Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g08436 Brassica carinata HOM05D006484 ORTHO05D008002 1.7e-149 532.7 286 100.0
BcaC02g09737 Brassica carinata HOM05D006484 ORTHO05D008002 1.1e-143 513.5 285 95.1
C04p37040 Brassica napus HOM05D006484 ORTHO05D008002 1.1e-143 513.5 285 95.1
BolC4t25282H Brassica oleracea HOM05D006484 ORTHO05D008002 1.1e-143 513.5 285 95.1
A04p04700 Brassica napus HOM05D006484 ORTHO05D008002 1.5e-140 503.1 280 94.6
BraA04t16182Z Brassica rapa HOM05D006484 ORTHO05D008002 1.5e-140 503.1 280 94.6
Sp5g07210 Schrenkiella parvula HOM05D006484 ORTHO05D008002 2.4e-135 485.7 289 90.7
BraA09t40274Z Brassica rapa HOM05D006484 ORTHO05D008002 6.5e-133 477.6 286 89.2
A09p48180 Brassica napus HOM05D006484 ORTHO05D008002 8.5e-133 477.2 286 89.5
AL5G36370 Arabidopsis lyrata HOM05D006484 ORTHO05D008002 3.2e-132 475.3 285 89.5
C08p30440 Brassica napus HOM05D006484 ORTHO05D008002 3.2e-132 475.3 290 88.6
BolC8t50667H Brassica oleracea HOM05D006484 ORTHO05D008002 1.6e-131 473.0 290 88.3
Thhalv10010599m.g Eutrema salsugineum HOM05D006484 ORTHO05D008002 2.1e-131 472.6 287 90.9
CARHR165250 Cardamine hirsuta HOM05D006484 ORTHO05D008002 6.1e-131 471.1 288 88.2
BcaC07g39842 Brassica carinata HOM05D006484 ORTHO05D008002 1.0e-130 470.3 284 89.4
AT3G55250 Arabidopsis thaliana HOM05D006484 ORTHO05D008002 1.3e-128 463.4 287 86.8
Carub.0005s2191 Capsella rubella HOM05D006484 ORTHO05D008002 5.0e-125 451.4 285 87.0
Aa31LG10G9850 Aethionema arabicum HOM05D006484 ORTHO05D008002 1.5e-116 423.3 302 75.2
THA.LOC104805398 Tarenaya hassleriana HOM05D006484 ORTHO05D008002 3.7e-112 408.7 285 75.1
BcaB01g00117 Brassica carinata HOM05D006484 ORTHO05D008002 1.2e-107 393.7 286 80.1
Duzib147G0204 Durio zibethinus HOM05D006484 ORTHO05D008002 3.2e-95 352.4 270 67.4
TWI56G0797 Tripterygium wilfordii HOM05D006484 ORTHO05D008002 2.1e-94 349.7 292 64.0
COL.COLO4_28946 Corchorus olitorius HOM05D006484 ORTHO05D008002 6.0e-94 348.2 270 66.3
Hund05806 Selenicereus undatus HOM05D006484 ORTHO05D008002 7.8e-94 347.8 235 74.9
Thecc.04G008700 Theobroma cacao HOM05D006484 ORTHO05D008002 5.1e-93 345.1 280 63.9
CANSAT64G2071 Cannabis sativa HOM05D006484 ORTHO05D008002 6.6e-93 344.7 292 63.4
Haze_14667 Corylus avellana HOM05D006484 ORTHO05D008002 1.5e-92 343.6 283 62.5
Gohir.D11G071200 Gossypium hirsutum HOM05D006484 ORTHO05D008002 1.5e-92 343.6 280 63.6
Gorai.007G076500 Gossypium raimondii HOM05D006484 ORTHO05D008002 1.5e-92 343.6 280 63.6
Manes.17G122200 Manihot esculenta HOM05D006484 ORTHO05D008002 1.9e-92 343.2 273 64.8
Ciclev10016148m.g Citrus clementina HOM05D006484 ORTHO05D008002 5.6e-92 341.7 275 64.0
MD17G1035000 Malus domestica HOM05D006484 ORTHO05D008002 5.6e-92 341.7 275 64.0
PGR142G1659 Punica granatum HOM05D006484 ORTHO05D008002 7.3e-92 341.3 277 67.5
Cfa007430 Carpinus fangiana HOM05D006484 ORTHO05D008002 1.6e-91 340.1 232 70.3
CiPaw.03G037700 Carya illinoinensis HOM05D006484 ORTHO05D008002 2.1e-91 339.7 292 62.0
Gohir.A11G067300 Gossypium hirsutum HOM05D006484 ORTHO05D008002 2.8e-91 339.3 280 62.9
Prupe.3G283800 Prunus persica HOM05D006484 ORTHO05D008002 1.1e-90 337.4 231 70.6
arahy.Tifrunner.gnm1.ann1.J6NIZK Arachis hypogaea HOM05D006484 ORTHO05D008002 1.2e-89 334.0 234 70.5
arahy.Tifrunner.gnm1.ann1.ND36BV Arachis hypogaea HOM05D006484 ORTHO05D008002 1.2e-89 334.0 234 70.5
FAN14G3872 Fragaria x ananassa HOM05D006484 ORTHO05D008002 1.2e-89 334.0 279 63.1
MBI16_g26453_MAGBIO Magnolia biondii HOM05D006484 ORTHO05D008002 1.2e-89 334.0 277 62.5
Hma1.2p1_0802F.1_g220370 Hydrangea macrophylla HOM05D006484 ORTHO05D008002 1.5e-89 333.6 233 70.0
RcHm_v2.0_Chr2g0171411 Rosa chinensis HOM05D006484 ORTHO05D008002 2.0e-89 333.2 279 63.4
FAN02G1518 Fragaria x ananassa HOM05D006484 ORTHO05D008002 2.6e-89 332.8 231 71.0
FvH4_6g50620 Fragaria vesca HOM05D006484 ORTHO05D008002 3.4e-89 332.4 279 63.1
QL02p076682 Quercus lobata HOM05D006484 ORTHO05D008002 3.4e-89 332.4 256 65.2
Dinv33496 Davidia involucrata HOM05D006484 ORTHO05D008002 7.6e-89 331.3 232 69.0
Nitab4.5_0003337g0080 Nicotiana tabacum HOM05D006484 ORTHO05D008002 7.6e-89 331.3 279 60.9
Nitab4.5_0005176g0030 Nicotiana tabacum HOM05D006484 ORTHO05D008002 1.3e-88 330.5 278 61.2
Aqoxy3G01007 Aquilegia oxysepala HOM05D006484 ORTHO05D008002 1.7e-88 330.1 234 69.7
SalBow7G4444 Salvia bowleyana HOM05D006484 ORTHO05D008002 1.7e-88 330.1 283 61.1
GSVIVG01032484001 Vitis vinifera HOM05D006484 ORTHO05D008002 1.7e-88 330.1 228 71.1
MELO3C009955.2 Cucumis melo HOM05D006484 ORTHO05D008002 2.2e-88 329.7 281 61.6
Potri.017G073000 Populus trichocarpa HOM05D006484 ORTHO05D008002 2.2e-88 329.7 234 67.5
Rhsim08G0055200 Rhododendron simsii HOM05D006484 ORTHO05D008002 3.8e-88 328.9 288 59.4
TAR629G1796 Trochodendron aralioides HOM05D006484 ORTHO05D008002 8.4e-88 327.8 234 70.5
CsaV3_3G042410 Cucumis sativus L. HOM05D006484 ORTHO05D008002 1.4e-87 327.0 282 59.6
Migut.K01368 Erythranthe guttata HOM05D006484 ORTHO05D008002 1.9e-87 326.6 237 66.7
Sabra16G0230700 Salix brachista HOM05D006484 ORTHO05D008002 1.9e-87 326.6 233 68.2
CSS0043741 Camellia sinensis var. sinensis HOM05D006484 ORTHO05D008002 2.4e-87 326.2 283 59.4
SGA_v2.0_scaffold30G12470 Striga asiatica HOM05D006484 ORTHO05D008002 3.2e-87 325.9 254 64.6
Peaxi162Scf00129g00106 Petunia axillaris HOM05D006484 ORTHO05D008002 7.1e-87 324.7 242 66.1
Sed0007993 Sechium edule HOM05D006484 ORTHO05D008002 7.1e-87 324.7 268 63.1
MSTRG.15510 Avicennia marina HOM05D006484 ORTHO05D008002 9.3e-87 324.3 235 68.5
ClCG10G014230 Citrullus lanatus HOM05D006484 ORTHO05D008002 9.3e-87 324.3 281 60.5
Lsat_1_v5_gn_0_26201 Lactuca sativa HOM05D006484 ORTHO05D008002 1.6e-86 323.6 251 64.9
Sopen02g031660 Solanum pennellii HOM05D006484 ORTHO05D008002 2.1e-86 323.2 277 61.7
Cc07_g02300 Coffea canephora HOM05D006484 ORTHO05D008002 2.7e-86 322.8 228 69.7
FAN09G0334 Fragaria x ananassa HOM05D006484 ORTHO05D008002 2.7e-86 322.8 287 60.6
Solyc02g086890.3 Solanum lycopersicum HOM05D006484 ORTHO05D008002 7.8e-86 321.2 242 67.4
Lj7A591T78 Lonicera japonica HOM05D006484 ORTHO05D008002 1.7e-85 320.1 234 67.9
PGSC0003DMG401000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 1.7e-85 320.1 231 68.4
PGSC0003DMG402000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 1.7e-85 320.1 231 68.4
unitig_88.g27777 Utricularia gibba HOM05D000190 ORTHO05D000113 1.7e-85 320.1 262 60.3
FAN05G1767 Fragaria x ananassa HOM05D006484 ORTHO05D008002 8.7e-85 317.8 299 58.2
Glyma.13G169000 Glycine max HOM05D006484 ORTHO05D008002 8.7e-85 317.8 286 57.0
Glyma.19G009200 Glycine max HOM05D006484 ORTHO05D008002 8.7e-85 317.8 233 65.2
HanXRQChr15g0474541 Helianthus annuus HOM05D006484 ORTHO05D008002 8.7e-85 317.8 232 67.7
Lalb_Chr21g0319431 Lupinus albus HOM05D006484 ORTHO05D008002 1.5e-84 317.0 234 65.8
EL10Ac6g14629 Beta vulgaris HOM05D006484 ORTHO05D008002 1.9e-84 316.6 285 58.9
Eucgr.I01814 Eucalyptus grandis HOM05D006484 ORTHO05D008002 2.5e-84 316.2 267 61.4
VMungo0464G2075 Vigna mungo HOM05D006484 ORTHO05D008002 6.2e-83 311.6 233 64.8
Lj2g0018435 Lotus japonicus HOM05D006484 ORTHO05D008002 4.0e-82 308.9 233 65.2
ECA246G1918 Erigeron canadensis HOM05D006484 ORTHO05D008002 5.3e-82 308.5 230 65.7
Ca_04198_v3 Cicer arietinum L. HOM05D006484 ORTHO05D008002 1.2e-81 307.4 233 66.1
Phvul.004G016700 Phaseolus vulgaris HOM05D006484 ORTHO05D008002 2.0e-81 306.6 233 63.9
TPR.G2295 Trifolium pratense HOM05D006484 ORTHO05D008002 4.4e-81 305.4 233 64.4
PSO832G1464 Papaver somniferum HOM05D006484 ORTHO05D008002 5.8e-81 305.1 235 66.0
PSO063G6163 Papaver somniferum HOM05D006484 ORTHO05D008002 1.7e-80 303.5 235 65.1
Ah.02g127510 Amaranthus hybridus HOM05D006484 ORTHO05D008002 8.4e-80 301.2 220 69.5
Sc10g0003790 Simmondsia chinensis HOM05D006484 ORTHO05D008002 1.4e-79 300.4 240 62.9
Psat1g058640 Pisum sativum HOM05D006484 ORTHO05D008002 4.2e-79 298.9 228 65.4
Medtr6g007180 Medicago truncatula HOM05D006484 ORTHO05D008002 3.5e-78 295.8 237 62.0
ATR0730G086 Amborella trichopoda HOM05D006484 ORTHO05D008002 8.1e-75 284.6 228 61.8
CDE05G1394 Ceratophyllum demersum HOM05D001719 ORTHO05D008883 2.0e-73 280.0 218 62.4
DCAR_021681 Daucus carota HOM05D006484 ORTHO05D008002 4.5e-73 278.9 269 54.6
BolC3t16636H Brassica oleracea HOM05D006484 ORTHO05D008002 1.7e-72 276.9 182 82.4
Os05g0526200 Oryza sativa ssp. japonica HOM05D006484 ORTHO05D008002 4.2e-71 272.3 237 58.6
Nn4g22800 Nelumbo nucifera HOM05D006484 ORTHO05D008002 1.6e-70 270.4 232 59.9
BolC7t43763H Brassica oleracea HOM05D006484 ORTHO05D008002 4.3e-68 262.3 204 72.1
HPP92_024318 Vanilla planifolia HOM05D006484 ORTHO05D008002 9.0e-66 254.6 243 56.0
Actinidia35740 Actinidia chinensis HOM05D006484 ORTHO05D008002 3.5e-62 242.7 229 54.1
AUR62007841 Chenopodium quinoa HOM05D006484 ORTHO05D008002 3.4e-57 226.1 283 49.1
Cpa.g.sc39.92 Carica papaya HOM05D006484 ORTHO05D008002 7.6e-57 224.9 172 68.6
vmacro18241 Vaccinium macrocarpon HOM05D006484 ORTHO05D008002 7.9e-54 214.9 288 46.5
Pp3c21_1380 Physcomitrium patens HOM05D006484 ORTHO05D008002 1.6e-46 190.7 208 46.6
AagrBONN_evm.TU.Sc2ySwM_344.2636 Anthoceros agrestis HOM05D006484 ORTHO05D008002 3.0e-45 186.4 209 44.0
Zm00001eb215070 Zea mays HOM05D006484 ORTHO05D008002 7.4e-44 181.8 141 59.6
AUR62003035 Chenopodium quinoa HOM05D006484 ORTHO05D008002 1.7e-43 180.6 205 50.7
Mapoly0095s0016 Marchantia polymorpha HOM05D006484 ORTHO05D008002 1.7e-43 180.6 221 43.0
SMO165G0092 Selaginella moellendorffii HOM05D006484 ORTHO05D008002 1.5e-41 174.1 198 46.5
BcaC06g34142 Brassica carinata HOM05D006484 ORTHO05D008002 3.2e-39 166.4 146 65.8
CBR_g163 Chara braunii HOM05D006484 ORTHO05D008002 1.8e-37 160.6 233 40.8
HPP92_024280 Vanilla planifolia HOM05D006484 ORTHO05D008002 3.0e-37 159.8 133 59.4
Atru.chr6.2293 Acer truncatum HOM05D006484 ORTHO05D008002 3.8e-32 142.9 87 73.6
CAN.G473.120 Capsicum annuum HOM05D006484 ORTHO05D008002 1.1e-31 141.4 148 54.1
CAN.G685.18 Capsicum annuum HOM05D006484 ORTHO05D008002 7.5e-28 128.6 91 69.2
MD09G1034600 Malus domestica HOM05D006484 ORTHO05D000001 1.5e-23 114.4 98 62.2
Atru.chr6.2294 Acer truncatum HOM05D006484 ORTHO05D008002 3.0e-21 106.7 84 66.7
arahy.Tifrunner.gnm1.ann1.QWBN9A Arachis hypogaea HOM05D006484 ORTHO05D008002 1.3e-16 91.3 59 71.2
TPR.G33278 Trifolium pratense HOM05D006484 ORTHO05D008002 7.5e-12 75.5 51 64.7
Cre03.g183400 Chlamydomonas reinhardtii HOM05D006484 ORTHO05D008002 2.2e-11 73.9 192 26.6
MD09G1034700 Malus domestica HOM05D006484 ORTHO05D008002 9.2e-10 68.6 87 48.3
arahy.Tifrunner.gnm1.ann1.5V94PQ Arachis hypogaea HOM05D005791 ORTHO05D008002 4.3e-07 59.7 34 79.4


User provided reference genes

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