Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g07569 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-89 333.2 152 100.0
BcaB01g01663 Brassica carinata HOM05D003839 ORTHO05D003352 2.8e-82 308.5 152 91.4
BcaB06g26196 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-77 292.7 152 87.5
BcaB04g18348 Brassica carinata HOM05D003839 ORTHO05D003352 4.6e-77 291.2 152 86.8
BcaB02g06777 Brassica carinata HOM05D003839 ORTHO05D003352 5.6e-75 284.3 152 86.8
C09p23320 Brassica napus HOM05D003839 ORTHO05D003352 6.5e-47 191.0 152 59.2
BcaC06g33695 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-46 189.9 152 58.6
C03p63070 Brassica napus HOM05D003839 ORTHO05D003352 1.9e-46 189.5 152 59.2
C03p63060 Brassica napus HOM05D003839 ORTHO05D003352 5.5e-46 188.0 152 58.6
BolC8t48491H Brassica oleracea HOM05D003839 ORTHO05D003352 5.5e-46 188.0 152 58.6
BraA01t02749Z Brassica rapa HOM05D003839 ORTHO05D003352 2.7e-45 185.7 149 61.1
BcaC05g27601 Brassica carinata HOM05D003839 ORTHO05D003352 7.9e-45 184.1 152 58.6
C05p35870 Brassica napus HOM05D003839 ORTHO05D003352 7.9e-45 184.1 152 58.6
BolC6t38134H Brassica oleracea HOM05D003839 ORTHO05D003352 1.8e-44 183.0 152 58.6
BcaC05g29109 Brassica carinata HOM05D003839 ORTHO05D003352 2.3e-44 182.6 152 58.6
C05p53370 Brassica napus HOM05D003839 ORTHO05D003352 2.3e-44 182.6 152 58.6
BolC5t32306H Brassica oleracea HOM05D003839 ORTHO05D003352 2.3e-44 182.6 152 57.9
C04p41030 Brassica napus HOM05D003839 ORTHO05D003352 3.9e-44 181.8 152 56.6
BolC4t25686H Brassica oleracea HOM05D003839 ORTHO05D003352 3.9e-44 181.8 152 56.6
BraA02t07902Z Brassica rapa HOM05D003839 ORTHO05D003352 3.9e-44 181.8 152 58.6
BcaB05g23505 Brassica carinata HOM05D003839 ORTHO05D003352 5.2e-44 181.4 147 56.5
BcaC09g50233 Brassica carinata HOM05D003839 ORTHO05D003352 5.2e-44 181.4 145 59.3
C05p53340 Brassica napus HOM05D003839 ORTHO05D003352 6.7e-44 181.0 152 57.9
BcaB08g35818 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-43 179.9 152 57.2
BcaB07g32710 Brassica carinata HOM05D003839 ORTHO05D003352 2.0e-43 179.5 147 57.8
BcaC03g15184 Brassica carinata HOM05D003839 ORTHO05D003352 4.4e-43 178.3 152 56.6
A02p28670 Brassica napus HOM05D003839 ORTHO05D003352 1.3e-42 176.8 152 57.9
BcaB01g00514 Brassica carinata HOM05D003839 ORTHO05D003352 6.3e-42 174.5 148 56.1
C02p27640 Brassica napus HOM05D003839 ORTHO05D003352 1.8e-41 172.9 135 60.0
BolC5t34007H Brassica oleracea HOM05D003839 ORTHO05D003352 4.1e-41 171.8 154 55.8
BcaB01g01517 Brassica carinata HOM05D003839 ORTHO05D003352 9.1e-41 170.6 148 56.1
BcaC04g22104 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-39 166.0 152 54.6
BcaC06g36011 Brassica carinata HOM05D003839 ORTHO05D003352 4.2e-38 161.8 152 52.6
C09p49180 Brassica napus HOM05D003839 ORTHO05D003352 2.7e-37 159.1 152 51.3
BolC9t57767H Brassica oleracea HOM05D003839 ORTHO05D003352 5.2e-36 154.8 152 50.7
A05p21290 Brassica napus HOM05D003839 ORTHO05D003352 8.8e-36 154.1 146 51.4
BraA05t21037Z Brassica rapa HOM05D003839 ORTHO05D003352 8.8e-36 154.1 146 51.4
C02p27160 Brassica napus HOM05D003839 ORTHO05D003352 4.4e-35 151.8 151 49.0
BolC2t09048H Brassica oleracea HOM05D003839 ORTHO05D003352 9.7e-35 150.6 152 48.7
BraA01t03014Z Brassica rapa HOM05D003839 ORTHO05D003352 3.1e-33 145.6 116 57.8
A05p17610 Brassica napus HOM05D003839 ORTHO05D003352 5.9e-32 141.4 116 56.0
BcaB04g17113 Brassica carinata HOM05D003839 ORTHO05D003352 1.0e-31 140.6 147 46.3
BcaB07g32949 Brassica carinata HOM05D003839 ORTHO05D003352 6.5e-31 137.9 147 44.9
BcaB06g27258 Brassica carinata HOM05D003839 ORTHO05D003352 8.5e-31 137.5 147 44.9
BcaB03g16839 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-30 136.7 147 44.2
BcaB03g16489 Brassica carinata HOM05D003839 ORTHO05D003352 7.2e-30 134.4 147 44.2
BcaB07g32609 Brassica carinata HOM05D003839 ORTHO05D003352 7.2e-30 134.4 147 44.2
BraA01t02837Z Brassica rapa HOM05D003839 ORTHO05D003352 7.2e-30 134.4 100 62.0
A05p21770 Brassica napus HOM05D003839 ORTHO05D003352 4.7e-29 131.7 93 65.6
BraA05t21098Z Brassica rapa HOM05D003839 ORTHO05D003352 4.7e-29 131.7 93 65.6
BcaB01g02875 Brassica carinata HOM05D003839 ORTHO05D003352 1.0e-28 130.6 147 42.9
BcaC03g17189 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-28 130.2 100 62.0
BcaB06g26804 Brassica carinata HOM05D003839 ORTHO05D003352 7.5e-27 124.4 93 63.4
BcaB01g00721 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-26 123.2 134 44.8
BcaC01g02162 Brassica carinata HOM05D003839 ORTHO05D003352 3.7e-26 122.1 142 40.1
BraA08t34532Z Brassica rapa HOM05D003839 ORTHO05D003352 1.6e-24 116.7 146 39.0
BolC3t20345H Brassica oleracea HOM05D003839 ORTHO05D003352 3.5e-24 115.5 130 43.8
A09p19700 Brassica napus HOM05D003839 ORTHO05D003352 4.5e-24 115.2 139 39.6
BcaB04g17572 Brassica carinata HOM05D003839 ORTHO05D003352 1.0e-23 114.0 95 57.9
BraA02t07279Z Brassica rapa HOM05D003839 ORTHO05D003352 1.0e-23 114.0 133 41.4
C09p21410 Brassica napus HOM05D003839 ORTHO05D003352 1.3e-23 113.6 139 38.8
BcaB08g35221 Brassica carinata HOM05D003839 ORTHO05D003352 2.9e-23 112.5 141 36.2
A03p67960 Brassica napus HOM05D003839 ORTHO05D003352 3.8e-23 112.1 139 38.8
BcaC03g15389 Brassica carinata HOM05D003839 ORTHO05D003352 8.5e-23 110.9 146 37.0
BcaC03g16634 Brassica carinata HOM05D003839 ORTHO05D003352 8.5e-23 110.9 146 37.0
A09p20270 Brassica napus HOM05D003839 ORTHO05D003352 1.1e-22 110.5 139 37.4
BolC7t43565H Brassica oleracea HOM05D003839 ORTHO05D003352 1.5e-22 110.2 146 37.0
BraA07t28801Z Brassica rapa HOM05D003839 ORTHO05D003352 1.9e-22 109.8 139 37.4
Thhalv10005441m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 2.1e-21 106.3 141 39.7
BcaB07g31374 Brassica carinata HOM05D003839 ORTHO05D003352 3.6e-21 105.5 138 37.7
C06p50270 Brassica napus HOM05D003839 ORTHO05D003352 6.1e-21 104.8 145 33.8
A05p03580 Brassica napus HOM05D003839 ORTHO05D003352 8.0e-21 104.4 146 36.3
C04p33340 Brassica napus HOM05D003839 ORTHO05D003352 8.0e-21 104.4 145 33.8
BcaC03g17190 Brassica carinata HOM05D003839 ORTHO05D003352 4.0e-20 102.1 77 64.9
C05p17950 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-19 100.5 136 34.6
Thhalv10005434m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.2e-19 100.5 137 35.0
Thhalv10002164m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 2.0e-19 99.8 120 40.8
BcaB02g06630 Brassica carinata HOM05D003839 ORTHO05D003352 4.4e-19 98.6 135 35.6
BraA09t40513Z Brassica rapa HOM05D003839 ORTHO05D003352 7.5e-19 97.8 139 32.4
BcaB04g16904 Brassica carinata HOM05D008292 ORTHO05D003352 9.8e-19 97.4 145 32.4
BcaB06g26117 Brassica carinata HOM05D003839 ORTHO05D003352 9.8e-19 97.4 92 47.8
C08p34220 Brassica napus HOM05D003839 ORTHO05D003352 2.8e-18 95.9 136 38.2
BcaB05g24307 Brassica carinata HOM05D003839 ORTHO05D003352 3.7e-18 95.5 135 34.8
BolC8t51019H Brassica oleracea HOM05D003839 ORTHO05D003352 4.9e-18 95.1 136 38.2
C07p34600 Brassica napus HOM05D009411 ORTHO05D014997 1.4e-17 93.6 140 34.3
BolC7t43992H Brassica oleracea HOM05D009411 ORTHO05D014997 1.4e-17 93.6 140 34.3
A01p17040 Brassica napus HOM05D008292 ORTHO05D003352 1.8e-17 93.2 139 33.1
A01p36380 Brassica napus HOM05D003839 ORTHO05D003352 1.8e-17 93.2 134 34.3
A04p07260 Brassica napus HOM05D003839 ORTHO05D003352 1.8e-17 93.2 72 62.5
BolC9t55562H Brassica oleracea HOM05D009411 ORTHO05D014997 1.8e-17 93.2 137 35.0
BraA04t16421Z Brassica rapa HOM05D003839 ORTHO05D003352 1.8e-17 93.2 72 62.5
BraA09t39508Z Brassica rapa HOM05D008292 ORTHO05D003352 1.8e-17 93.2 139 33.1
BcaC04g21847 Brassica carinata HOM05D009411 ORTHO05D014997 3.1e-17 92.4 136 35.3
Thhalv10003316m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 3.1e-17 92.4 94 43.6
C09p26700 Brassica napus HOM05D009411 ORTHO05D014997 4.1e-17 92.0 136 35.3
AT5G17167 Arabidopsis thaliana HOM05D003839 ORTHO05D003352 5.4e-17 91.7 137 30.7
BcaB05g23784 Brassica carinata HOM05D003839 ORTHO05D003352 5.4e-17 91.7 94 46.8
BcaB05g23330 Brassica carinata HOM05D003839 ORTHO05D003352 9.2e-17 90.9 81 58.0
C02p24590 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-16 90.5 99 42.4
C09p33270 Brassica napus HOM05D008292 ORTHO05D003352 1.6e-16 90.1 139 32.4
BolC9t56163H Brassica oleracea HOM05D008292 ORTHO05D003352 1.6e-16 90.1 139 32.4
A06p31440 Brassica napus HOM05D008292 ORTHO05D003352 2.0e-16 89.7 149 28.2
A09p40840 Brassica napus HOM05D008292 ORTHO05D003352 2.0e-16 89.7 149 28.2
BcaB01g00999 Brassica carinata HOM05D008292 ORTHO05D003352 7.8e-16 87.8 122 35.2
BcaC04g22280 Brassica carinata HOM05D003839 ORTHO05D003352 7.8e-16 87.8 139 33.8
AL8G28420 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 1.3e-15 87.0 129 34.9
BraA02t07568Z Brassica rapa HOM05D008292 ORTHO05D003352 2.3e-15 86.3 96 41.7
AL4G17890 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 3.8e-15 85.5 129 34.9
BcaB07g31055 Brassica carinata HOM05D003839 ORTHO05D003352 3.8e-15 85.5 69 60.9
BcaC06g36055 Brassica carinata HOM05D008292 ORTHO05D003352 8.6e-15 84.3 138 28.3
BcaC08g44791 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-14 83.6 93 43.0
C02p44490 Brassica napus HOM05D003839 ORTHO05D003352 1.9e-14 83.2 106 37.7
C03p32250 Brassica napus HOM05D008292 ORTHO05D003352 1.9e-14 83.2 145 27.6
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-14 82.8 132 31.8
C06p24070 Brassica napus HOM05D018430 ORTHO05D020143 2.5e-14 82.8 114 34.2
C07p08430 Brassica napus HOM05D008292 ORTHO05D003352 2.5e-14 82.8 145 26.9
BolC5t32063H Brassica oleracea HOM05D000313 ORTHO05D000065 2.5e-14 82.8 132 31.8
BcaC05g25843 Brassica carinata HOM05D003839 ORTHO05D003352 3.3e-14 82.4 136 30.9
A09p32650 Brassica napus HOM05D003839 ORTHO05D003352 4.3e-14 82.0 72 56.9
A03p53810 Brassica napus HOM05D000357 ORTHO05D000242 7.3e-14 81.3 102 36.3
BcaNung02469 Brassica carinata HOM05D003839 ORTHO05D003352 9.5e-14 80.9 108 36.1
C07p40670 Brassica napus HOM05D003839 ORTHO05D003352 9.5e-14 80.9 108 36.1
BcaB04g17896 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-13 80.5 113 36.3
A03p53820 Brassica napus HOM05D000943 ORTHO05D002475 1.2e-13 80.5 135 34.1
BcaNung06308 Brassica carinata HOM05D008292 ORTHO05D003352 1.6e-13 80.1 145 26.9
Thhalv10002269m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 4.7e-13 78.6 88 37.5
BcaC02g10611 Brassica carinata HOM05D003839 ORTHO05D003352 2.3e-12 76.3 97 41.2
C04p18360 Brassica napus HOM05D003839 ORTHO05D003352 2.3e-12 76.3 94 39.4
C02p23500 Brassica napus HOM05D010997 ORTHO05D014498 1.2e-11 73.9 142 32.4
BolC1t05558H Brassica oleracea HOM05D009411 ORTHO05D014997 1.5e-11 73.6 133 33.1
Thhalv10003388m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 3.4e-11 72.4 81 40.7
A03p67260 Brassica napus HOM05D003839 ORTHO05D003352 5.7e-11 71.6 52 63.5
C03p67990 Brassica napus HOM05D003839 ORTHO05D003352 5.7e-11 71.6 70 45.7
BcaB04g17804 Brassica carinata HOM05D003839 ORTHO05D003352 7.5e-11 71.2 92 33.7
BraA09t36993Z Brassica rapa HOM05D010997 ORTHO05D014498 2.2e-10 69.7 142 31.7
BcaC07g37399 Brassica carinata HOM05D008292 ORTHO05D003352 2.9e-10 69.3 149 24.2
Thhalv10002917m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 2.9e-10 69.3 75 45.3
BolC6t35618H Brassica oleracea HOM05D003839 ORTHO05D003352 4.9e-10 68.6 71 46.5
BcaC09g47930 Brassica carinata HOM05D008292 ORTHO05D003352 8.3e-10 67.8 146 24.7
BcaB01g00779 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-09 66.2 78 38.5
BcaC08g44872 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-09 66.2 131 29.8
BcaB05g23319 Brassica carinata HOM05D003839 ORTHO05D003352 5.4e-09 65.1 70 41.4
BcaC01g01423 Brassica carinata HOM05D003839 ORTHO05D003352 5.4e-09 65.1 78 35.9
BcaC07g41300 Brassica carinata HOM05D008292 ORTHO05D003352 5.4e-09 65.1 109 28.4
C03p91870 Brassica napus HOM05D003839 ORTHO05D003352 5.4e-09 65.1 78 35.9
C05p11490 Brassica napus HOM05D010997 ORTHO05D014498 5.4e-09 65.1 153 30.1
BolC3t21507H Brassica oleracea HOM05D003839 ORTHO05D003352 5.4e-09 65.1 78 35.9
C07p23690 Brassica napus HOM05D010997 ORTHO05D014498 7.0e-09 64.7 142 31.0
BolC2t10492H Brassica oleracea HOM05D003839 ORTHO05D003352 7.0e-09 64.7 71 45.1
A09p52190 Brassica napus HOM05D010997 ORTHO05D014498 1.2e-08 63.9 141 30.5
C07p29940 Brassica napus HOM05D003839 ORTHO05D003352 1.6e-08 63.5 74 44.6
AT2G35280 Arabidopsis thaliana HOM05D008292 ORTHO05D003352 2.0e-08 63.2 76 35.5
A05p20350 Brassica napus HOM05D003839 ORTHO05D003352 2.0e-08 63.2 52 55.8
C05p32830 Brassica napus HOM05D003839 ORTHO05D003352 2.7e-08 62.8 62 48.4
C08p08700 Brassica napus HOM05D000096 ORTHO05D000045 3.5e-08 62.4 74 41.9
C04p25750 Brassica napus HOM05D003839 ORTHO05D003352 4.6e-08 62.0 72 44.4
BolC3t15567H Brassica oleracea HOM05D008292 ORTHO05D003352 4.6e-08 62.0 77 35.1
BolC5t34000H Brassica oleracea HOM05D003839 ORTHO05D003352 7.8e-08 61.2 76 43.4
BolC3t19025H Brassica oleracea HOM05D003839 ORTHO05D003352 1.0e-07 60.8 54 50.0
BolC4t24234H Brassica oleracea HOM05D003839 ORTHO05D003352 1.3e-07 60.5 72 43.1
BcaB04g18557 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-07 60.1 73 42.5
BcaB05g21582 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-07 60.1 73 42.5
BcaC05g25845 Brassica carinata HOM05D003839 ORTHO05D003352 3.9e-07 58.9 79 35.4
BolC8t47715H Brassica oleracea HOM05D008292 ORTHO05D003352 6.6e-07 58.2 76 32.9
BraA08t34531Z Brassica rapa HOM05D008292 ORTHO05D003352 6.6e-07 58.2 86 31.4
BcaC03g17703 Brassica carinata HOM05D008292 ORTHO05D003352 8.6e-07 57.8 86 31.4
BolC2t11778H Brassica oleracea HOM05D008292 ORTHO05D003352 8.6e-07 57.8 86 31.4
CARHR101890 Cardamine hirsuta HOM05D008292 ORTHO05D003352 8.6e-07 57.8 76 35.5
BcaB06g27469 Brassica carinata HOM05D003839 ORTHO05D003352 1.9e-06 56.6 24 100.0
A05p32880 Brassica napus HOM05D008292 ORTHO05D003352 2.5e-06 56.2 142 22.5
BraA05t22695Z Brassica rapa HOM05D008292 ORTHO05D003352 2.5e-06 56.2 142 22.5
BolC2t11209H Brassica oleracea HOM05D003839 ORTHO05D003352 4.3e-06 55.5 30 76.7
BolC2t12326H Brassica oleracea HOM05D008292 ORTHO05D003352 7.3e-06 54.7 86 30.2
BolC6t39088H Brassica oleracea HOM05D008292 ORTHO05D003352 7.3e-06 54.7 72 31.9
BcaB05g23090 Brassica carinata HOM05D003839 ORTHO05D032372 9.5e-06 54.3 51 51.0
BcaC03g15888 Brassica carinata HOM05D008292 ORTHO05D003352 9.5e-06 54.3 67 40.3
BcaC07g38083 Brassica carinata HOM05D003839 ORTHO05D003352 9.5e-06 54.3 28 78.6
C03p19740 Brassica napus HOM05D008292 ORTHO05D003352 9.5e-06 54.3 142 22.5
BraA05t20816Z Brassica rapa HOM05D003839 ORTHO05D020172 9.5e-06 54.3 94 35.1


User provided reference genes

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