Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g08415 Brassica carinata HOM05D002598 ORTHO05D003130 1.7e-67 259.2 131 100.0
BcaB02g08414 Brassica carinata HOM05D002598 ORTHO05D003130 1.6e-38 162.9 169 56.2
C04p36860 Brassica napus HOM05D002598 ORTHO05D003130 1.4e-37 159.8 123 70.7
BolC8t50702H Brassica oleracea HOM05D002598 ORTHO05D003130 2.8e-30 135.6 164 52.4
BraA04t16155Z Brassica rapa HOM05D002598 ORTHO05D003130 4.8e-30 134.8 146 55.5
BcaB01g00088 Brassica carinata HOM05D002598 ORTHO05D003130 9.0e-29 130.6 194 44.3
Sp5g06970 Schrenkiella parvula HOM05D002598 ORTHO05D003130 2.6e-28 129.0 194 43.8
CARHR165560 Cardamine hirsuta HOM05D002598 ORTHO05D003130 1.9e-26 122.9 160 45.6
BcaC02g09762 Brassica carinata HOM05D002598 ORTHO05D003130 5.5e-26 121.3 158 47.5
A09p48510 Brassica napus HOM05D002598 ORTHO05D003130 1.6e-25 119.8 196 43.9
BraA09t40303Z Brassica rapa HOM05D002598 ORTHO05D003130 1.6e-25 119.8 196 43.9
Carub.0005s2223 Capsella rubella HOM05D002598 ORTHO05D003130 3.9e-24 115.2 201 41.3
AL5G36660 Arabidopsis lyrata HOM05D002598 ORTHO05D003130 6.7e-24 114.4 182 41.8
C08p30800 Brassica napus HOM05D002598 ORTHO05D003130 6.7e-24 114.4 195 43.6
BcaC07g39875 Brassica carinata HOM05D002598 ORTHO05D003130 4.3e-23 111.7 196 43.9
Thhalv10010312m.g Eutrema salsugineum HOM05D002598 ORTHO05D003130 9.6e-23 110.5 117 51.3
Aa31LG10G10530 Aethionema arabicum HOM05D002598 ORTHO05D003130 4.8e-22 108.2 141 46.8
THA.LOC104826737 Tarenaya hassleriana HOM05D002598 ORTHO05D003130 1.0e-19 100.5 135 41.5
AT3G55510 Arabidopsis thaliana HOM05D002598 ORTHO05D003130 1.4e-18 96.7 117 47.0
CARHR163150 Cardamine hirsuta HOM05D002598 ORTHO05D003130 2.7e-17 92.4 142 40.8
Aa31LG10G10540 Aethionema arabicum HOM05D002598 ORTHO05D003130 3.0e-16 89.0 159 39.0
Potri.008G043400 Populus trichocarpa HOM05D002598 ORTHO05D003130 1.9e-07 59.7 128 32.8
TWI15G0990 Tripterygium wilfordii HOM05D002598 ORTHO05D003130 1.3e-06 57.0 137 30.7
Lalb_Chr06g0176371 Lupinus albus HOM05D002598 ORTHO05D003130 3.7e-06 55.5 150 27.3
Manes.10G043700 Manihot esculenta HOM05D002598 ORTHO05D003130 8.2e-06 54.3 132 31.1


User provided reference genes

Program Settings