Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g07998 Brassica carinata HOM05D006042 ORTHO05D007658 1.6e-180 636.0 322 100.0
A07p19810 Brassica napus HOM05D006042 ORTHO05D007658 1.9e-152 542.7 329 87.2
BraA07t29682Z Brassica rapa HOM05D006042 ORTHO05D007658 1.0e-142 510.4 287 91.3
BcaC08g44400 Brassica carinata HOM05D006042 ORTHO05D007658 2.8e-140 502.3 289 90.3
C06p18330 Brassica napus HOM05D006042 ORTHO05D007658 6.2e-140 501.1 289 90.0
BolC6t37045H Brassica oleracea HOM05D006042 ORTHO05D007658 6.2e-140 501.1 289 90.0
Sp1g29720 Schrenkiella parvula HOM05D006042 ORTHO05D007658 3.8e-137 491.9 310 84.5
Thhalv10027870m.g Eutrema salsugineum HOM05D006042 ORTHO05D007658 2.0e-130 469.5 289 83.7
AL7G51880 Arabidopsis lyrata HOM05D006042 ORTHO05D007658 4.3e-125 451.8 290 82.8
CARHR214100 Cardamine hirsuta HOM05D006042 ORTHO05D007658 1.5e-122 443.4 290 80.3
Carub.0007s3720 Capsella rubella HOM05D006042 ORTHO05D007658 5.8e-122 441.4 290 81.4
THA.LOC104805550 Tarenaya hassleriana HOM05D006042 ORTHO05D007658 3.8e-113 412.1 291 75.3
AT5G38660 Arabidopsis thaliana HOM05D006042 ORTHO05D007658 1.5e-109 400.2 263 80.2
Aa31LG9G16960 Aethionema arabicum HOM05D006042 ORTHO05D007658 1.9e-104 383.3 290 71.4
Ciclev10012434m.g Citrus clementina HOM05D006042 ORTHO05D007658 3.3e-101 372.5 232 81.5
Manes.02G066700 Manihot esculenta HOM05D006042 ORTHO05D007658 1.3e-97 360.5 231 80.1
Atru.chr8.825 Acer truncatum HOM05D006042 ORTHO05D007658 2.5e-96 356.3 230 77.8
Potri.004G102100 Populus trichocarpa HOM05D006042 ORTHO05D007658 5.5e-96 355.1 229 77.7
Hma1.2p1_0550F.1_g177265 Hydrangea macrophylla HOM05D006042 ORTHO05D007658 7.2e-96 354.8 218 81.7
CANSAT64G1085 Cannabis sativa HOM05D006042 ORTHO05D007658 1.6e-95 353.6 232 78.9
Nitab4.5_0002489g0020 Nicotiana tabacum HOM05D006042 ORTHO05D007658 1.6e-95 353.6 306 63.1
Gohir.A11G162500 Gossypium hirsutum HOM05D006042 ORTHO05D007658 1.0e-94 350.9 237 76.4
Gorai.007G180300 Gossypium raimondii HOM05D006042 ORTHO05D007658 1.0e-94 350.9 228 78.5
Gohir.D11G168732 Gossypium hirsutum HOM05D006042 ORTHO05D007658 1.4e-94 350.5 228 78.1
GSVIVG01036442001 Vitis vinifera HOM05D006042 ORTHO05D007658 1.4e-94 350.5 227 80.2
MD17G1074400 Malus domestica HOM05D006042 ORTHO05D007658 2.3e-94 349.7 225 78.7
Actinidia26288 Actinidia chinensis HOM05D006042 ORTHO05D007658 4.0e-94 349.0 212 83.0
CSS0008868 Camellia sinensis var. sinensis HOM05D006042 ORTHO05D007658 6.7e-94 348.2 219 80.4
Lsat_1_v5_gn_4_153081 Lactuca sativa HOM05D006042 ORTHO05D007658 6.7e-94 348.2 249 72.3
Potri.017G112700 Populus trichocarpa HOM05D006042 ORTHO05D007658 1.1e-93 347.4 227 77.1
Cfa007944 Carpinus fangiana HOM05D006042 ORTHO05D007658 1.5e-93 347.1 249 72.3
CiPaw.03G059800 Carya illinoinensis HOM05D006042 ORTHO05D007658 1.5e-93 347.1 224 79.0
MD09G1084900 Malus domestica HOM05D006042 ORTHO05D007658 2.6e-93 346.3 225 78.2
Nitab4.5_0004721g0010 Nicotiana tabacum HOM05D006042 ORTHO05D007658 2.6e-93 346.3 278 66.9
Ca_30067_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 3.3e-93 345.9 245 72.7
Eucgr.F02481 Eucalyptus grandis HOM05D006042 ORTHO05D007658 7.5e-93 344.7 222 78.4
Oeu030760.1 Olea europaea HOM05D006042 ORTHO05D007658 1.3e-92 344.0 222 79.7
CAN.G995.2 Capsicum annuum HOM05D006042 ORTHO05D007658 2.2e-92 343.2 224 78.1
Prupe.3G239600 Prunus persica HOM05D006042 ORTHO05D007658 2.2e-92 343.2 228 78.5
Duzib138G1312 Durio zibethinus HOM05D006042 ORTHO05D007658 2.8e-92 342.8 227 76.2
ClCG11G005350 Citrullus lanatus HOM05D006042 ORTHO05D007658 4.8e-92 342.0 229 78.6
Thecc.04G137400 Theobroma cacao HOM05D006042 ORTHO05D007658 6.3e-92 341.7 230 74.3
PGSC0003DMG400019582 Solanum tuberosum HOM05D006042 ORTHO05D007658 1.1e-91 340.9 221 77.8
HanXRQChr14g0438681 Helianthus annuus HOM05D006042 ORTHO05D007658 1.8e-91 340.1 235 72.3
Sopen03g006950 Solanum pennellii HOM05D006042 ORTHO05D007658 2.4e-91 339.7 221 77.8
ECA232G3341 Erigeron canadensis HOM05D006042 ORTHO05D007658 7.0e-91 338.2 216 77.8
Lj2g0022623 Lotus japonicus HOM05D006042 ORTHO05D007658 9.1e-91 337.8 228 74.1
Solyc03g034170.4 Solanum lycopersicum HOM05D006042 ORTHO05D007658 9.1e-91 337.8 221 77.4
CsaV3_5G039130 Cucumis sativus L. HOM05D006042 ORTHO05D007658 2.0e-90 336.7 223 78.9
Lalb_Chr06g0174661 Lupinus albus HOM05D006042 ORTHO05D007658 2.7e-90 336.3 224 75.0
Psat1g013000 Pisum sativum HOM05D006042 ORTHO05D007658 2.7e-90 336.3 225 76.4
Migut.H00201 Erythranthe guttata HOM05D006042 ORTHO05D007658 3.5e-90 335.9 233 75.1
FvH4_6g45340 Fragaria vesca HOM05D006042 ORTHO05D007658 4.5e-90 335.5 215 76.7
FAN14G4491 Fragaria x ananassa HOM05D006042 ORTHO05D007658 4.5e-90 335.5 215 76.7
QL02p052540 Quercus lobata HOM05D006042 ORTHO05D007658 4.5e-90 335.5 211 79.1
Aqoxy3G03922 Aquilegia oxysepala HOM05D006042 ORTHO05D007658 7.7e-90 334.7 256 69.5
MSTRG.2747 Avicennia marina HOM05D006042 ORTHO05D007658 7.7e-90 334.7 232 72.4
Cc07_g09000 Coffea canephora HOM05D006042 ORTHO05D007658 7.7e-90 334.7 229 73.8
Glyma.19G045600 Glycine max HOM05D006042 ORTHO05D007658 1.0e-89 334.3 229 73.8
Medtr6g017260 Medicago truncatula HOM05D006042 ORTHO05D007658 1.0e-89 334.3 239 73.2
PGR004G1523 Punica granatum HOM05D006042 ORTHO05D007658 1.0e-89 334.3 222 74.3
TPR.G32447 Trifolium pratense HOM05D006042 ORTHO05D007658 1.3e-89 334.0 227 76.7
ATR0589G121 Amborella trichopoda HOM05D006042 ORTHO05D007658 3.8e-89 332.4 245 69.0
FAN09G0627 Fragaria x ananassa HOM05D006042 ORTHO05D007658 3.8e-89 332.4 215 76.3
DCAR_009854 Daucus carota HOM05D006042 ORTHO05D007658 6.5e-89 331.6 220 77.3
TWI53G1226 Tripterygium wilfordii HOM05D006042 ORTHO05D007658 6.5e-89 331.6 228 72.4
COL.COLO4_16190 Corchorus olitorius HOM05D002377 ORTHO05D007658 1.9e-88 330.1 255 67.8
RcHm_v2.0_Chr2g0163121 Rosa chinensis HOM05D006042 ORTHO05D007658 2.5e-88 329.7 215 75.8
FAN05G0122 Fragaria x ananassa HOM05D006042 ORTHO05D007658 3.2e-88 329.3 214 76.2
MBI09_g41181_MAGBIO Magnolia biondii HOM05D006042 ORTHO05D007658 9.4e-88 327.8 233 73.8
SalBow3G2575 Salvia bowleyana HOM05D006042 ORTHO05D007658 3.6e-87 325.9 223 75.8
SalBow3G3727 Salvia bowleyana HOM05D006042 ORTHO05D007658 3.6e-87 325.9 223 75.8
arahy.Tifrunner.gnm1.ann1.TWH6SW Arachis hypogaea HOM05D006042 ORTHO05D007658 4.7e-87 325.5 204 78.9
Phvul.004G063000 Phaseolus vulgaris HOM05D006042 ORTHO05D007658 1.4e-86 323.9 259 64.9
Os08g0359000 Oryza sativa ssp. japonica HOM05D006042 ORTHO05D007658 1.8e-86 323.6 198 80.3
PSO063G0034 Papaver somniferum HOM05D006042 ORTHO05D007658 3.0e-86 322.8 236 72.5
VMungo0464G1707 Vigna mungo HOM05D006042 ORTHO05D007658 6.8e-86 321.6 241 66.8
Zm00001eb042940 Zea mays HOM05D006042 ORTHO05D007658 1.2e-85 320.9 213 74.6
PSO782G1563 Papaver somniferum HOM05D006042 ORTHO05D007658 1.5e-85 320.5 237 71.7
Sed0018352 Sechium edule HOM05D006042 ORTHO05D007658 1.7e-84 317.0 209 77.5
Hund16127 Selenicereus undatus HOM05D006042 ORTHO05D007658 3.7e-84 315.8 211 73.0
Sc10g0001330 Simmondsia chinensis HOM05D006042 ORTHO05D007658 3.7e-84 315.8 210 72.4
FAN02G0945 Fragaria x ananassa HOM05D006042 ORTHO05D007658 2.2e-81 306.6 214 72.9
Mapoly0019s0052 Marchantia polymorpha HOM05D006042 ORTHO05D007658 6.5e-81 305.1 208 73.6
Rhsim08G0079500 Rhododendron simsii HOM05D006042 ORTHO05D007658 3.2e-80 302.8 244 66.4
SEGI_07967 Sequoiadendron giganteum HOM05D006042 ORTHO05D007658 3.2e-80 302.8 212 71.2
vmacro18106 Vaccinium macrocarpon HOM05D006042 ORTHO05D007658 7.2e-80 301.6 180 82.8
Ca_26178_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 3.6e-79 299.3 208 73.6
HPP92_008047 Vanilla planifolia HOM05D006042 ORTHO05D007658 6.1e-79 298.5 213 69.0
Lj2C447G3 Lonicera japonica HOM05D006042 ORTHO05D007658 8.0e-79 298.1 170 86.5
AUR62014538 Chenopodium quinoa HOM05D006042 ORTHO05D007658 1.8e-78 297.0 186 77.4
Sabra04G0078300 Salix brachista HOM05D006042 ORTHO05D007658 8.8e-78 294.7 322 53.4
AUR62008965 Chenopodium quinoa HOM05D006042 ORTHO05D007658 9.8e-77 291.2 186 75.8
BcaC02g09662 Brassica carinata HOM05D006042 ORTHO05D007658 4.9e-76 288.9 285 61.1
SGA_v2.0_scaffold49G18090 Striga asiatica HOM05D006042 ORTHO05D007658 8.3e-76 288.1 204 72.5
Pp3c4_3720 Physcomitrium patens HOM05D006042 ORTHO05D007658 2.0e-74 283.5 214 65.9
EL10Ac2g04605 Beta vulgaris HOM05D006042 ORTHO05D007658 5.0e-73 278.9 213 68.5
AagrBONN_evm.TU.Sc2ySwM_340.223 Anthoceros agrestis HOM05D000513 ORTHO05D003825 6.6e-73 278.5 188 72.3
arahy.Tifrunner.gnm1.ann1.4I03R9 Arachis hypogaea HOM05D006042 ORTHO05D007658 1.1e-72 277.7 173 77.5
SMO232G0004 Selaginella moellendorffii HOM05D006042 ORTHO05D007658 9.5e-72 274.6 208 66.3
CBR_g44937 Chara braunii HOM05D006042 ORTHO05D007658 6.8e-70 268.5 201 64.2
Hma1.2p1_0550F.1_g177260 Hydrangea macrophylla HOM05D006042 ORTHO05D007658 9.8e-69 264.6 159 83.0
Nn3g17761 Nelumbo nucifera HOM05D006042 ORTHO05D007658 2.9e-68 263.1 247 59.1
CDE09G0042 Ceratophyllum demersum HOM05D006042 ORTHO05D007658 8.3e-68 261.5 287 52.3
Dinv34847 Davidia involucrata HOM05D006042 ORTHO05D007658 3.2e-67 259.6 187 72.2
C04p45290 Brassica napus HOM05D006042 ORTHO05D007658 3.0e-65 253.1 358 47.8
Cpa.g.sc179.22 Carica papaya HOM05D006042 ORTHO05D007658 2.3e-57 226.9 239 52.7
BolC4t26112H Brassica oleracea HOM05D006042 ORTHO05D007658 5.0e-57 225.7 261 54.0
MELO3C022088.2 Cucumis melo HOM05D006042 ORTHO05D007658 5.6e-56 222.2 265 52.8
Peaxi162Scf00751g00624 Petunia axillaris HOM05D006042 ORTHO05D007658 3.9e-49 199.5 121 78.5
PRCOL_00000779 Prasinoderma coloniale HOM05D006042 ORTHO05D007658 1.9e-48 197.2 226 47.3
MBI09_g40289_MAGBIO Magnolia biondii HOM05D006042 ORTHO05D007658 3.6e-47 193.0 134 72.4
MCO16G088 Micromonas commoda HOM05D006042 ORTHO05D007658 4.7e-47 192.6 204 50.5
BolC3t18613H Brassica oleracea HOM05D006042 ORTHO05D032368 2.3e-46 190.3 97 96.9
BolC5t30891H Brassica oleracea HOM05D006042 ORTHO05D007658 1.5e-45 187.6 97 95.9
Cre16.g665250 Chlamydomonas reinhardtii HOM05D006042 ORTHO05D007658 9.9e-45 184.9 196 50.5
TAR278G0002 Trochodendron aralioides HOM05D006042 ORTHO05D007658 2.1e-42 177.2 158 60.1
GSVIVG01026074001 Vitis vinifera HOM05D006042 ORTHO05D007658 4.6e-42 176.0 122 75.4
Haze_14131 Corylus avellana HOM05D006042 ORTHO05D007658 2.8e-31 140.2 112 67.9
unitig_0.g9 Utricularia gibba HOM05D006042 ORTHO05D007658 1.2e-29 134.8 82 79.3
GSVIVG01027526001 Vitis vinifera HOM05D006042 ORTHO05D007658 3.4e-29 133.3 78 83.3
Cpa.g.sc179.23 Carica papaya HOM05D006042 ORTHO05D007658 1.7e-28 131.0 78 79.5
CARHR262580 Cardamine hirsuta HOM05D006042 ORTHO05D007658 2.9e-28 130.2 182 52.2
Haze_14130 Corylus avellana HOM05D006042 ORTHO05D007658 3.2e-27 126.7 76 78.9
BcaC05g29172 Brassica carinata HOM05D006042 ORTHO05D032368 1.9e-19 100.9 50 98.0
C02p54890 Brassica napus HOM05D006042 ORTHO05D032368 2.4e-19 100.5 51 96.1
QL02p057613 Quercus lobata HOM05D006042 ORTHO05D007658 4.3e-16 89.7 61 72.1
Sabra17G0093400 Salix brachista HOM05D006042 ORTHO05D007658 1.3e-15 88.2 78 65.4
Ah.16g101960 Amaranthus hybridus HOM05D000095 ORTHO05D000330 1.5e-13 81.3 53 75.5
Peaxi162Scf00104g00074 Petunia axillaris HOM05D006042 ORTHO05D007658 3.2e-11 73.6 48 68.8
Phvul.004G063400 Phaseolus vulgaris HOM05D002377 ORTHO05D002656 1.8e-09 67.8 55 60.0
unitig_0.g10 Utricularia gibba HOM05D006042 ORTHO05D007658 1.9e-08 64.3 53 64.2
Phvul.004G063200 Phaseolus vulgaris HOM05D002377 ORTHO05D002656 4.3e-08 63.2 47 61.7
Cpa.g.sc179.24 Carica papaya HOM05D006042 ORTHO05D007658 8.2e-07 58.9 41 65.9


User provided reference genes

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