Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 5.2e-88 327.8 179 100.0
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 9.2e-85 317.0 179 95.0
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 9.2e-85 317.0 179 95.0
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 9.2e-85 317.0 179 95.0
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 5.1e-83 311.2 179 93.9
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 3.3e-82 308.5 180 93.9
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 2.7e-76 288.9 180 87.2
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 2.8e-73 278.9 175 86.9
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 1.3e-67 260.0 181 79.6
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 3.7e-65 251.9 181 76.8
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 3.8e-62 241.9 181 76.8
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 1.6e-52 209.9 170 67.6
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 1.8e-51 206.5 169 68.0
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 3.8e-46 188.7 114 81.6
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 3.2e-45 185.7 114 81.6
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 3.2e-45 185.7 114 81.6
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 7.2e-45 184.5 110 83.6
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 1.2e-44 183.7 113 81.4
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 2.1e-44 183.0 106 84.9
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 4.6e-44 181.8 106 84.0
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 4.6e-44 181.8 140 67.9
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 4.6e-44 181.8 114 80.7
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 4.6e-44 181.8 109 84.4
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 6.1e-44 181.4 165 61.2
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 7.9e-44 181.0 112 81.2
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 7.9e-44 181.0 109 84.4
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 1.4e-43 180.3 101 90.1
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 1.4e-43 180.3 107 86.0
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 1.8e-43 179.9 115 80.0
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 1.8e-43 179.9 140 67.9
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 2.3e-43 179.5 109 83.5
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 2.3e-43 179.5 114 78.9
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 3.0e-43 179.1 109 81.7
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 5.1e-43 178.3 109 78.9
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 5.1e-43 178.3 117 78.6
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 5.1e-43 178.3 106 84.0
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 5.1e-43 178.3 99 88.9
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 6.7e-43 177.9 109 79.8
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 6.7e-43 177.9 118 78.0
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 6.7e-43 177.9 106 82.1
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 8.8e-43 177.6 114 77.2
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 8.8e-43 177.6 114 77.2
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 8.8e-43 177.6 162 63.0
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 8.8e-43 177.6 121 74.4
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 8.8e-43 177.6 109 81.7
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 8.8e-43 177.6 115 79.1
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 1.1e-42 177.2 117 80.3
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 1.5e-42 176.8 109 79.8
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 1.5e-42 176.8 103 84.5
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 1.5e-42 176.8 114 76.3
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 1.5e-42 176.8 106 84.0
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 1.5e-42 176.8 172 61.0
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 1.5e-42 176.8 111 80.2
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 1.5e-42 176.8 101 88.1
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 1.5e-42 176.8 163 61.3
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 1.5e-42 176.8 114 76.3
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 1.5e-42 176.8 106 81.1
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 2.0e-42 176.4 114 76.3
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 2.0e-42 176.4 117 77.8
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 2.0e-42 176.4 116 77.6
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 2.5e-42 176.0 118 78.0
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 4.3e-42 175.3 120 75.8
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 5.7e-42 174.9 114 75.4
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 5.7e-42 174.9 114 75.4
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 5.7e-42 174.9 114 75.4
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 5.7e-42 174.9 109 81.7
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 7.4e-42 174.5 166 58.4
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 9.7e-42 174.1 106 78.3
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 9.7e-42 174.1 106 78.3
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 1.3e-41 173.7 144 65.3
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 1.3e-41 173.7 113 77.0
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.3e-41 173.7 106 79.2
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 1.7e-41 173.3 110 76.4
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 1.7e-41 173.3 115 77.4
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 1.7e-41 173.3 114 76.3
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 1.7e-41 173.3 111 79.3
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 2.2e-41 172.9 114 75.4
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 2.2e-41 172.9 117 76.1
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 2.2e-41 172.9 108 79.6
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 2.8e-41 172.6 112 76.8
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 6.3e-41 171.4 112 78.6
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 1.1e-40 170.6 111 79.3
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 1.1e-40 170.6 114 74.6
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.1e-40 170.6 106 78.3
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 1.8e-40 169.9 118 72.9
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 1.8e-40 169.9 114 73.7
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 1.8e-40 169.9 109 78.0
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 2.4e-40 169.5 118 73.7
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 2.4e-40 169.5 101 81.2
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 2.4e-40 169.5 120 72.5
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 4.1e-40 168.7 118 72.9
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 4.1e-40 168.7 102 81.4
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 6.9e-40 167.9 120 71.7
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 2.0e-39 166.4 113 71.7
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 2.0e-39 166.4 101 81.2
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 4.5e-39 165.2 143 61.5
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 5.9e-39 164.9 102 79.4
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 2.2e-38 162.9 144 61.8
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 2.9e-38 162.5 114 72.8
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 5.0e-38 161.8 102 76.5
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 1.9e-37 159.8 114 71.9
BcaC02g10904 Brassica carinata HOM05D006938 ORTHO05D008600 4.4e-34 148.7 138 68.1
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 1.7e-33 146.7 177 49.2
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 2.8e-33 146.0 108 64.8
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 1.4e-32 143.7 89 79.8
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 1.8e-32 143.3 122 59.8
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 1.8e-32 143.3 104 66.3
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 3.6e-28 129.0 112 54.5
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 6.1e-28 128.3 69 88.4
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 2.3e-27 126.3 95 68.4
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 7.0e-24 114.8 63 92.1
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 2.7e-20 102.8 93 52.7
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 1.8e-16 90.1 54 81.5
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 1.2e-15 87.4 63 69.8
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 5.9e-15 85.1 74 52.7
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 1.0e-14 84.3 44 90.9
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 6.1e-12 75.1 44 79.5
Sc10g0007050 Simmondsia chinensis HOM05D006938 ORTHO05D008600 1.5e-10 70.5 55 63.6


User provided reference genes

Program Settings