Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g07662 Brassica carinata HOM05D029330 ORTHO05D027092 5.8e-43 177.2 90 100.0
BcaC05g24497 Brassica carinata HOM05D029330 ORTHO05D027092 5.8e-43 177.2 90 100.0
BcaNung04487 Brassica carinata HOM05D029330 ORTHO05D027092 4.3e-22 107.8 54 98.1
C02p31280 Brassica napus HOM05D001346 ORTHO05D014100 3.8e-10 68.2 42 81.0
BolC8t47460H Brassica oleracea HOM05D021299 ORTHO05D014100 4.9e-10 67.8 42 81.0
A06p31300 Brassica napus HOM05D001346 ORTHO05D014100 1.1e-09 66.6 42 78.6
BraA06t26070Z Brassica rapa HOM05D021299 ORTHO05D014100 1.1e-09 66.6 42 78.6
BcaB05g23593 Brassica carinata HOM05D000346 ORTHO05D014100 1.9e-09 65.9 37 86.5
A03p60940 Brassica napus HOM05D001346 ORTHO05D014100 3.2e-09 65.1 42 76.2
A10p05810 Brassica napus HOM05D001346 ORTHO05D014100 3.2e-09 65.1 42 76.2
Thhalv10010241m.g Eutrema salsugineum HOM05D000346 ORTHO05D000326 3.2e-09 65.1 38 84.2
Sp5g06810 Schrenkiella parvula HOM05D000346 ORTHO05D000326 4.2e-09 64.7 38 81.6
BcaC06g35326 Brassica carinata HOM05D000346 ORTHO05D014100 7.1e-09 63.9 37 83.8
BcaC07g39896 Brassica carinata HOM05D000346 ORTHO05D000326 7.1e-09 63.9 38 81.6
C08p31000 Brassica napus HOM05D000346 ORTHO05D000326 7.1e-09 63.9 38 81.6
BolC8t50723H Brassica oleracea HOM05D000346 ORTHO05D000326 7.1e-09 63.9 38 81.6
CARHR165720 Cardamine hirsuta HOM05D000346 ORTHO05D000326 7.1e-09 63.9 38 78.9
BcaB01g00070 Brassica carinata HOM05D000346 ORTHO05D000326 9.3e-09 63.5 38 81.6
BcaC03g17721 Brassica carinata HOM05D000346 ORTHO05D014100 1.6e-08 62.8 38 81.6
C04p16850 Brassica napus HOM05D021299 ORTHO05D014100 1.6e-08 62.8 42 73.8
BolC4t23241H Brassica oleracea HOM05D021299 ORTHO05D014100 1.6e-08 62.8 42 73.8
A09p48660 Brassica napus HOM05D000346 ORTHO05D000326 2.1e-08 62.4 38 78.9
BraA09t40318Z Brassica rapa HOM05D000346 ORTHO05D000326 2.1e-08 62.4 38 78.9
AT3G55660 Arabidopsis thaliana HOM05D000346 ORTHO05D000326 4.6e-08 61.2 33 87.9
AL5G36890 Arabidopsis lyrata HOM05D000346 ORTHO05D000326 1.0e-07 60.1 33 84.8
BcaC03g15456 Brassica carinata HOM05D001346 ORTHO05D014100 6.6e-07 57.4 34 82.4
BcaC07g37209 Brassica carinata HOM05D021299 ORTHO05D014100 8.7e-07 57.0 34 82.4
C08p06160 Brassica napus HOM05D021299 ORTHO05D014100 8.7e-07 57.0 34 82.4
Carub.0005s2242 Capsella rubella HOM05D000346 ORTHO05D000326 8.7e-07 57.0 32 84.4
CARHR237430 Cardamine hirsuta HOM05D000346 ORTHO05D014100 1.1e-06 56.6 34 76.5


User provided reference genes

Program Settings