91.2
THA.LOC104808210 Tarenaya hassleriana HOM05D004738 ORTHO05D006439 8.3e-199 697.2 459 75.4
THA.LOC104812476 Tarenaya hassleriana HOM05D004738 ORTHO05D006439 4.3e-195 684.9 460 73.5
Thecc.06G081700 Theobroma cacao HOM05D004738 ORTHO05D006439 7.6e-176 620.9 446 68.6
CiPaw.02G152800 Carya illinoinensis HOM05D004738 ORTHO05D006439 3.8e-175 618.6 371 77.6
COL.COLO4_02957 Corchorus olitorius HOM05D004738 ORTHO05D006439 2.3e-172 609.4 365 77.0
Cfa002046 Carpinus fangiana HOM05D004738 ORTHO05D006439 3.0e-172 609.0 449 66.8
Gohir.A02G122900 Gossypium hirsutum HOM05D004738 ORTHO05D006439 8.7e-172 607.4 441 67.3
Haze_16464 Corylus avellana HOM05D004738 ORTHO05D006439 1.5e-171 606.7 471 63.7
Duzib235G1168 Durio zibethinus HOM05D004738 ORTHO05D006439 9.6e-171 604.0 460 65.9
Gorai.002G058000 Gossypium raimondii HOM05D004738 ORTHO05D006439 1.3e-170 603.6 441 67.1
Gohir.D03G073500 Gossypium hirsutum HOM05D004738 ORTHO05D006439 3.7e-170 602.1 441 67.1
Sed0002572 Sechium edule HOM05D004738 ORTHO05D006439 1.4e-169 600.1 436 66.5
MELO3C023371.2 Cucumis melo HOM05D004738 ORTHO05D006439 9.0e-169 597.4 416 68.8
MD17G1198400 Malus domestica HOM05D004738 ORTHO05D006439 1.2e-168 597.0 389 73.5
CsaV3_7G032950 Cucumis sativus L. HOM05D004738 ORTHO05D006439 2.0e-168 596.3 415 69.2
Gohir.A05G127000 Gossypium hirsutum HOM05D004738 ORTHO05D006439 2.6e-168 595.9 384 72.9
CANSAT56G4214 Cannabis sativa HOM05D004738 ORTHO05D006439 1.7e-167 593.2 415 68.0
FAN05G5687 Fragaria x ananassa HOM05D004738 ORTHO05D006439 1.7e-167 593.2 409 70.2
Gorai.009G132100 Gossypium raimondii HOM05D004738 ORTHO05D006439 1.7e-167 593.2 383 72.8
Manes.04G120700 Manihot esculenta HOM05D004738 ORTHO05D006439 1.7e-167 593.2 439 65.8
Prupe.3G075100 Prunus persica HOM05D004738 ORTHO05D006439 1.7e-167 593.2 421 68.2
QL05p025470 Quercus lobata HOM05D004738 ORTHO05D006439 1.7e-167 593.2 383 73.1
VMungo1080G0347 Vigna mungo HOM05D004738 ORTHO05D006439 1.7e-167 593.2 451 66.3
Potri.003G058500 Populus trichocarpa HOM05D004738 ORTHO05D006439 2.2e-167 592.8 434 67.1
FAN02G1331 Fragaria x ananassa HOM05D004738 ORTHO05D006439 1.1e-166 590.5 420 68.8
Ciclev10025569m.g Citrus clementina HOM05D004738 ORTHO05D006439 1.4e-166 590.1 433 65.4
RcHm_v2.0_Chr2g0137281 Rosa chinensis HOM05D004738 ORTHO05D006439 1.4e-166 590.1 398 69.3
FvH4_6g30840 Fragaria vesca HOM05D004738 ORTHO05D006439 1.9e-166 589.7 387 72.6
DCAR_026302 Daucus carota HOM05D004738 ORTHO05D006439 2.4e-166 589.3 437 65.4
Sc12g0009100 Simmondsia chinensis HOM05D004738 ORTHO05D006439 9.3e-166 587.4 379 72.3
TAR383G0518 Trochodendron aralioides HOM05D004738 ORTHO05D006439 1.2e-165 587.0 385 71.4
arahy.Tifrunner.gnm1.ann1.2F1L5Z Arachis hypogaea HOM05D004738 ORTHO05D006439 1.6e-165 586.6 416 70.4
Dinv30535 Davidia involucrata HOM05D004738 ORTHO05D006439 1.6e-165 586.6 414 69.1
Medtr2g102510 Medicago truncatula HOM05D004738 ORTHO05D006439 1.6e-165 586.6 420 68.1
CSS0005409 Camellia sinensis var. sinensis HOM05D004738 ORTHO05D006439 3.5e-165 585.5 392 72.4
Eucgr.F02574 Eucalyptus grandis HOM05D004738 ORTHO05D006439 3.5e-165 585.5 385 71.2
Sabra03G0032700 Salix brachista HOM05D004738 ORTHO05D006439 3.5e-165 585.5 381 72.2
Glyma.15G012500 Glycine max HOM05D004738 ORTHO05D006439 6.0e-165 584.7 410 70.0
Cpa.g.sc10.174 Carica papaya HOM05D004738 ORTHO05D006439 7.9e-165 584.3 348 77.0
Nn8g39296 Nelumbo nucifera HOM05D004738 ORTHO05D006439 8.7e-164 580.9 418 68.2
Rhsim12G0195800 Rhododendron simsii HOM05D004738 ORTHO05D006439 1.1e-163 580.5 434 66.4
SGA_v2.0_scaffold37G14802 Striga asiatica HOM05D004738 ORTHO05D006439 1.1e-163 580.5 383 70.8
GSVIVG01017163001 Vitis vinifera HOM05D004738 ORTHO05D006439 1.1e-163 580.5 381 72.7
FAN09G3531 Fragaria x ananassa HOM05D004738 ORTHO05D006439 1.5e-163 580.1 389 71.7
Aqoxy7G03780 Aquilegia oxysepala HOM05D004738 ORTHO05D006439 3.3e-163 578.9 417 66.9
ECA247G3808 Erigeron canadensis HOM05D004738 ORTHO05D006439 7.4e-163 577.8 375 72.3
Nn2g11846 Nelumbo nucifera HOM05D004738 ORTHO05D006439 9.6e-163 577.4 421 67.7
FAN14G4632 Fragaria x ananassa HOM05D004738 ORTHO05D006439 1.3e-162 577.0 421 67.7
TPR.G37250 Trifolium pratense HOM05D004738 ORTHO05D006439 1.3e-162 577.0 381 71.1
TWI12G0818 Tripterygium wilfordii HOM05D004738 ORTHO05D006439 1.3e-162 577.0 439 64.5
vmacro16939 Vaccinium macrocarpon HOM05D004738 ORTHO05D006439 1.3e-162 577.0 377 72.7
arahy.Tifrunner.gnm1.ann1.S5ELWT Arachis hypogaea HOM05D004738 ORTHO05D006439 2.8e-162 575.9 392 71.7
Lalb_Chr22g0351141 Lupinus albus HOM05D004738 ORTHO05D006439 2.8e-162 575.9 375 72.5
Lsat_1_v5_gn_1_34140 Lactuca sativa HOM05D004738 ORTHO05D006439 3.7e-162 575.5 402 68.9
Oeu022417.1 Olea europaea HOM05D004738 ORTHO05D006439 3.7e-162 575.5 383 70.5
Peaxi162Scf00015g00234 Petunia axillaris HOM05D004738 ORTHO05D006439 6.2e-162 574.7 377 72.1
Ca_01103_v3 Cicer arietinum L. HOM05D004738 ORTHO05D006439 1.1e-161 573.9 408 68.4
HanXRQChr02g0032631 Helianthus annuus HOM05D004738 ORTHO05D006439 1.1e-161 573.9 378 72.0
Actinidia08828 Actinidia chinensis HOM05D004738 ORTHO05D006439 1.4e-161 573.5 420 66.7
Glyma.13G361400 Glycine max HOM05D004738 ORTHO05D006439 2.4e-161 572.8 451 65.0
Sopen00g008920 Solanum pennellii HOM05D004738 ORTHO05D006439 2.4e-161 572.8 450 63.1
Sopen03g039310 Solanum pennellii HOM05D004738 ORTHO05D006439 2.4e-161 572.8 450 63.1
Cc04_g03640 Coffea canephora HOM05D004738 ORTHO05D006439 3.1e-161 572.4 374 71.4
Nitab4.5_0005784g0040 Nicotiana tabacum HOM05D004738 ORTHO05D006439 5.3e-161 571.6 461 62.7
Solyc03g120430.3 Solanum lycopersicum HOM05D004738 ORTHO05D006439 9.0e-161 570.9 463 61.1
MSTRG.11096 Avicennia marina HOM05D004738 ORTHO05D006439 1.2e-160 570.5 387 68.5
Migut.I00837 Erythranthe guttata HOM05D004738 ORTHO05D006439 1.5e-160 570.1 456 61.6
Phvul.005G173200 Phaseolus vulgaris HOM05D004738 ORTHO05D006439 5.8e-160 568.2 410 67.1
Potri.001G177300 Populus trichocarpa HOM05D004738 ORTHO05D006439 5.8e-160 568.2 391 69.8
PGSC0003DMG400002559 Solanum tuberosum HOM05D004738 ORTHO05D006439 2.2e-159 566.2 457 63.0
AUR62016418 Chenopodium quinoa HOM05D004738 ORTHO05D006439 2.9e-159 565.8 386 71.5
PSO210G3793 Papaver somniferum HOM05D004738 ORTHO05D006439 2.9e-159 565.8 460 61.3
Lalb_Chr14g0373571 Lupinus albus HOM05D004738 ORTHO05D006439 4.9e-159 565.1 390 69.0
Lj3g0001201 Lotus japonicus HOM05D004738 ORTHO05D006439 8.4e-159 564.3 377 71.1
AUR62011604 Chenopodium quinoa HOM05D004738 ORTHO05D006439 1.4e-158 563.5 375 73.1
HanXRQChr04g0096441 Helianthus annuus HOM05D004738 ORTHO05D006439 9.3e-158 560.8 375 70.1
Lj9A505T66 Lonicera japonica HOM05D004738 ORTHO05D006439 1.2e-157 560.5 373 71.6
Nitab4.5_0002424g0040 Nicotiana tabacum HOM05D004738 ORTHO05D006439 1.2e-157 560.5 482 59.5
Lj3g0008822 Lotus japonicus HOM05D004738 ORTHO05D006439 3.5e-157 558.9 410 65.9
CAN.G438.45 Capsicum annuum HOM05D004738 ORTHO05D006439 6.0e-157 558.1 429 63.6
PSO210G6241 Papaver somniferum HOM05D004738 ORTHO05D006439 3.9e-156 555.4 380 68.2
Ah.01g021090 Amaranthus hybridus HOM05D004738 ORTHO05D006439 5.7e-155 551.6 344 76.7
Hund06597 Selenicereus undatus HOM05D004738 ORTHO05D006439 5.7e-155 551.6 378 68.5
MBI01_g13569_MAGBIO Magnolia biondii HOM05D004738 ORTHO05D006439 2.8e-154 549.3 392 67.1
PGR102G2550 Punica granatum HOM05D004738 ORTHO05D006439 2.8e-154 549.3 402 64.9
ClCG09G002360 Citrullus lanatus HOM05D004738 ORTHO05D006439 6.9e-153 544.7 368 69.6
EL10Ac9g21974 Beta vulgaris HOM05D004738 ORTHO05D006439 3.4e-152 542.3 390 68.7
AT1G80380 Arabidopsis thaliana HOM05D004738 ORTHO05D006439 5.9e-152 541.6 301 85.7
Duzib192G0909 Durio zibethinus HOM05D004738 ORTHO05D006439 5.9e-152 541.6 341 74.2
Gohir.D05G127900 Gossypium hirsutum HOM05D004738 ORTHO05D006439 1.3e-151 540.4 317 78.5
CDE06G1313 Ceratophyllum demersum HOM05D004738 ORTHO05D006439 2.5e-150 536.2 413 63.4
Os01g0682500 Oryza sativa ssp. japonica HOM05D004738 ORTHO05D006439 1.2e-149 533.9 335 72.5
Zm00001eb267390 Zea mays HOM05D004738 ORTHO05D006439 1.4e-145 520.4 335 69.9
CSS0037007 Camellia sinensis var. sinensis HOM05D004738 ORTHO05D006439 1.4e-142 510.4 364 68.1
Zm00001eb156570 Zea mays HOM05D004738 ORTHO05D006439 7.4e-139 498.0 351 67.0
ATR0083G024 Amborella trichopoda HOM05D004738 ORTHO05D006439 2.6e-136 489.6 374 61.8
BcaC03g15976 Brassica carinata HOM05D004738 ORTHO05D006439 6.7e-132 474.9 247 92.7
Nn2g11397 Nelumbo nucifera HOM05D004738 ORTHO05D006439 2.2e-130 469.9 346 65.0
Oeu033460.1 Olea europaea HOM05D004738 ORTHO05D006439 1.2e-128 464.2 330 67.0
unitig_21.g20511 Utricularia gibba HOM05D004738 ORTHO05D006439 1.3e-127 460.7 408 57.8
Pp3c18_16070 Physcomitrium patens HOM05D004738 ORTHO05D006439 6.1e-125 451.8 330 60.9
HPP92_011481 Vanilla planifolia HOM05D004738 ORTHO05D006439 1.5e-123 447.2 336 64.6
SEGI_20298 Sequoiadendron giganteum HOM05D004738 ORTHO05D006439 7.0e-121 438.3 368 56.5
SHI09688 Sapria himalayana HOM05D004738 ORTHO05D006439 1.7e-119 433.7 353 59.8
SMO147G0425 Selaginella moellendorffii HOM05D004738 ORTHO05D006439 1.7e-114 417.2 336 56.5
HPP92_011544 Vanilla planifolia HOM05D004738 ORTHO05D006439 7.0e-113 411.8 304 64.5
Psat5g299520 Pisum sativum HOM05D004738 ORTHO05D006439 1.2e-112 411.0 273 70.7
AagrBONN_evm.TU.Sc2ySwM_368.190 Anthoceros agrestis HOM05D004738 ORTHO05D006439 3.5e-112 409.5 334 55.4
Mapoly0010s0209 Marchantia polymorpha HOM05D004738 ORTHO05D006439 1.2e-109 401.0 351 52.4
CBR_g49861 Chara braunii HOM05D004738 ORTHO05D006439 4.4e-107 392.5 363 51.2
arahy.Tifrunner.gnm1.ann1.7R7SHJ Arachis hypogaea HOM05D004738 ORTHO05D006439 2.5e-86 323.6 282 60.3
Cre12.g542300 Chlamydomonas reinhardtii HOM05D004738 ORTHO05D006439 3.3e-86 323.2 343 45.5
MCO11G539 Micromonas commoda HOM05D004738 ORTHO05D006439 5.8e-83 312.4 337 45.1
arahy.Tifrunner.gnm1.ann1.1FY4ZR Arachis hypogaea HOM05D004738 ORTHO05D007023 1.6e-80 304.3 277 58.5
PRCOL_00005044 Prasinoderma coloniale HOM05D004738 ORTHO05D006439 9.5e-78 295.0 326 46.3
Dinv38066 Davidia involucrata HOM05D004738 ORTHO05D006439 1.6e-61 241.1 145 80.0
Hund00584 Selenicereus undatus HOM05D004738 ORTHO05D006439 4.8e-53 213.0 136 72.1
arahy.Tifrunner.gnm1.ann1.CI84PE Arachis hypogaea HOM05D004738 ORTHO05D006439 1.1e-52 211.8 279 48.0
TAR636G0147 Trochodendron aralioides HOM05D004738 ORTHO05D051490 5.7e-38 162.9 162 45.7
TAR636G3653 Trochodendron aralioides HOM05D004738 ORTHO05D051490 2.8e-37 160.6 162 45.1
Nn4g26563 Nelumbo nucifera HOM05D004738 ORTHO05D006439 2.5e-33 147.5 243 39.1
arahy.Tifrunner.gnm1.ann1.9N81UM Arachis hypogaea HOM05D005815 ORTHO05D007023 1.8e-31 141.4 284 32.4
Ah.09g223940 Amaranthus hybridus HOM05D004738 ORTHO05D001643 2.5e-30 137.5 93 73.1
Dinv38065 Davidia involucrata HOM05D004738 ORTHO05D006439 5.3e-28 129.8 79 74.7
Sabra01G0149000 Salix brachista HOM05D004738 ORTHO05D006439 5.7e-22 109.8 70 64.3
arahy.Tifrunner.gnm1.ann1.GN5QKJ Arachis hypogaea HOM05D005815 ORTHO05D007023 9.1e-20 102.4 64 71.9
Nn1g05393 Nelumbo nucifera HOM05D004738 ORTHO05D280673 7.4e-14 82.8 82 46.3
Pp3c21_6430 Physcomitrium patens HOM05D004738 ORTHO05D314778 5.5e-09 66.6 52 46.2


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