Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g08136 Brassica carinata HOM05D003513 ORTHO05D004660 5.3e-30 133.7 66 100.0
BcaB04g17698 Brassica carinata HOM05D003513 ORTHO05D004660 4.0e-17 90.9 65 76.9
BcaB07g32937 Brassica carinata HOM05D003513 ORTHO05D004660 4.4e-16 87.4 54 87.0
A05p21550 Brassica napus HOM05D003513 ORTHO05D004660 3.1e-14 81.3 53 83.0
BraA05t21075Z Brassica rapa HOM05D003513 ORTHO05D004660 3.1e-14 81.3 53 83.0
BcaC06g33105 Brassica carinata HOM05D005554 ORTHO05D021652 4.1e-14 80.9 54 83.3
C03p42610 Brassica napus HOM05D003513 ORTHO05D004660 9.2e-14 79.7 48 83.3
C08p46960 Brassica napus HOM05D003513 ORTHO05D013524 9.2e-14 79.7 52 80.8
BolC8t52234H Brassica oleracea HOM05D003513 ORTHO05D004660 2.0e-13 78.6 52 80.8
BolC3t16531H Brassica oleracea HOM05D003513 ORTHO05D004660 2.7e-13 78.2 48 83.3
BcaB07g30213 Brassica carinata HOM05D005554 ORTHO05D021652 5.9e-13 77.0 45 88.9
BraA03t12683Z Brassica rapa HOM05D003513 ORTHO05D004660 5.9e-13 77.0 48 81.2
A04p12810 Brassica napus HOM05D003513 ORTHO05D013524 7.8e-13 76.6 52 75.0
A06p18750 Brassica napus HOM05D003513 ORTHO05D013524 7.8e-13 76.6 52 75.0
A06p48950 Brassica napus HOM05D003513 ORTHO05D013524 7.8e-13 76.6 52 75.0
A07p17600 Brassica napus HOM05D003513 ORTHO05D013524 7.8e-13 76.6 52 75.0
BraA04t16944Z Brassica rapa HOM05D003513 ORTHO05D013524 7.8e-13 76.6 52 75.0
A03p63010 Brassica napus HOM05D003513 ORTHO05D013524 1.0e-12 76.3 52 75.0
A04p04130 Brassica napus HOM05D003513 ORTHO05D004660 1.0e-12 76.3 52 75.0
C07p28040 Brassica napus HOM05D003513 ORTHO05D013524 1.0e-12 76.3 52 75.0
BraA03t15374Z Brassica rapa HOM05D003513 ORTHO05D004660 1.0e-12 76.3 52 75.0
A03p35030 Brassica napus HOM05D003513 ORTHO05D004660 1.3e-12 75.9 39 89.7
BcaB05g23799 Brassica carinata HOM05D003513 ORTHO05D004660 1.7e-12 75.5 45 86.7
BcaB06g26524 Brassica carinata HOM05D005554 ORTHO05D021652 5.0e-12 73.9 36 97.2
BcaC08g44431 Brassica carinata HOM05D003513 ORTHO05D013524 5.0e-12 73.9 44 81.8
A09p29610 Brassica napus HOM05D003513 ORTHO05D004660 1.1e-11 72.8 52 73.1
Sp3g05980 Schrenkiella parvula HOM05D003513 ORTHO05D004660 1.9e-11 72.0 47 74.5
Thhalv10021452m.g Eutrema salsugineum HOM05D003513 ORTHO05D004660 2.5e-11 71.6 48 77.1
A05p38730 Brassica napus HOM05D000051 ORTHO05D033618 4.3e-11 70.9 41 82.9
BcaC04g20358 Brassica carinata HOM05D003513 ORTHO05D004660 1.8e-09 65.5 35 82.9
BraA01t02793Z Brassica rapa HOM05D004336 ORTHO05D004660 1.2e-08 62.8 29 96.6
BolC9t57326H Brassica oleracea HOM05D004336 ORTHO05D005367 2.6e-08 61.6 29 93.1
AL3G45960 Arabidopsis lyrata HOM05D003513 ORTHO05D004660 1.3e-07 59.3 48 66.7
C06p18700 Brassica napus HOM05D003513 ORTHO05D013524 1.7e-07 58.9 28 96.4
BraA09t39125Z Brassica rapa HOM05D003513 ORTHO05D013524 1.7e-07 58.9 28 96.4
Carub.0003s2847 Capsella rubella HOM05D003513 ORTHO05D004660 2.9e-07 58.2 44 68.2
BraA07t29479Z Brassica rapa HOM05D003513 ORTHO05D013524 6.4e-07 57.0 28 92.9
A03p66870 Brassica napus HOM05D004336 ORTHO05D005367 8.3e-07 56.6 29 93.1
Aa31LG8G12720 Aethionema arabicum HOM05D003513 ORTHO05D004660 1.9e-06 55.5 39 71.8
CARHR105270 Cardamine hirsuta HOM05D003513 ORTHO05D004660 4.1e-06 54.3 39 74.4
Glyma.13G253000 Glycine max HOM05D003513 ORTHO05D004660 9.2e-06 53.1 37 64.9


User provided reference genes

Program Settings