Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 5.9e-206 720.7 378 100.0
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 4.5e-182 641.3 369 92.7
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 5.5e-180 634.4 366 92.9
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 7.2e-180 634.0 375 90.7
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 9.4e-180 633.6 376 89.9
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 1.2e-179 633.3 362 92.5
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 6.8e-178 627.5 369 91.1
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 6.8e-178 627.5 369 91.1
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 4.4e-177 624.8 371 90.6
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 1.0e-173 613.6 369 89.2
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 8.5e-173 610.5 369 88.9
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 8.5e-173 610.5 369 88.9
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 2.0e-166 589.3 351 88.9
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 8.9e-162 573.9 384 78.6
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 8.9e-162 573.9 372 82.5
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 1.3e-160 570.1 357 84.9
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 8.3e-160 567.4 366 81.4
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 4.1e-159 565.1 366 82.2
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 4.1e-159 565.1 366 82.2
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 2.0e-158 562.8 375 80.5
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 2.7e-158 562.4 366 80.9
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 3.5e-158 562.0 369 80.8
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 4.6e-158 561.6 360 82.2
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.3e-157 560.1 366 80.9
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 1.7e-157 559.7 370 81.9
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 2.3e-157 559.3 368 79.6
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 3.9e-157 558.5 367 81.2
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 5.0e-157 558.1 365 78.1
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 5.0e-157 558.1 366 80.9
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 5.0e-157 558.1 363 81.8
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 6.6e-157 557.8 366 80.6
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 4.3e-156 555.1 364 79.9
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 5.6e-156 554.7 368 78.3
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 7.3e-156 554.3 365 77.5
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 9.5e-156 553.9 369 79.7
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 9.5e-156 553.9 345 84.6
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 2.1e-155 552.7 345 84.3
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 3.6e-155 552.0 368 80.2
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 3.6e-155 552.0 360 80.6
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 3.6e-155 552.0 372 79.6
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 6.2e-155 551.2 361 81.2
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 8.0e-155 550.8 362 77.9
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 8.0e-155 550.8 358 82.1
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 8.0e-155 550.8 366 75.4
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 1.4e-154 550.1 362 77.3
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 1.4e-154 550.1 378 78.8
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 1.8e-154 549.7 368 79.9
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.8e-154 549.7 368 79.9
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 1.8e-154 549.7 362 77.9
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 3.1e-154 548.9 360 81.9
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 4.0e-154 548.5 368 79.9
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 4.0e-154 548.5 364 81.3
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 4.0e-154 548.5 362 77.3
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 6.8e-154 547.7 368 80.2
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 6.8e-154 547.7 369 78.3
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 8.9e-154 547.4 369 78.0
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 8.9e-154 547.4 362 77.3
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 3.4e-153 545.4 360 78.3
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 9.8e-153 543.9 367 78.5
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 1.3e-152 543.5 360 79.4
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 1.3e-152 543.5 368 79.3
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 1.3e-152 543.5 360 76.7
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.7e-152 543.1 368 79.3
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 2.2e-152 542.7 380 77.1
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 2.2e-152 542.7 363 79.3
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 8.3e-152 540.8 380 78.2
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 2.0e-150 536.2 348 85.3
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 2.0e-150 536.2 319 83.1
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 4.6e-150 535.0 372 76.6
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 2.3e-149 532.7 368 78.5
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 8.6e-149 530.8 360 74.4
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 8.6e-149 530.8 359 78.6
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 8.6e-149 530.8 351 79.2
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 8.6e-149 530.8 359 78.0
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 1.1e-148 530.4 371 72.8
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 1.1e-148 530.4 351 79.2
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 1.5e-148 530.0 379 75.5
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 1.9e-148 529.6 362 72.7
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 2.5e-148 529.3 366 77.0
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 9.5e-148 527.3 351 78.9
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 9.5e-148 527.3 359 74.7
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 9.5e-148 527.3 376 76.6
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 1.2e-147 526.9 348 77.0
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 1.2e-147 526.9 364 78.0
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 2.1e-147 526.2 360 74.4
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 2.8e-147 525.8 365 77.0
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 2.8e-147 525.8 341 77.4
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 3.6e-147 525.4 359 78.3
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 3.6e-147 525.4 367 76.6
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 3.6e-147 525.4 360 73.9
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 4.7e-147 525.0 357 75.1
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 4.0e-146 521.9 356 73.3
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 8.9e-146 520.8 357 73.9
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 3.4e-145 518.8 376 75.3
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 3.4e-145 518.8 365 72.6
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 3.4e-145 518.8 316 82.6
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 4.4e-145 518.5 448 65.4
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 1.7e-144 516.5 369 71.5
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 6.4e-144 514.6 340 79.1
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 2.4e-143 512.7 375 71.5
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 2.4e-143 512.7 365 71.5
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 2.4e-143 512.7 359 75.5
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 3.2e-143 512.3 360 76.1
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 4.1e-143 511.9 372 78.5
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 2.1e-142 509.6 365 71.2
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 2.1e-142 509.6 365 71.0
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 3.5e-142 508.8 320 78.8
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 3.5e-142 508.8 379 69.7
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 4.6e-142 508.4 379 69.4
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.0e-141 507.3 365 70.7
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 1.3e-141 506.9 357 74.5
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 2.3e-141 506.1 375 69.6
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 3.0e-141 505.8 375 70.1
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 6.6e-141 504.6 371 73.6
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 1.1e-140 503.8 312 78.2
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 3.6e-139 498.8 300 81.0
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 4.7e-139 498.4 313 78.6
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 6.2e-139 498.0 387 66.9
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 8.1e-139 497.7 327 78.6
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 3.1e-138 495.7 347 76.4
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 4.0e-138 495.4 359 70.2
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 8.4e-136 487.6 307 80.1
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 8.4e-136 487.6 361 67.9
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 2.1e-134 483.0 366 67.2
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 2.3e-133 479.6 303 83.8
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 1.6e-131 473.4 361 67.3
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 2.4e-130 469.5 376 70.2
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 4.0e-130 468.8 369 70.7
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 1.7e-128 463.4 343 72.3
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 1.9e-127 459.9 367 69.8
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 3.2e-127 459.1 291 83.8
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 1.9e-124 449.9 387 63.3
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 9.6e-124 447.6 283 77.4
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 9.0e-122 441.0 381 64.0
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 6.4e-120 434.9 325 64.0
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 2.7e-118 429.5 357 66.1
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 7.9e-118 427.9 336 61.6
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 1.4e-114 417.2 298 65.8
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 9.0e-114 414.5 357 58.8
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 1.5e-113 413.7 263 78.3
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 3.4e-113 412.5 299 65.9
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 1.3e-112 410.6 298 63.4
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 1.3e-112 410.6 346 65.3
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 3.8e-112 409.1 360 60.8
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 2.5e-108 396.4 221 89.1
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 6.2e-107 391.7 302 62.6
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 4.0e-106 389.0 431 52.4
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 1.3e-104 384.0 350 64.0
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 4.3e-92 342.4 299 58.2
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 4.3e-92 342.4 233 74.7
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 8.8e-85 318.2 238 63.9
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 1.0e-77 294.7 242 68.2
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 1.8e-66 257.3 150 82.7
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 1.3e-59 234.6 310 49.4
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 3.8e-56 223.0 170 70.6
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 1.8e-50 204.1 170 60.6
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 9.5e-39 165.2 164 54.9
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 1.9e-31 141.0 95 74.7
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 1.1e-29 135.2 293 30.7
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 3.5e-25 120.2 340 28.2
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 1.3e-24 118.2 97 62.9
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 3.0e-24 117.1 65 80.0
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 2.1e-22 110.9 298 28.9
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 5.8e-20 102.8 87 80.5
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 1.7e-19 101.3 67 74.6
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 1.7e-19 101.3 67 74.6
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 3.8e-19 100.1 89 74.2
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 1.4e-18 98.2 67 73.1
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.9e-18 97.8 240 33.8
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 1.2e-17 95.1 377 25.5
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 4.3e-15 86.7 68 72.1
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 2.4e-13 80.9 59 69.5
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 3.8e-11 73.6 108 36.1
Cpa.g.c48203 Carica papaya HOM05D003970 ORTHO05D004615 3.5e-09 67.0 69 76.8
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 6.0e-09 66.2 33 90.9
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 4.3e-07 60.1 49 59.2


User provided reference genes

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