Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g07960 Brassica carinata HOM05D010754 ORTHO05D011439 1.5e-40 169.1 84 100.0
A07p20150 Brassica napus HOM05D010754 ORTHO05D011439 2.4e-35 151.8 87 89.7
BcaC08g44438 Brassica carinata HOM05D010754 ORTHO05D011439 7.0e-35 150.2 87 88.5
C06p18810 Brassica napus HOM05D010754 ORTHO05D011439 7.0e-35 150.2 87 88.5
BolC6t37086H Brassica oleracea HOM05D010754 ORTHO05D011439 7.0e-35 150.2 87 88.5
BraA07t29714Z Brassica rapa HOM05D010754 ORTHO05D011439 1.2e-34 149.4 87 88.5
Carub.0007s3574 Capsella rubella HOM05D010754 ORTHO05D011439 1.2e-15 86.3 74 59.5
AL7G50160 Arabidopsis lyrata HOM05D010754 ORTHO05D011439 3.1e-14 81.6 76 60.5
BcaB05g23053 Brassica carinata HOM05D010754 ORTHO05D011439 5.8e-13 77.4 76 55.3
C04p46500 Brassica napus HOM05D010754 ORTHO05D011439 2.2e-12 75.5 73 56.2
Sp7g02110 Schrenkiella parvula HOM05D010754 ORTHO05D011439 7.8e-10 67.0 81 51.9
CARHR262200 Cardamine hirsuta HOM05D010754 ORTHO05D011439 3.0e-09 65.1 84 48.8
BraA04t16940Z Brassica rapa HOM05D010754 ORTHO05D011439 1.9e-08 62.4 74 51.4
BcaB06g27407 Brassica carinata HOM05D010754 ORTHO05D011439 7.3e-08 60.5 73 53.4
A04p12780 Brassica napus HOM05D010754 ORTHO05D011439 9.6e-08 60.1 74 51.4
CARHR262190 Cardamine hirsuta HOM05D010754 ORTHO05D011439 1.6e-07 59.3 84 46.4
Carub.0002s1398 Capsella rubella HOM05D010754 ORTHO05D011439 8.1e-07 57.0 61 49.2


User provided reference genes

Program Settings