Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g08346 Brassica carinata HOM05D009749 ORTHO05D008033 6.8e-179 630.6 320 100.0
A04p03560 Brassica napus HOM05D009749 ORTHO05D008033 2.9e-145 518.8 330 82.4
C04p35700 Brassica napus HOM05D009749 ORTHO05D008033 3.7e-145 518.5 330 82.1
BolC4t25234H Brassica oleracea HOM05D009749 ORTHO05D008033 2.4e-144 515.8 339 80.5
BraA04t16080Z Brassica rapa HOM05D009749 ORTHO05D008033 2.9e-137 492.3 334 78.7
Sp5g05780 Schrenkiella parvula HOM05D009749 ORTHO05D008033 5.2e-131 471.5 336 76.5
A09p49630 Brassica napus HOM05D009749 ORTHO05D008033 2.1e-127 459.5 336 75.0
BraA09t40416Z Brassica rapa HOM05D009749 ORTHO05D008033 2.1e-127 459.5 336 75.0
C08p32040 Brassica napus HOM05D009749 ORTHO05D008033 1.0e-126 457.2 336 75.3
BcaC07g39991 Brassica carinata HOM05D009749 ORTHO05D008033 1.7e-126 456.4 336 75.3
BolC8t50822H Brassica oleracea HOM05D009749 ORTHO05D008033 1.7e-126 456.4 336 75.3
CARHR166960 Cardamine hirsuta HOM05D009749 ORTHO05D008033 2.2e-113 412.9 337 69.4
AL5G38190 Arabidopsis lyrata HOM05D009749 ORTHO05D008033 2.9e-113 412.5 340 69.4
AT3G56810 Arabidopsis thaliana HOM05D009749 ORTHO05D008033 2.9e-113 412.5 340 68.5
BcaB02g07636 Brassica carinata HOM05D009749 ORTHO05D008033 7.1e-112 407.9 329 71.4
BolC6t37547H Brassica oleracea HOM05D009749 ORTHO05D008033 7.9e-111 404.4 335 69.6
BcaC08g44807 Brassica carinata HOM05D009749 ORTHO05D008033 5.1e-110 401.7 333 69.7
C06p23780 Brassica napus HOM05D009749 ORTHO05D008033 1.5e-109 400.2 333 69.7
BcaC07g40118 Brassica carinata HOM05D009749 ORTHO05D008033 3.3e-109 399.1 341 69.2
Carub.0005s2354 Capsella rubella HOM05D009749 ORTHO05D008033 1.5e-106 390.2 343 66.8
A07p23080 Brassica napus HOM05D009749 ORTHO05D008033 2.9e-105 386.0 338 66.9
BraA07t29970Z Brassica rapa HOM05D009749 ORTHO05D008033 2.9e-105 386.0 338 66.9
BcaC02g09872 Brassica carinata HOM05D009749 ORTHO05D008033 4.3e-101 372.1 236 81.8
Thhalv10006250m.g Eutrema salsugineum HOM05D009749 ORTHO05D008033 5.9e-58 228.8 177 70.1
THA.LOC104803305 Tarenaya hassleriana HOM05D009749 ORTHO05D008033 2.4e-51 206.8 316 46.2
Thhalv10006450m.g Eutrema salsugineum HOM05D009749 ORTHO05D008033 6.1e-47 192.2 157 71.3
Aa31LG10G11650 Aethionema arabicum HOM05D009749 ORTHO05D008033 3.5e-34 149.8 138 60.9
PGR142G2092 Punica granatum HOM05D007667 ORTHO05D008033 1.1e-14 85.1 275 30.2
Atru.chr8.918 Acer truncatum HOM05D007667 ORTHO05D008033 5.2e-14 82.8 344 27.9
Sabra16G0030500 Salix brachista HOM05D007667 ORTHO05D008033 2.9e-12 77.0 285 28.4
Duzib128G0300 Durio zibethinus HOM05D007667 ORTHO05D008033 3.2e-11 73.6 234 28.2
Ciclev10012153m.g Citrus clementina HOM05D007667 ORTHO05D008033 5.4e-11 72.8 258 29.1
Eucgr.K01702 Eucalyptus grandis HOM05D007667 ORTHO05D008033 1.6e-10 71.2 91 42.9
Sabra06G0019700 Salix brachista HOM05D007667 ORTHO05D008033 1.6e-10 71.2 245 28.2
Haze_20347 Corylus avellana HOM05D007667 ORTHO05D008033 2.1e-10 70.9 299 26.1
CSS0027019 Camellia sinensis var. sinensis HOM05D007667 ORTHO05D008033 4.6e-10 69.7 305 27.5
CANSAT01G1982 Cannabis sativa HOM05D007667 ORTHO05D008033 4.6e-10 69.7 271 24.4
MD12G1111200 Malus domestica HOM05D007667 ORTHO05D008033 7.8e-10 68.9 289 23.9
CiPaw.09G161700 Carya illinoinensis HOM05D007667 ORTHO05D008033 1.3e-09 68.2 298 27.2
Manes.08G067300 Manihot esculenta HOM05D007667 ORTHO05D008033 1.7e-09 67.8 236 28.4
Phvul.001G101500 Phaseolus vulgaris HOM05D007667 ORTHO05D008033 2.3e-09 67.4 376 24.5
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea HOM05D007667 ORTHO05D008033 3.0e-09 67.0 237 24.9
vmacro07594 Vaccinium macrocarpon HOM05D007667 ORTHO05D008033 3.9e-09 66.6 285 26.7
GSVIVG01025830001 Vitis vinifera HOM05D007667 ORTHO05D008033 3.9e-09 66.6 264 26.5
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea HOM05D007667 ORTHO05D008033 5.1e-09 66.2 236 25.0
COL.COLO4_22773 Corchorus olitorius HOM05D007667 ORTHO05D008033 5.1e-09 66.2 303 25.1
SalBow6G3030 Salvia bowleyana HOM05D007667 ORTHO05D008033 5.1e-09 66.2 92 38.0
SalBow6G3731 Salvia bowleyana HOM05D007667 ORTHO05D008033 5.1e-09 66.2 92 38.0
SGA_v2.0_scaffold66G22329 Striga asiatica HOM05D007667 ORTHO05D008033 6.6e-09 65.9 237 26.2
Migut.J01575 Erythranthe guttata HOM05D007667 ORTHO05D008033 1.9e-08 64.3 273 25.3
Potri.016G024600 Populus trichocarpa HOM05D007667 ORTHO05D008033 2.5e-08 63.9 222 29.3
Potri.006G026600 Populus trichocarpa HOM05D007667 ORTHO05D008033 4.3e-08 63.2 237 26.6
TWI77G1010 Tripterygium wilfordii HOM05D007667 ORTHO05D008033 5.6e-08 62.8 299 26.1
Glyma.03G003800 Glycine max HOM05D007667 ORTHO05D008033 1.3e-07 61.6 238 25.2
TPR.G23684 Trifolium pratense HOM05D007667 ORTHO05D008033 1.3e-07 61.6 234 26.9
Lalb_Chr14g0365211 Lupinus albus HOM05D007667 ORTHO05D008033 1.6e-07 61.2 233 26.6
RhsimUnG0021200 Rhododendron simsii HOM05D007667 ORTHO05D008033 1.6e-07 61.2 230 26.1
VMungo1383G2866 Vigna mungo HOM05D007667 ORTHO05D008033 1.6e-07 61.2 254 26.0
MSTRG.6277 Avicennia marina HOM05D007667 ORTHO05D008033 2.1e-07 60.8 92 39.1
QL07p015392 Quercus lobata HOM05D007667 ORTHO05D008033 2.1e-07 60.8 231 26.0
RcHm_v2.0_Chr3g0495051 Rosa chinensis HOM05D007667 ORTHO05D008033 2.8e-07 60.5 240 24.6
Cfa019904 Carpinus fangiana HOM05D007667 ORTHO05D008033 4.8e-07 59.7 324 24.4
Glyma.19G122200 Glycine max HOM05D007667 ORTHO05D008033 4.8e-07 59.7 342 26.0
Oeu060747.1 Olea europaea HOM05D007667 ORTHO05D008033 6.2e-07 59.3 228 26.3
Oeu041986.1 Olea europaea HOM05D007667 ORTHO05D008033 1.1e-06 58.5 244 25.8
Psat0s3111g0200 Pisum sativum HOM05D007667 ORTHO05D008033 1.1e-06 58.5 231 24.7
DCAR_020622 Daucus carota HOM05D007667 ORTHO05D008033 2.4e-06 57.4 104 31.7
Lj1g0016001 Lotus japonicus HOM05D007667 ORTHO05D008033 4.0e-06 56.6 237 24.9
Thecc.05G130400 Theobroma cacao HOM05D007667 ORTHO05D008033 4.0e-06 56.6 316 22.8
Ah.13g077440 Amaranthus hybridus HOM05D007667 ORTHO05D008033 9.0e-06 55.5 417 21.6
Medtr7g087970 Medicago truncatula HOM05D007667 ORTHO05D008033 9.0e-06 55.5 379 24.8


User provided reference genes

Program Settings