Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g08416 Brassica carinata HOM05D006096 ORTHO05D007775 1.2e-49 199.5 100 100.0
BcaC04g19312 Brassica carinata HOM05D006096 ORTHO05D007775 4.8e-30 134.4 79 84.8
A10p27260 Brassica napus HOM05D006096 ORTHO05D007775 4.8e-30 134.4 79 84.8
C09p67070 Brassica napus HOM05D006096 ORTHO05D007775 4.8e-30 134.4 79 84.8
BolC9t59480H Brassica oleracea HOM05D006096 ORTHO05D007775 4.8e-30 134.4 79 84.8
BraA10t44776Z Brassica rapa HOM05D006096 ORTHO05D007775 4.8e-30 134.4 79 84.8
BcaB08g37116 Brassica carinata HOM05D006096 ORTHO05D007775 6.2e-30 134.0 79 84.8
BcaC04g19315 Brassica carinata HOM05D006096 ORTHO05D007775 6.2e-30 134.0 79 84.8
AT5G10320 Arabidopsis thaliana HOM05D006096 ORTHO05D007775 4.0e-29 131.3 78 82.1
Sp6g33110 Schrenkiella parvula HOM05D006096 ORTHO05D007775 1.5e-28 129.4 79 79.7
AL6G20820 Arabidopsis lyrata HOM05D006096 ORTHO05D007775 1.3e-27 126.3 79 78.5
CARHR202960 Cardamine hirsuta HOM05D006096 ORTHO05D007775 2.9e-27 125.2 79 75.9
Aa31LG3G16830 Aethionema arabicum HOM05D006096 ORTHO05D007775 8.4e-27 123.6 79 74.7
FvH4_1g20510 Fragaria vesca HOM05D006096 ORTHO05D007775 2.4e-26 122.1 79 77.2
FAN19G2919 Fragaria x ananassa HOM05D006096 ORTHO05D007775 2.4e-26 122.1 79 77.2
RcHm_v2.0_Chr2g0112761 Rosa chinensis HOM05D006096 ORTHO05D007775 4.2e-26 121.3 79 77.2
Dinv08841 Davidia involucrata HOM05D006096 ORTHO05D007775 7.1e-26 120.6 88 70.5
TPR.G15994 Trifolium pratense HOM05D006096 ORTHO05D007775 1.6e-25 119.4 88 65.9
MD01G1033500 Malus domestica HOM05D006096 ORTHO05D007775 4.6e-25 117.9 79 73.4
CARHR202970 Cardamine hirsuta HOM05D006096 ORTHO05D007775 6.0e-25 117.5 79 73.4
Psat5g090600 Pisum sativum HOM05D006096 ORTHO05D007775 6.0e-25 117.5 88 67.0
Lj6g0005810 Lotus japonicus HOM05D006096 ORTHO05D007775 7.8e-25 117.1 80 71.2
Medtr3g087010 Medicago truncatula HOM05D006096 ORTHO05D007775 7.8e-25 117.1 88 65.9
Ca_16518_v3 Cicer arietinum L. HOM05D006096 ORTHO05D007775 1.0e-24 116.7 88 64.8
SGA_v2.0_scaffold111G31503 Striga asiatica HOM05D006096 ORTHO05D007775 1.3e-24 116.3 88 64.8
TWI53G1189 Tripterygium wilfordii HOM05D006096 ORTHO05D007775 1.7e-24 115.9 88 65.9
MBI02_g02177_MAGBIO Magnolia biondii HOM05D006096 ORTHO05D007775 2.3e-24 115.5 88 64.8
Cfa002624 Carpinus fangiana HOM05D006096 ORTHO05D007775 3.0e-24 115.2 96 63.5
Aqoxy6G00746 Aquilegia oxysepala HOM05D006096 ORTHO05D007775 3.9e-24 114.8 88 62.5
Cpa.g.sc55.89 Carica papaya HOM05D006096 ORTHO05D007775 3.9e-24 114.8 88 64.8
Manes.13G095500 Manihot esculenta HOM05D006096 ORTHO05D007775 3.9e-24 114.8 90 63.3
Nn1g05418 Nelumbo nucifera HOM05D006096 ORTHO05D007775 3.9e-24 114.8 88 63.6
SalBow3G4176 Salvia bowleyana HOM05D006096 ORTHO05D007775 3.9e-24 114.8 89 65.2
Potri.005G073600 Populus trichocarpa HOM05D006096 ORTHO05D007775 5.1e-24 114.4 88 63.6
QL06p048506 Quercus lobata HOM05D006096 ORTHO05D007775 5.1e-24 114.4 90 63.3
Sabra05G0060100 Salix brachista HOM05D006096 ORTHO05D007775 6.6e-24 114.0 88 63.6
Glyma.11G241200 Glycine max HOM05D006096 ORTHO05D007775 8.7e-24 113.6 88 65.9
Sopen11g004830 Solanum pennellii HOM05D006096 ORTHO05D007775 8.7e-24 113.6 93 62.4
PGSC0003DMG400016160 Solanum tuberosum HOM05D006096 ORTHO05D007775 8.7e-24 113.6 93 62.4
TAR625G1553 Trochodendron aralioides HOM05D006096 ORTHO05D007775 8.7e-24 113.6 88 64.8
CiPaw.03G143900 Carya illinoinensis HOM05D006096 ORTHO05D007775 1.1e-23 113.2 79 72.2
Glyma.18G015800 Glycine max HOM05D006096 ORTHO05D007775 1.1e-23 113.2 88 64.8
Solyc11g009060.2 Solanum lycopersicum HOM05D006096 ORTHO05D007775 1.1e-23 113.2 93 62.4
arahy.Tifrunner.gnm1.ann1.DD3ZZY Arachis hypogaea HOM05D006096 ORTHO05D007775 1.5e-23 112.8 88 65.9
Prupe.6G191000 Prunus persica HOM05D006096 ORTHO05D007775 1.5e-23 112.8 79 72.2
arahy.Tifrunner.gnm1.ann1.C4UPUA Arachis hypogaea HOM05D006096 ORTHO05D007775 1.9e-23 112.5 77 72.7
COL.COLO4_27275 Corchorus olitorius HOM05D006096 ORTHO05D007775 1.9e-23 112.5 90 64.4
Eucgr.H04751 Eucalyptus grandis HOM05D006096 ORTHO05D007775 1.9e-23 112.5 93 60.2
Gohir.D10G103900 Gossypium hirsutum HOM05D006096 ORTHO05D007775 1.9e-23 112.5 93 61.3
Gorai.011G113400 Gossypium raimondii HOM05D006096 ORTHO05D007775 1.9e-23 112.5 93 61.3
Lsat_1_v5_gn_5_34320 Lactuca sativa HOM05D006096 ORTHO05D007775 1.9e-23 112.5 80 68.8
Os04g0451100 Oryza sativa ssp. japonica HOM05D006096 ORTHO05D007775 2.5e-23 112.1 91 59.3
vmacro18587 Vaccinium macrocarpon HOM05D006096 ORTHO05D007775 2.5e-23 112.1 88 64.8
CSS0046442 Camellia sinensis var. sinensis HOM05D006096 ORTHO05D007775 3.3e-23 111.7 88 63.6
Phvul.001G253200 Phaseolus vulgaris HOM05D006096 ORTHO05D007775 3.3e-23 111.7 88 63.6
Sed0027583 Sechium edule HOM05D006096 ORTHO05D007775 3.3e-23 111.7 88 63.6
QL06p048476 Quercus lobata HOM05D006096 ORTHO05D007775 4.3e-23 111.3 88 64.8
Migut.H02345 Erythranthe guttata HOM05D006096 ORTHO05D007775 5.6e-23 110.9 88 62.5
PSO210G0897 Papaver somniferum HOM05D006096 ORTHO05D007775 7.3e-23 110.5 88 62.5
Thecc.01G097900 Theobroma cacao HOM05D006096 ORTHO05D007775 7.3e-23 110.5 88 64.8
VMungo1383G2853 Vigna mungo HOM05D006096 ORTHO05D007775 7.3e-23 110.5 88 62.5
Sc16g0000180 Simmondsia chinensis HOM05D006096 ORTHO05D007775 9.6e-23 110.2 91 61.5
Gohir.A10G085100 Gossypium hirsutum HOM05D006096 ORTHO05D007775 1.3e-22 109.8 92 59.8
HPP92_011214 Vanilla planifolia HOM05D006096 ORTHO05D007775 1.3e-22 109.8 91 63.7
Duzib187G1253 Durio zibethinus HOM05D006096 ORTHO05D007775 2.1e-22 109.0 79 68.4
Nitab4.5_0004570g0020 Nicotiana tabacum HOM05D006096 ORTHO05D007775 2.1e-22 109.0 88 62.5
Oeu033049.1 Olea europaea HOM05D006096 ORTHO05D007775 2.8e-22 108.6 88 62.5
CAN.G905.37 Capsicum annuum HOM05D006096 ORTHO05D007775 3.6e-22 108.2 78 67.9
ClCG07G017370 Citrullus lanatus HOM05D006096 ORTHO05D007775 3.6e-22 108.2 81 66.7
Zm00001eb081250 Zea mays HOM05D006096 ORTHO05D007775 3.6e-22 108.2 91 59.3
Ciclev10026196m.g Citrus clementina HOM05D006096 ORTHO05D007775 6.2e-22 107.5 88 61.4
HanXRQChr02g0032011 Helianthus annuus HOM05D006096 ORTHO05D007775 1.1e-21 106.7 95 61.1
Cc07_g14840 Coffea canephora HOM05D006096 ORTHO05D007775 1.4e-21 106.3 93 63.4
CANSAT01G2346 Cannabis sativa HOM05D006096 ORTHO05D007775 1.8e-21 105.9 88 61.4
Rhsim08G0012600 Rhododendron simsii HOM05D006096 ORTHO05D007775 1.8e-21 105.9 87 62.1
Haze_24882 Corylus avellana HOM05D006096 ORTHO05D007775 3.1e-21 105.1 99 58.6
ATR0684G225 Amborella trichopoda HOM05D006096 ORTHO05D007775 4.0e-21 104.8 77 67.5
Atru.chr3.1373 Acer truncatum HOM05D006096 ORTHO05D007775 9.0e-21 103.6 88 60.2
ECA246G2908 Erigeron canadensis HOM05D006096 ORTHO05D007775 9.0e-21 103.6 101 54.5
Peaxi162Scf00381g01013 Petunia axillaris HOM05D006096 ORTHO05D007775 9.0e-21 103.6 86 59.3
Lalb_Chr19g0127391 Lupinus albus HOM05D006096 ORTHO05D007775 1.2e-20 103.2 80 63.8
unitig_899.g14550 Utricularia gibba HOM05D006096 ORTHO05D007775 2.0e-20 102.4 82 64.6
EL10Ac6g15136 Beta vulgaris HOM05D006096 ORTHO05D007775 3.4e-20 101.7 88 59.1
AUR62001986 Chenopodium quinoa HOM05D006096 ORTHO05D007775 1.3e-19 99.8 80 60.0
AUR62003818 Chenopodium quinoa HOM05D006096 ORTHO05D007775 1.7e-19 99.4 80 61.2
Carub.0006s0879 Capsella rubella HOM05D006096 ORTHO05D007775 8.4e-19 97.1 60 76.7
Thhalv10013818m.g Eutrema salsugineum HOM05D006096 ORTHO05D007775 1.1e-18 96.7 71 66.2
CBR_g26374 Chara braunii HOM05D006096 ORTHO05D007775 4.2e-18 94.7 88 59.1
Hund13600 Selenicereus undatus HOM05D006096 ORTHO05D007775 1.6e-17 92.8 127 44.1
AagrBONN_evm.TU.Sc2ySwM_344.1220 Anthoceros agrestis HOM05D006096 ORTHO05D007775 3.5e-17 91.7 81 58.0
Pp3c3_14090 Physcomitrium patens HOM05D006096 ORTHO05D007775 6.0e-17 90.9 90 52.2
Pp3c26_3770 Physcomitrium patens HOM05D006096 ORTHO05D007775 7.9e-17 90.5 91 52.7
Actinidia28854 Actinidia chinensis HOM05D006096 ORTHO05D007775 3.9e-16 88.2 70 67.1
Mapoly0077s0016 Marchantia polymorpha HOM05D006096 ORTHO05D007775 1.5e-15 86.3 88 50.0
SMO301G0024 Selaginella moellendorffii HOM05D006096 ORTHO05D007775 3.3e-15 85.1 84 53.6
CsaV3_4G004600 Cucumis sativus L. HOM05D006096 ORTHO05D007775 5.6e-15 84.3 58 70.7
CsaV3_UNG122970 Cucumis sativus L. HOM05D006096 ORTHO05D007775 5.6e-15 84.3 58 70.7
CsaV3_UNG160190 Cucumis sativus L. HOM05D006096 ORTHO05D007775 5.6e-15 84.3 58 70.7
CBR_g53530 Chara braunii HOM05D006096 ORTHO05D007775 1.3e-14 83.2 91 45.1
MSTRG.23356 Avicennia marina HOM05D006096 ORTHO05D007775 3.7e-14 81.6 60 61.7
DCAR_014211 Daucus carota HOM05D006096 ORTHO05D007775 2.4e-13 79.0 60 61.7
Haze_24873 Corylus avellana HOM05D006096 ORTHO05D007775 3.8e-11 71.6 93 50.5
HanXRQChr15g0477621 Helianthus annuus HOM05D006096 ORTHO05D007775 6.5e-11 70.9 62 58.1
FAN23G0863 Fragaria x ananassa HOM05D006096 ORTHO05D007775 3.9e-08 61.6 79 46.8
PSO447G0355 Papaver somniferum HOM05D006096 ORTHO05D007775 1.3e-06 56.6 88 38.6


User provided reference genes

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