Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g07621 Brassica carinata HOM05D001925 ORTHO05D005701 2.1e-291 1005.0 517 100.0
BcaB02g07622 Brassica carinata HOM05D001925 ORTHO05D005701 9.9e-289 996.1 529 97.7
BcaC08g44822 Brassica carinata HOM05D001925 ORTHO05D005701 1.1e-271 939.5 529 91.7
C06p24120 Brassica napus HOM05D001925 ORTHO05D005701 1.6e-270 935.6 529 91.5
BolC6t37570H Brassica oleracea HOM05D001925 ORTHO05D005701 1.8e-269 932.2 529 91.1
BraA07t29988Z Brassica rapa HOM05D001925 ORTHO05D005701 3.9e-269 931.0 529 90.9
A07p23240 Brassica napus HOM05D001925 ORTHO05D005701 1.1e-268 929.5 529 91.1
Sp5g05460 Schrenkiella parvula HOM05D001925 ORTHO05D005701 7.9e-246 853.6 531 83.2
AL7G22330 Arabidopsis lyrata HOM05D001925 ORTHO05D005701 6.5e-240 833.9 536 79.5
AT4G29910 Arabidopsis thaliana HOM05D001925 ORTHO05D005701 3.6e-238 828.2 534 79.8
Thhalv10005869m.g Eutrema salsugineum HOM05D001925 ORTHO05D005701 3.3e-236 821.6 537 80.1
CARHR237820 Cardamine hirsuta HOM05D001925 ORTHO05D005701 1.4e-229 799.7 518 80.3
THA.LOC104825846 Tarenaya hassleriana HOM05D001925 ORTHO05D005701 2.2e-211 739.2 542 71.8
Aa31LG2G20640 Aethionema arabicum HOM05D001925 ORTHO05D005701 2.4e-210 735.7 521 73.1
Carub.0007s1073 Capsella rubella HOM05D001925 ORTHO05D005701 1.2e-182 643.7 411 81.8
CiPaw.01G062800 Carya illinoinensis HOM05D001925 ORTHO05D005701 1.2e-177 627.1 543 61.1
QL04p053597 Quercus lobata HOM05D001925 ORTHO05D005701 3.9e-176 622.1 537 60.7
Actinidia10039 Actinidia chinensis HOM05D001925 ORTHO05D005701 1.1e-175 620.5 545 60.6
Duzib138G1334 Durio zibethinus HOM05D001925 ORTHO05D005701 4.7e-174 615.1 538 59.1
Manes.05G033300 Manihot esculenta HOM05D001925 ORTHO05D005701 6.2e-174 614.8 542 60.1
vmacro13268 Vaccinium macrocarpon HOM05D001925 ORTHO05D005701 2.4e-173 612.8 545 58.9
CSS0009302 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D005701 9.0e-173 610.9 546 59.7
CSS0022743 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D005701 9.0e-173 610.9 546 59.7
Haze_15511 Corylus avellana HOM05D001925 ORTHO05D005701 9.0e-173 610.9 543 59.1
Cfa003907 Carpinus fangiana HOM05D001925 ORTHO05D005701 1.5e-172 610.1 543 59.9
Rhsim07G0013900 Rhododendron simsii HOM05D001925 ORTHO05D005701 1.5e-172 610.1 545 59.1
Gohir.A11G089700 Gossypium hirsutum HOM05D001925 ORTHO05D005701 3.4e-172 609.0 539 59.4
Lj6A572T62 Lonicera japonica HOM05D001925 ORTHO05D005701 3.4e-172 609.0 550 58.9
GSVIVG01008477001 Vitis vinifera HOM05D001925 ORTHO05D005701 9.9e-172 607.4 536 59.3
Gorai.007G100400 Gossypium raimondii HOM05D001925 ORTHO05D005701 1.3e-171 607.1 539 58.6
Potri.014G085900 Populus trichocarpa HOM05D001925 ORTHO05D005701 1.7e-171 606.7 542 60.3
CANSAT56G3724 Cannabis sativa HOM05D001925 ORTHO05D005701 4.9e-171 605.1 542 59.0
Lj6A578T43 Lonicera japonica HOM05D001925 ORTHO05D005701 6.4e-171 604.7 550 58.2
Sabra14G0062200 Salix brachista HOM05D001925 ORTHO05D005701 2.4e-170 602.8 542 60.1
Cpa.g.sc11.17 Carica papaya HOM05D001925 ORTHO05D005701 3.2e-170 602.4 542 57.9
Gohir.D11G094000 Gossypium hirsutum HOM05D001925 ORTHO05D005701 3.2e-170 602.4 539 58.4
COL.COLO4_12725 Corchorus olitorius HOM05D001925 ORTHO05D005701 1.6e-169 600.1 539 58.8
Thecc.01G357800 Theobroma cacao HOM05D001925 ORTHO05D005701 6.0e-169 598.2 540 58.5
Ciclev10019660m.g Citrus clementina HOM05D001925 ORTHO05D005701 7.8e-169 597.8 540 58.7
Atru.chr5.509 Acer truncatum HOM05D001925 ORTHO05D005701 3.0e-168 595.9 542 58.5
TAR636G2317 Trochodendron aralioides HOM05D001925 ORTHO05D005701 5.1e-168 595.1 543 57.6
Nn6g33390 Nelumbo nucifera HOM05D001925 ORTHO05D005701 1.1e-167 594.0 548 58.2
MD01G1065000 Malus domestica HOM05D001925 ORTHO05D005701 1.1e-165 587.4 540 55.9
TWI73G0882 Tripterygium wilfordii HOM05D001925 ORTHO05D005701 9.0e-165 584.3 533 57.4
Psat4g001160 Pisum sativum HOM05D001925 ORTHO05D005701 1.5e-164 583.6 544 56.4
Peaxi162Scf00020g00723 Petunia axillaris HOM05D001925 ORTHO05D005701 5.8e-164 581.6 543 57.1
Cc02_g38160 Coffea canephora HOM05D001925 ORTHO05D005701 7.6e-164 581.3 542 58.7
Medtr7g077840 Medicago truncatula HOM05D001925 ORTHO05D005701 7.6e-164 581.3 544 56.2
BcaC07g40027 Brassica carinata HOM05D001925 ORTHO05D005701 9.9e-164 580.9 453 70.6
Migut.B01766 Erythranthe guttata HOM05D001925 ORTHO05D005701 1.7e-163 580.1 540 58.1
RcHm_v2.0_Chr2g0161261 Rosa chinensis HOM05D001925 ORTHO05D005701 2.2e-163 579.7 515 57.5
PGR004G0833 Punica granatum HOM05D001925 ORTHO05D005701 3.8e-163 578.9 545 56.5
arahy.Tifrunner.gnm1.ann1.69YTHK Arachis hypogaea HOM05D001925 ORTHO05D005701 1.4e-162 577.0 543 56.2
MELO3C021204.2 Cucumis melo HOM05D001925 ORTHO05D005701 1.9e-162 576.6 541 57.7
Sed0000605 Sechium edule HOM05D001925 ORTHO05D005701 4.6e-161 572.0 540 56.5
Lj1g0000866 Lotus japonicus HOM05D001925 ORTHO05D005701 6.0e-161 571.6 543 56.4
HanXRQChr04g0121151 Helianthus annuus HOM05D001925 ORTHO05D005701 1.3e-160 570.5 540 56.9
MBI04_g28752_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D005701 1.8e-160 570.1 537 56.1
ClCG06G003620 Citrullus lanatus HOM05D001925 ORTHO05D005701 2.3e-160 569.7 541 56.6
Eucgr.L01587 Eucalyptus grandis HOM05D001925 ORTHO05D005701 2.3e-160 569.7 546 55.9
Ca_07928_v3 Cicer arietinum L. HOM05D001925 ORTHO05D005701 5.1e-160 568.5 540 55.0
CAN.G78.90 Capsicum annuum HOM05D001925 ORTHO05D005701 1.9e-159 566.6 543 55.8
Oeu015817.1 Olea europaea HOM05D001925 ORTHO05D005701 2.5e-159 566.2 545 55.4
Carub.0002s1689 Capsella rubella HOM05D001925 ORTHO05D005701 3.3e-159 565.8 357 82.6
FvH4_7g14490 Fragaria vesca HOM05D001925 ORTHO05D005701 4.3e-159 565.5 516 57.4
SalBow3G0216 Salvia bowleyana HOM05D001925 ORTHO05D005701 4.3e-159 565.5 527 56.9
DCAR_007446 Daucus carota HOM05D001925 ORTHO05D005701 5.6e-159 565.1 539 55.7
RcHm_v2.0_Chr1g0355901 Rosa chinensis HOM05D001925 ORTHO05D005701 7.4e-159 564.7 516 57.2
ECA236G3836 Erigeron canadensis HOM05D001925 ORTHO05D005701 9.6e-159 564.3 532 57.1
Prupe.2G172000 Prunus persica HOM05D001925 ORTHO05D005701 6.2e-158 561.6 503 57.9
arahy.Tifrunner.gnm1.ann1.NC5V2N Arachis hypogaea HOM05D001925 ORTHO05D005701 8.1e-158 561.2 549 55.2
VMungo1383G1901 Vigna mungo HOM05D001925 ORTHO05D005701 2.4e-157 559.7 544 55.0
Nitab4.5_0000583g0200 Nicotiana tabacum HOM05D001925 ORTHO05D005701 1.2e-156 557.4 543 55.6
arahy.Tifrunner.gnm1.ann1.9GVB5D Arachis hypogaea HOM05D001925 ORTHO05D005701 1.5e-156 557.0 549 53.9
Glyma.18G234000 Glycine max HOM05D001925 ORTHO05D005701 2.0e-156 556.6 532 54.1
SGA_v2.0_scaffold4G02302 Striga asiatica HOM05D001925 ORTHO05D005701 5.8e-156 555.1 525 56.6
Phvul.008G061800 Phaseolus vulgaris HOM05D001925 ORTHO05D005701 1.4e-154 550.4 544 54.6
Lj7A511T78 Lonicera japonica HOM05D001925 ORTHO05D005701 3.5e-153 545.8 528 55.3
Eucgr.D01236 Eucalyptus grandis HOM05D001925 ORTHO05D005701 4.6e-153 545.4 537 54.9
PGSC0003DMG400000174 Solanum tuberosum HOM05D001925 ORTHO05D005701 3.9e-152 542.3 543 54.5
Sopen01g038540 Solanum pennellii HOM05D001925 ORTHO05D005701 5.1e-152 542.0 543 54.3
Lsat_1_v5_gn_7_4881 Lactuca sativa HOM05D001925 ORTHO05D005701 3.3e-151 539.3 531 55.7
Solyc01g094760.3 Solanum lycopersicum HOM05D001925 ORTHO05D005701 2.8e-150 536.2 543 53.8
Lalb_Chr13g0304081 Lupinus albus HOM05D001925 ORTHO05D005701 4.8e-150 535.4 532 53.2
EL10Ac1g00402 Beta vulgaris HOM05D001925 ORTHO05D005701 1.4e-149 533.9 545 53.2
FAN03G1293 Fragaria x ananassa HOM05D001925 ORTHO05D005701 1.1e-146 524.2 516 54.8
FAN10G1478 Fragaria x ananassa HOM05D001925 ORTHO05D005701 1.1e-146 524.2 516 55.2
FAN06G1763 Fragaria x ananassa HOM05D001925 ORTHO05D005701 3.2e-146 522.7 516 54.8
FAN10G3665 Fragaria x ananassa HOM05D001925 ORTHO05D005701 3.2e-146 522.7 516 55.2
Aqoxy2G04021 Aquilegia oxysepala HOM05D001925 ORTHO05D005701 9.3e-146 521.2 549 50.6
Hund16654 Selenicereus undatus HOM05D001925 ORTHO05D005701 9.3e-146 521.2 530 52.3
FAN06G3551 Fragaria x ananassa HOM05D001925 ORTHO05D005701 3.5e-145 519.2 516 54.7
Nitab4.5_0006018g0050 Nicotiana tabacum HOM05D001925 ORTHO05D005701 3.9e-144 515.8 516 54.7
TPR.G37845 Trifolium pratense HOM05D001925 ORTHO05D005701 2.5e-143 513.1 542 51.5
FAN01G0375 Fragaria x ananassa HOM05D001925 ORTHO05D005701 4.8e-142 508.8 517 54.0
CDE08G0676 Ceratophyllum demersum HOM05D001925 ORTHO05D005701 1.8e-141 506.9 534 53.0
ATR0068G004 Amborella trichopoda HOM05D001925 ORTHO05D005701 2.4e-141 506.5 521 50.5
Ah.05g180520 Amaranthus hybridus HOM05D001925 ORTHO05D001453 7.6e-140 501.5 531 51.4
PSO384G0118 Papaver somniferum HOM05D001925 ORTHO05D005701 3.2e-138 496.1 502 54.4
Glyma.09G258700 Glycine max HOM05D001925 ORTHO05D005701 3.9e-136 489.2 544 49.1
Dinv43827 Davidia involucrata HOM05D001925 ORTHO05D005701 1.9e-135 486.9 414 58.7
AUR62004371 Chenopodium quinoa HOM05D001925 ORTHO05D005701 1.8e-133 480.3 538 48.9
AUR62022580 Chenopodium quinoa HOM05D001925 ORTHO05D005701 4.5e-132 475.7 540 49.4
Sc01g0003490 Simmondsia chinensis HOM05D001925 ORTHO05D005701 1.4e-125 454.1 424 56.1
CsaV3_6G000620 Cucumis sativus L. HOM05D001925 ORTHO05D005701 9.1e-125 451.4 417 57.1
C08p32440 Brassica napus HOM05D001925 ORTHO05D005701 8.5e-123 444.9 485 55.1
BolC8t50859H Brassica oleracea HOM05D001925 ORTHO05D005701 2.5e-122 443.4 485 55.1
Zm00001eb214490 Zea mays HOM05D001925 ORTHO05D005701 1.4e-117 427.6 537 46.0
Os03g0759500 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D005701 5.0e-115 419.1 498 47.0
SEGI_03119 Sequoiadendron giganteum HOM05D001925 ORTHO05D005701 2.6e-103 380.2 573 39.1
PSO339G3045 Papaver somniferum HOM05D001925 ORTHO05D005701 1.3e-99 367.9 483 44.9
arahy.Tifrunner.gnm1.ann1.IR4EKV Arachis hypogaea HOM05D001925 ORTHO05D005701 3.6e-97 359.8 322 59.9
arahy.Tifrunner.gnm1.ann1.SID920 Arachis hypogaea HOM05D001925 ORTHO05D005701 8.0e-97 358.6 416 50.2
Oeu050467.2 Olea europaea HOM05D001925 ORTHO05D005701 1.2e-95 354.8 536 41.4
SMO147G0283 Selaginella moellendorffii HOM05D001925 ORTHO05D005701 2.0e-95 354.0 515 40.0
AagrBONN_evm.TU.Sc2ySwM_368.2511 Anthoceros agrestis HOM05D001925 ORTHO05D005701 2.8e-89 333.6 483 41.0
HPP92_019868 Vanilla planifolia HOM05D001925 ORTHO05D005701 3.4e-87 326.6 359 50.7
Pp3c17_13600 Physcomitrium patens HOM05D001925 ORTHO05D005701 5.0e-83 312.8 519 38.0
Mapoly0177s0008 Marchantia polymorpha HOM05D001925 ORTHO05D005701 3.4e-79 300.1 481 39.7
arahy.Tifrunner.gnm1.ann1.D25PMP Arachis hypogaea HOM05D001925 ORTHO05D005701 5.8e-79 299.3 423 42.8
ECA236G4017 Erigeron canadensis HOM05D001925 ORTHO05D005701 7.5e-79 298.9 309 53.1
Potri.001G135975 Populus trichocarpa HOM05D001925 ORTHO05D005701 2.5e-74 283.9 263 55.1
MD07G1135400 Malus domestica HOM05D001925 ORTHO05D005701 2.1e-68 264.2 348 45.7
TPR.G26686 Trifolium pratense HOM05D001925 ORTHO05D005701 6.0e-60 236.1 266 48.1
arahy.Tifrunner.gnm1.ann1.IM3547 Arachis hypogaea HOM05D001925 ORTHO05D005701 3.4e-55 220.3 203 56.7
BraA09t40455Z Brassica rapa HOM05D001925 ORTHO05D005701 1.3e-54 218.4 342 44.7
arahy.Tifrunner.gnm1.ann1.FEJ64N Arachis hypogaea HOM05D001925 ORTHO05D005701 2.2e-54 217.6 210 54.3
Actinidia20895 Actinidia chinensis HOM05D001925 ORTHO05D005701 3.3e-50 203.8 167 57.5
C06p24140 Brassica napus HOM05D001925 ORTHO05D005701 5.6e-42 176.4 113 84.1
BcaC08g44824 Brassica carinata HOM05D001925 ORTHO05D005701 9.0e-40 169.1 115 80.0
A09p50030 Brassica napus HOM05D001925 ORTHO05D005701 2.3e-35 154.5 108 74.1
A09p50040 Brassica napus HOM05D001925 ORTHO05D005701 2.5e-34 151.0 89 88.8
FvH4_2g10060 Fragaria vesca HOM05D001925 ORTHO05D005701 4.5e-31 140.2 205 42.4
Zm00001eb057980 Zea mays HOM05D001925 ORTHO05D005701 4.9e-30 136.7 438 28.5
MCO11G226 Micromonas commoda HOM05D001925 ORTHO05D005701 1.9e-29 134.8 590 24.7
TPR.G16202 Trifolium pratense HOM05D001925 ORTHO05D005701 1.8e-27 128.3 126 55.6
CBR_g58810 Chara braunii HOM05D001925 ORTHO05D005701 5.7e-26 123.2 548 27.2
Thhalv10027287m.g Eutrema salsugineum HOM05D001925 ORTHO05D005701 2.4e-24 117.9 86 69.8
Dinv43826 Davidia involucrata HOM05D001925 ORTHO05D005701 3.4e-23 114.0 116 56.0
FAN24G1219 Fragaria x ananassa HOM05D001925 ORTHO05D005701 7.9e-20 102.8 108 54.6
C09p49930 Brassica napus HOM05D001925 ORTHO05D039571 1.8e-19 101.7 123 56.1
PRCOL_00005952 Prasinoderma coloniale HOM05D001925 ORTHO05D005701 2.5e-18 97.8 504 24.0
FvH4_2g10061 Fragaria vesca HOM05D001925 ORTHO05D005701 9.1e-16 89.4 100 53.0
FAN15G3430 Fragaria x ananassa HOM05D001925 ORTHO05D005701 2.6e-15 87.8 107 49.5
arahy.Tifrunner.gnm1.ann1.ZHBQ27 Arachis hypogaea HOM05D002506 ORTHO05D002879 1.7e-14 85.1 91 53.8
MBI04_g47116_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D005701 1.9e-13 81.6 155 34.8
BcaC07g40074 Brassica carinata HOM05D001925 ORTHO05D005701 1.5e-10 72.0 77 62.3
Cre07.g355200 Chlamydomonas reinhardtii HOM05D001925 ORTHO05D005701 4.8e-09 67.0 457 23.2


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