Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g08296 Brassica carinata HOM05D000031 ORTHO05D021793 9.3e-43 176.4 85 100.0
C04p34700 Brassica napus HOM05D000031 ORTHO05D041586 5.5e-27 124.0 81 72.8
BolC4t25023H Brassica oleracea HOM05D000031 ORTHO05D041586 5.5e-27 124.0 81 72.8
BcaC07g40339 Brassica carinata HOM05D000031 ORTHO05D001033 2.3e-25 118.6 86 68.6
A04p02930 Brassica napus HOM05D000031 ORTHO05D021793 2.3e-25 118.6 87 72.4
A04p02920 Brassica napus HOM05D000031 ORTHO05D001033 3.9e-25 117.9 87 71.3
A09p50670 Brassica napus HOM05D000031 ORTHO05D001033 6.7e-25 117.1 86 67.4
BcaC07g40155 Brassica carinata HOM05D000031 ORTHO05D001033 8.7e-25 116.7 86 67.4
A04p02960 Brassica napus HOM05D000031 ORTHO05D001033 8.7e-25 116.7 83 71.1
BraA04t16019Z Brassica rapa HOM05D000031 ORTHO05D001033 8.7e-25 116.7 83 71.1
BcaB02g07575 Brassica carinata HOM05D000031 ORTHO05D001033 1.9e-24 115.5 85 69.4
C04p34690 Brassica napus HOM05D000031 ORTHO05D001033 3.3e-24 114.8 87 71.3
BolC4t25022H Brassica oleracea HOM05D000031 ORTHO05D001033 3.3e-24 114.8 87 71.3
BcaB01g02436 Brassica carinata HOM05D000031 ORTHO05D001033 5.6e-24 114.0 87 66.7
A05p16590 Brassica napus HOM05D000031 ORTHO05D001033 5.6e-24 114.0 61 88.5
C06p24790 Brassica napus HOM05D000031 ORTHO05D001033 7.4e-24 113.6 85 70.6
BolC6t37631H Brassica oleracea HOM05D000031 ORTHO05D001033 7.4e-24 113.6 85 70.6
BcaB02g08295 Brassica carinata HOM05D000031 ORTHO05D001033 9.6e-24 113.2 87 67.8
BcaC07g40151 Brassica carinata HOM05D000031 ORTHO05D001033 1.3e-23 112.8 88 65.9
BcaC08g44865 Brassica carinata HOM05D000031 ORTHO05D001033 1.6e-23 112.5 85 69.4
BcaB02g07582 Brassica carinata HOM05D000031 ORTHO05D021793 2.1e-23 112.1 86 66.3
BolC4t25026H Brassica oleracea HOM05D000031 ORTHO05D042498 1.4e-22 109.4 83 68.7
BcaC07g40152 Brassica carinata HOM05D000031 ORTHO05D001033 1.8e-22 109.0 86 66.3
A09p50600 Brassica napus HOM05D000031 ORTHO05D001033 2.4e-22 108.6 83 63.9
AL5G39380 Arabidopsis lyrata HOM05D000031 ORTHO05D001033 4.0e-22 107.8 82 68.3
BcaB02g07574 Brassica carinata HOM05D000031 ORTHO05D001033 5.3e-22 107.5 80 70.0
BcaC01g06306 Brassica carinata HOM05D000031 ORTHO05D001033 5.3e-22 107.5 85 63.5
BcaC07g40154 Brassica carinata HOM05D000031 ORTHO05D001033 5.3e-22 107.5 86 66.3
A03p14650 Brassica napus HOM05D000031 ORTHO05D001033 5.3e-22 107.5 85 64.7
BolC3t14128H Brassica oleracea HOM05D000031 ORTHO05D001033 5.3e-22 107.5 85 63.5
BraA03t10756Z Brassica rapa HOM05D000031 ORTHO05D001033 5.3e-22 107.5 85 64.7
BraA09t40510Z Brassica rapa HOM05D000031 ORTHO05D001033 5.3e-22 107.5 88 62.5
C04p34720 Brassica napus HOM05D000031 ORTHO05D042498 4.5e-21 104.4 64 76.6
Thhalv10006481m.g Eutrema salsugineum HOM05D000031 ORTHO05D001033 1.0e-20 103.2 85 65.9
Thhalv10006091m.g Eutrema salsugineum HOM05D000031 ORTHO05D001033 1.7e-20 102.4 88 63.6
C03p17140 Brassica napus HOM05D000031 ORTHO05D001033 2.9e-20 101.7 85 62.4
C04p34650 Brassica napus HOM05D000031 ORTHO05D001033 2.9e-20 101.7 77 70.1
CARHR168010 Cardamine hirsuta HOM05D000031 ORTHO05D001033 2.9e-20 101.7 83 66.3
Aa31LG10G12460 Aethionema arabicum HOM05D000031 ORTHO05D001033 6.5e-20 100.5 85 61.2
Aa31sc1360G30 Aethionema arabicum HOM05D000031 ORTHO05D001033 8.4e-20 100.1 84 61.9
BcaC02g09960 Brassica carinata HOM05D000031 ORTHO05D001033 1.1e-19 99.8 81 64.2
BolC8t50934H Brassica oleracea HOM05D000031 ORTHO05D001033 1.9e-19 99.0 80 60.0
BraA04t16016Z Brassica rapa HOM05D000031 ORTHO05D001033 5.5e-19 97.4 73 67.1
Thhalv10006099m.g Eutrema salsugineum HOM05D000031 ORTHO05D001033 1.2e-18 96.3 82 68.3
A09p50620 Brassica napus HOM05D000031 ORTHO05D001033 1.6e-18 95.9 72 68.1
Aa31LG10G12500 Aethionema arabicum HOM05D000031 ORTHO05D001033 3.5e-18 94.7 85 61.2
A07p23650 Brassica napus HOM05D000031 ORTHO05D021793 3.5e-18 94.7 57 75.4
BolC4t25020H Brassica oleracea HOM05D000031 ORTHO05D001033 1.3e-17 92.8 76 63.2
C08p33360 Brassica napus HOM05D000031 ORTHO05D001033 2.3e-17 92.0 83 59.0
C04p34610 Brassica napus HOM05D000031 ORTHO05D001033 7.4e-16 87.0 44 86.4
C06p24780 Brassica napus HOM05D000031 ORTHO05D021793 6.9e-14 80.5 85 54.1
BolC6t37630H Brassica oleracea HOM05D000031 ORTHO05D021793 3.4e-13 78.2 85 52.9
AL4G40690 Arabidopsis lyrata HOM05D000031 ORTHO05D001033 5.5e-11 70.9 82 48.8
BolC4t21981H Brassica oleracea HOM05D001334 ORTHO05D001119 7.2e-11 70.5 88 48.9
A09p50560 Brassica napus HOM05D000031 ORTHO05D001033 4.6e-10 67.8 86 48.8
C04p03470 Brassica napus HOM05D000031 ORTHO05D096999 7.9e-10 67.0 64 57.8
THA.LOC104802335 Tarenaya hassleriana HOM05D000031 ORTHO05D001033 1.0e-09 66.6 87 42.5
Aa31sc1360G10 Aethionema arabicum HOM05D000031 ORTHO05D001033 7.4e-08 60.5 86 43.0
A09p50610 Brassica napus HOM05D000031 ORTHO05D001033 1.3e-07 59.7 86 43.0
AL4G17380 Arabidopsis lyrata HOM05D000031 ORTHO05D001033 1.7e-07 59.3 89 40.4
BcaB01g02797 Brassica carinata HOM05D000031 ORTHO05D001033 2.8e-07 58.5 88 44.3
BcaC07g39602 Brassica carinata HOM05D000031 ORTHO05D001033 3.7e-07 58.2 89 40.4
C08p27590 Brassica napus HOM05D000031 ORTHO05D001033 3.7e-07 58.2 89 40.4
BolC8t50378H Brassica oleracea HOM05D000031 ORTHO05D001033 3.7e-07 58.2 89 40.4
Aa31LG10G12480 Aethionema arabicum HOM05D000031 ORTHO05D001033 4.8e-07 57.8 90 42.2
AL5G39370 Arabidopsis lyrata HOM05D000031 ORTHO05D001033 4.8e-07 57.8 89 41.6
BcaB03g14606 Brassica carinata HOM05D000031 ORTHO05D001033 4.8e-07 57.8 88 42.0
CARHR168000 Cardamine hirsuta HOM05D000031 ORTHO05D001033 4.8e-07 57.8 89 40.4
BcaC02g09959 Brassica carinata HOM05D030396 ORTHO05D013234 6.3e-07 57.4 37 78.4
C04p34640 Brassica napus HOM05D030396 ORTHO05D100042 6.3e-07 57.4 37 78.4
A03p28490 Brassica napus HOM05D000031 ORTHO05D001033 8.2e-07 57.0 88 42.0
CARHR167990 Cardamine hirsuta HOM05D000031 ORTHO05D001033 1.4e-06 56.2 89 43.8
BcaB01g00378 Brassica carinata HOM05D000031 ORTHO05D001033 1.8e-06 55.8 89 39.3
CARHR167840 Cardamine hirsuta HOM05D000031 ORTHO05D001033 3.1e-06 55.1 88 40.9
C03p34430 Brassica napus HOM05D000031 ORTHO05D001033 4.1e-06 54.7 88 42.0
Sabra02G0002100 Salix brachista HOM05D000031 ORTHO05D001033 4.1e-06 54.7 83 38.6
AL5G39360 Arabidopsis lyrata HOM05D000031 ORTHO05D001033 5.3e-06 54.3 77 42.9
BcaC01g04726 Brassica carinata HOM05D000031 ORTHO05D001033 5.3e-06 54.3 87 41.4
BolC3t15752H Brassica oleracea HOM05D000031 ORTHO05D001033 5.3e-06 54.3 87 41.4
AT3G57720 Arabidopsis thaliana HOM05D000031 ORTHO05D001033 6.9e-06 53.9 89 38.2
CARHR167860 Cardamine hirsuta HOM05D000031 ORTHO05D001033 6.9e-06 53.9 90 41.1


User provided reference genes

Program Settings