Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g08106 Brassica carinata HOM05D000003 ORTHO05D015466 5.6e-198 694.1 360 100.0
BcaB07g32270 Brassica carinata HOM05D000496 ORTHO05D000411 6.4e-85 318.5 359 47.9
BcaC01g00511 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-70 269.2 278 50.4
BcaNung01080 Brassica carinata HOM05D000003 ORTHO05D001498 2.9e-69 266.5 332 48.5
BcaB01g04400 Brassica carinata HOM05D000003 ORTHO05D000411 1.9e-65 253.8 320 45.3
BcaB03g16045 Brassica carinata HOM05D000003 ORTHO05D001498 1.4e-63 247.7 352 42.3
BcaC04g23534 Brassica carinata HOM05D000003 ORTHO05D000411 1.3e-61 241.1 340 41.2
BcaB04g20334 Brassica carinata HOM05D000013 ORTHO05D000011 5.5e-60 235.7 262 48.5
BcaB07g30505 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-59 234.6 125 94.4
A06p37020 Brassica napus HOM05D000496 ORTHO05D000411 1.2e-59 234.6 381 38.6
BolC6t37172H Brassica oleracea HOM05D000496 ORTHO05D000411 6.2e-56 222.2 379 37.5
BcaC07g38247 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-55 219.9 361 38.5
BcaB04g17942 Brassica carinata HOM05D000496 ORTHO05D000411 4.9e-53 212.6 365 38.6
BcaB02g07414 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-52 209.9 362 36.5
BraA01t02968Z Brassica rapa HOM05D000496 ORTHO05D000411 3.5e-51 206.5 217 47.0
BcaC03g16617 Brassica carinata HOM05D000003 ORTHO05D000411 4.6e-51 206.1 235 46.4
BcaB02g10370 Brassica carinata HOM05D000003 ORTHO05D000411 2.8e-48 196.8 236 44.1
BcaB01g02280 Brassica carinata HOM05D000003 ORTHO05D001498 2.0e-46 190.7 273 43.2
BcaC04g21727 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-44 184.9 179 49.7
BcaC02g09446 Brassica carinata HOM05D000003 ORTHO05D014990 3.2e-44 183.3 298 39.6
BcaC06g35739 Brassica carinata HOM05D000003 ORTHO05D027234 7.9e-43 178.7 313 37.1
BolC3t21278H Brassica oleracea HOM05D000496 ORTHO05D000411 3.3e-41 173.3 173 50.9
BcaB07g33807 Brassica carinata HOM05D000003 ORTHO05D027300 7.4e-41 172.2 193 43.5
BcaC09g49394 Brassica carinata HOM05D000003 ORTHO05D000411 3.4e-38 163.3 325 35.1
CARHR153140 Cardamine hirsuta HOM05D000003 ORTHO05D014990 7.7e-38 162.2 324 34.3
BcaC08g44974 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-37 161.4 359 32.0
BcaB07g33968 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-37 160.6 360 32.2
BcaC03g14538 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-35 154.5 356 31.5
BcaB06g26654 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-35 153.7 358 31.8
BcaB07g32767 Brassica carinata HOM05D000003 ORTHO05D001498 1.0e-34 151.8 155 51.6
BcaC05g27635 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-34 150.6 356 32.9
BcaC06g30852 Brassica carinata HOM05D000003 ORTHO05D015466 2.3e-34 150.6 202 45.0
BcaC04g21327 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-33 147.5 348 31.3
BcaC05g28478 Brassica carinata HOM05D000496 ORTHO05D000411 4.3e-33 146.4 358 30.7
BcaC09g48293 Brassica carinata HOM05D000496 ORTHO05D000411 5.7e-33 146.0 130 56.2
BcaB01g00895 Brassica carinata HOM05D000003 ORTHO05D015466 6.3e-32 142.5 234 41.0
BcaB02g07030 Brassica carinata HOM05D000003 ORTHO05D015466 6.9e-31 139.0 240 40.8
BcaC02g11125 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-30 137.9 130 53.8
BcaC06g34830 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-30 136.7 358 30.2
BcaC01g01228 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-29 135.2 130 51.5
BcaC07g37288 Brassica carinata HOM05D000496 ORTHO05D000411 8.5e-29 132.1 135 48.1
BcaB02g10097 Brassica carinata HOM05D000003 ORTHO05D001498 1.4e-28 131.3 215 39.5
BcaB01g03710 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-28 129.8 110 50.0
BcaC05g28073 Brassica carinata HOM05D000003 ORTHO05D000411 5.5e-28 129.4 330 29.4
BcaB03g15502 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-26 125.2 131 48.9
A06p09140 Brassica napus HOM05D018006 ORTHO05D015466 1.4e-26 124.8 217 38.2
Thhalv10028300m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.1e-25 121.7 224 37.5
BcaB08g34742 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-24 117.5 121 45.5
BolC7t40581H Brassica oleracea HOM05D018006 ORTHO05D015466 1.8e-23 114.4 179 37.4
C07p01780 Brassica napus HOM05D018006 ORTHO05D015466 2.4e-23 114.0 179 37.4
BolC4t26206H Brassica oleracea HOM05D021332 ORTHO05D016015 4.1e-23 113.2 185 42.7
BcaB02g11485 Brassica carinata HOM05D000003 ORTHO05D011793 5.9e-22 109.4 217 32.7
BcaB06g26959 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-21 107.5 221 30.3
BcaB03g16371 Brassica carinata HOM05D000003 ORTHO05D015466 5.0e-21 106.3 196 38.8
BcaC05g28885 Brassica carinata HOM05D010131 ORTHO05D011793 8.5e-21 105.5 194 32.5
BcaC09g48325 Brassica carinata HOM05D000496 ORTHO05D000411 8.5e-21 105.5 344 29.7
BolC3t20758H Brassica oleracea HOM05D000003 ORTHO05D014990 2.5e-20 104.0 118 48.3
BcaB07g33879 Brassica carinata HOM05D000003 ORTHO05D015466 2.1e-19 100.9 185 38.4
BcaC07g39752 Brassica carinata HOM05D000496 ORTHO05D000411 3.6e-19 100.1 91 46.2
BcaC07g37731 Brassica carinata HOM05D000003 ORTHO05D001498 4.7e-19 99.8 210 33.8
BcaB06g27718 Brassica carinata HOM05D000003 ORTHO05D001498 3.0e-18 97.1 131 44.3
BcaC01g02365 Brassica carinata HOM05D000003 ORTHO05D001498 8.8e-18 95.5 217 28.1
BcaC08g43020 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-17 94.4 314 27.1
BcaB04g18843 Brassica carinata HOM05D000003 ORTHO05D001498 2.6e-17 94.0 134 41.0
BolC9t55896H Brassica oleracea HOM05D000003 ORTHO05D027300 3.3e-17 93.6 259 32.8
BcaB08g35582 Brassica carinata HOM05D000003 ORTHO05D016015 1.3e-16 91.7 250 31.2
BcaC09g49068 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-16 90.9 81 49.4
BcaB06g25900 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-16 90.5 380 26.6
BcaC09g49067 Brassica carinata HOM05D000003 ORTHO05D016015 3.7e-16 90.1 184 35.9
BraA06t25752Z Brassica rapa HOM05D000003 ORTHO05D014990 4.8e-16 89.7 224 33.9
BcaC06g35182 Brassica carinata HOM05D000496 ORTHO05D017591 6.3e-16 89.4 303 28.7
BcaB05g22054 Brassica carinata HOM05D000003 ORTHO05D001498 1.1e-15 88.6 205 33.7
BcaB03g15483 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-15 88.2 210 31.0
CARHR116610 Cardamine hirsuta HOM05D000003 ORTHO05D014990 4.1e-15 86.7 103 43.7
BcaC01g00782 Brassica carinata HOM05D000496 ORTHO05D011793 5.3e-15 86.3 216 26.4
BcaC01g00817 Brassica carinata HOM05D000003 ORTHO05D014990 5.3e-15 86.3 217 31.3
BraA07t29214Z Brassica rapa HOM05D000003 ORTHO05D027300 5.3e-15 86.3 231 30.3
BcaC09g49291 Brassica carinata HOM05D000496 ORTHO05D000411 7.0e-15 85.9 308 26.6
CARHR150970 Cardamine hirsuta HOM05D000496 ORTHO05D000411 1.2e-14 85.1 89 41.6
BcaB06g29541 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-14 84.7 86 39.5
BcaC08g45326 Brassica carinata HOM05D010131 ORTHO05D011793 1.6e-14 84.7 202 30.7
BcaB05g21700 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-14 84.3 304 27.0
BcaC06g36003 Brassica carinata HOM05D000496 ORTHO05D021714 2.0e-14 84.3 312 26.3
BcaB04g17647 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-14 84.0 308 26.0
BolC7t43106H Brassica oleracea HOM05D018006 ORTHO05D015466 2.7e-14 84.0 96 50.0
Thhalv10003091m.g Eutrema salsugineum HOM05D000496 ORTHO05D011793 3.5e-14 83.6 283 23.7
BcaC06g35337 Brassica carinata HOM05D000003 ORTHO05D000006 7.7e-14 82.4 90 44.4
Thhalv10009818m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.9e-13 80.5 360 23.3
Thhalv10017646m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.8e-13 80.1 106 40.6
BcaB01g03263 Brassica carinata HOM05D000496 ORTHO05D000411 6.5e-13 79.3 313 24.6
BcaC01g00202 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-12 78.6 89 37.1
BcaB03g15249 Brassica carinata HOM05D000003 ORTHO05D016015 1.5e-12 78.2 126 39.7
BcaC05g27187 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-12 77.8 318 28.0
AT5G36225 Arabidopsis thaliana HOM05D000496 ORTHO05D000411 3.2e-12 77.0 88 38.6
Sp3g22020 Schrenkiella parvula HOM05D000003 ORTHO05D014990 1.2e-11 75.1 181 33.1
BcaB01g01579 Brassica carinata HOM05D000003 ORTHO05D001498 6.1e-11 72.8 186 32.3
BcaC06g36381 Brassica carinata HOM05D000003 ORTHO05D000006 6.1e-11 72.8 85 44.7
Sp7g10500 Schrenkiella parvula HOM05D000003 ORTHO05D016015 8.0e-11 72.4 72 54.2
BcaB02g11060 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-10 72.0 101 33.7
BraA06t23472Z Brassica rapa HOM05D010131 ORTHO05D011793 1.5e-09 68.2 105 35.2
BcaB01g00785 Brassica carinata HOM05D010131 ORTHO05D011793 4.4e-09 66.6 167 25.1
BcaC01g03351 Brassica carinata HOM05D010131 ORTHO05D011793 4.4e-09 66.6 144 29.9
BcaB01g02832 Brassica carinata HOM05D000496 ORTHO05D000411 5.7e-09 66.2 311 24.4
C05p43650 Brassica napus HOM05D000496 ORTHO05D000411 9.8e-09 65.5 170 27.6
Aa31LG9G15190 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.7e-08 64.7 81 34.6
BolC5t32458H Brassica oleracea HOM05D067900 ORTHO05D043178 1.7e-08 64.7 78 41.0
BcaB07g33683 Brassica carinata HOM05D000003 ORTHO05D000006 2.8e-08 63.9 202 26.7
BolC7t41620H Brassica oleracea HOM05D000496 ORTHO05D000411 2.8e-08 63.9 48 54.2
BcaC08g42965 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-08 63.5 87 29.9
BcaC05g27874 Brassica carinata HOM05D000496 ORTHO05D000411 4.8e-08 63.2 310 24.8
BcaB02g08512 Brassica carinata HOM05D000496 ORTHO05D000411 6.3e-08 62.8 105 32.4
BcaB07g33425 Brassica carinata HOM05D000496 ORTHO05D000411 6.3e-08 62.8 70 38.6
Sp5g32330 Schrenkiella parvula HOM05D000003 ORTHO05D014990 6.3e-08 62.8 150 29.3
BcaB01g00478 Brassica carinata HOM05D000496 ORTHO05D000411 8.3e-08 62.4 87 29.9
Aa31LG9G3350 Aethionema arabicum HOM05D000496 ORTHO05D000411 1.4e-07 61.6 132 24.2
BcaC07g39607 Brassica carinata HOM05D000003 ORTHO05D001498 1.8e-07 61.2 135 32.6
Aa31sc1015G10 Aethionema arabicum HOM05D000496 ORTHO05D000411 3.1e-07 60.5 87 28.7
BcaB01g06142 Brassica carinata HOM05D000496 ORTHO05D000411 4.1e-07 60.1 114 31.6
BcaC06g36164 Brassica carinata HOM05D000496 ORTHO05D000411 4.1e-07 60.1 105 31.4
BolC5t31757H Brassica oleracea HOM05D010131 ORTHO05D011793 4.1e-07 60.1 81 39.5
Carub.0008s0689 Capsella rubella HOM05D000496 ORTHO05D000411 4.1e-07 60.1 183 26.2
Aa31LG5G23740 Aethionema arabicum HOM05D000496 ORTHO05D000411 7.0e-07 59.3 87 28.7
Aa31sc387G10 Aethionema arabicum HOM05D000496 ORTHO05D000411 9.1e-07 58.9 87 28.7
BcaC05g27475 Brassica carinata HOM05D000496 ORTHO05D011507 9.1e-07 58.9 184 26.6
BolC1t05055H Brassica oleracea HOM05D010131 ORTHO05D011793 9.1e-07 58.9 122 33.6
C07p22620 Brassica napus HOM05D018006 ORTHO05D015466 1.2e-06 58.5 110 34.5
BolC2t11809H Brassica oleracea HOM05D000496 ORTHO05D000411 1.2e-06 58.5 88 35.2
BolC7t42797H Brassica oleracea HOM05D018006 ORTHO05D015466 1.2e-06 58.5 110 35.5
Aa31LG7G10450 Aethionema arabicum HOM05D000496 ORTHO05D000411 1.6e-06 58.2 88 28.4
BolC2t07767H Brassica oleracea HOM05D010131 ORTHO05D011793 2.0e-06 57.8 170 26.5
Sp3g27490 Schrenkiella parvula HOM05D000496 ORTHO05D014887 2.0e-06 57.8 93 37.6
BcaC06g36253 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-06 57.4 102 32.4
BolC7t41031H Brassica oleracea HOM05D000496 ORTHO05D000411 2.7e-06 57.4 111 30.6
BraA03t15710Z Brassica rapa HOM05D000003 ORTHO05D014990 2.7e-06 57.4 148 31.8
COL.COLO4_10561 Corchorus olitorius HOM05D000003 ORTHO05D000126 2.7e-06 57.4 228 22.8
Aa31LG6G9170 Aethionema arabicum HOM05D000496 ORTHO05D000411 3.5e-06 57.0 87 26.4
BcaC09g48310 Brassica carinata HOM05D000003 ORTHO05D000006 3.5e-06 57.0 67 38.8
BolC3t19344H Brassica oleracea HOM05D010131 ORTHO05D011793 3.5e-06 57.0 71 36.6
Aa31sc914G60 Aethionema arabicum HOM05D000496 ORTHO05D000411 4.5e-06 56.6 80 31.2
BcaB03g13651 Brassica carinata HOM05D000003 ORTHO05D021670 4.5e-06 56.6 79 38.0
BolC1t03268H Brassica oleracea HOM05D000003 ORTHO05D014990 4.5e-06 56.6 92 35.9
Aa31sc480G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.9e-06 56.2 87 28.7
A08p06890 Brassica napus HOM05D000003 ORTHO05D027300 5.9e-06 56.2 75 38.7
AL8G23770 Arabidopsis lyrata HOM05D000496 ORTHO05D000411 7.7e-06 55.8 87 31.0


User provided reference genes

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