Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g07535 Brassica carinata HOM05D019895 ORTHO05D019895 9.6e-237 823.2 432 100.0
BcaB05g23955 Brassica carinata HOM05D019895 ORTHO05D019895 1.5e-218 762.7 444 89.4
BcaB07g31032 Brassica carinata HOM05D003240 ORTHO05D019895 8.8e-65 251.9 222 63.5
C05p62330 Brassica napus HOM05D003240 ORTHO05D019895 5.2e-57 226.1 210 70.5
BcaC06g35455 Brassica carinata HOM05D012417 ORTHO05D024193 4.1e-38 163.3 167 56.9
BcaC04g24027 Brassica carinata HOM05D012417 ORTHO05D024193 9.2e-38 162.2 179 62.6
C03p21650 Brassica napus HOM05D012417 ORTHO05D024193 1.2e-37 161.8 168 57.1
BolC3t14549H Brassica oleracea HOM05D012417 ORTHO05D024193 1.2e-37 161.8 168 57.1
BcaC03g13399 Brassica carinata HOM05D012417 ORTHO05D024193 5.0e-36 156.4 179 60.3
BolC2t08371H Brassica oleracea HOM05D019895 ORTHO05D027678 4.3e-35 153.3 116 67.2
C09p19240 Brassica napus HOM05D019895 ORTHO05D027678 7.3e-35 152.5 116 71.6
BolC1t00828H Brassica oleracea HOM05D010232 ORTHO05D016018 4.7e-34 149.8 126 65.9
A08p22750 Brassica napus HOM05D010232 ORTHO05D016018 1.2e-32 145.2 125 64.0
BraA08t34244Z Brassica rapa HOM05D010232 ORTHO05D016018 1.2e-32 145.2 125 64.0
A09p34350 Brassica napus HOM05D019895 ORTHO05D027678 2.0e-32 144.4 112 69.6
BcaC05g27248 Brassica carinata HOM05D010232 ORTHO05D023893 3.4e-32 143.7 115 70.4
C01p08510 Brassica napus HOM05D010232 ORTHO05D016018 7.5e-32 142.5 126 63.5
BcaC03g14777 Brassica carinata HOM05D019895 ORTHO05D027678 9.8e-32 142.1 140 56.4
C09p34960 Brassica napus HOM05D010232 ORTHO05D016018 2.2e-31 141.0 126 62.7
BraA06t25169Z Brassica rapa HOM05D012417 ORTHO05D041300 6.4e-31 139.4 270 43.7
BcaB02g08739 Brassica carinata HOM05D010232 ORTHO05D023893 3.2e-30 137.1 127 63.0
BcaC07g39648 Brassica carinata HOM05D003240 ORTHO05D095172 4.6e-29 133.3 82 82.9
BcaC08g43321 Brassica carinata HOM05D010232 ORTHO05D023893 6.0e-29 132.9 116 65.5
C01p08460 Brassica napus HOM05D010232 ORTHO05D016018 1.0e-28 132.1 128 60.2
BcaB04g21282 Brassica carinata HOM05D010232 ORTHO05D016018 4.3e-27 126.7 116 62.1
BcaC09g51848 Brassica carinata HOM05D010232 ORTHO05D016018 4.7e-26 123.2 126 57.1
A08p33410 Brassica napus HOM05D003240 ORTHO05D017535 4.4e-24 116.7 126 56.3
BraA03t12219Z Brassica rapa HOM05D003240 ORTHO05D017535 4.4e-24 116.7 126 56.3
C07p30560 Brassica napus HOM05D003240 ORTHO05D039579 6.4e-23 112.8 133 53.4
BcaC02g12116 Brassica carinata HOM05D003240 ORTHO05D039579 1.1e-22 112.1 129 53.5
BraA09t36164Z Brassica rapa HOM05D012445 ORTHO05D018631 1.4e-22 111.7 113 61.1
BraA03t13996Z Brassica rapa HOM05D012445 ORTHO05D018631 3.2e-22 110.5 111 61.3
BraA04t17515Z Brassica rapa HOM05D012445 ORTHO05D018631 1.0e-20 105.5 113 59.3
BraA02t08299Z Brassica rapa HOM05D002233 ORTHO05D002299 3.0e-20 104.0 105 61.0
BolC4t27983H Brassica oleracea HOM05D008956 ORTHO05D013254 1.1e-19 102.1 126 51.6
BcaC08g43240 Brassica carinata HOM05D013416 ORTHO05D024230 1.5e-19 101.7 132 50.0
C02p13230 Brassica napus HOM05D012417 ORTHO05D041300 1.5e-19 101.7 142 55.6
BolC6t36746H Brassica oleracea HOM05D012445 ORTHO05D040835 1.9e-19 101.3 113 55.8
C09p16440 Brassica napus HOM05D012445 ORTHO05D040835 2.5e-19 100.9 113 56.6
BcaC06g33773 Brassica carinata HOM05D013416 ORTHO05D024230 3.3e-19 100.5 132 53.0
C06p50180 Brassica napus HOM05D003240 ORTHO05D017535 4.3e-19 100.1 121 53.7
BolC1t00874H Brassica oleracea HOM05D003240 ORTHO05D023867 4.3e-19 100.1 124 51.6
A08p21510 Brassica napus HOM05D003240 ORTHO05D016738 9.6e-19 99.0 127 54.3
BolC6t40058H Brassica oleracea HOM05D003240 ORTHO05D017535 9.6e-19 99.0 121 53.7
BraA08t34100Z Brassica rapa HOM05D003240 ORTHO05D016738 9.6e-19 99.0 127 54.3
C03p51870 Brassica napus HOM05D012445 ORTHO05D018631 1.6e-18 98.2 113 54.9
C08p03380 Brassica napus HOM05D008956 ORTHO05D016720 4.7e-18 96.7 134 47.8
A09p34340 Brassica napus HOM05D012417 ORTHO05D019895 6.2e-18 96.3 107 66.4
BraA09t38980Z Brassica rapa HOM05D012417 ORTHO05D019895 6.2e-18 96.3 107 66.4
C08p00720 Brassica napus HOM05D003240 ORTHO05D016738 8.1e-18 95.9 99 57.6
C01p00460 Brassica napus HOM05D003240 ORTHO05D016738 1.4e-17 95.1 127 52.0
C09p63070 Brassica napus HOM05D003240 ORTHO05D023867 1.4e-17 95.1 124 49.2
BcaC02g08188 Brassica carinata HOM05D003240 ORTHO05D017535 3.1e-17 94.0 111 55.0
BcaC07g39783 Brassica carinata HOM05D003240 ORTHO05D023867 3.1e-17 94.0 124 50.8
C04p57490 Brassica napus HOM05D003240 ORTHO05D017535 3.1e-17 94.0 111 55.0
BcaC08g47278 Brassica carinata HOM05D003240 ORTHO05D017535 4.0e-17 93.6 110 53.6
C07p46390 Brassica napus HOM05D003240 ORTHO05D016738 4.0e-17 93.6 118 53.4
BolC7t45157H Brassica oleracea HOM05D003240 ORTHO05D016738 4.0e-17 93.6 118 53.4
BcaC05g26272 Brassica carinata HOM05D003240 ORTHO05D032928 8.9e-17 92.4 103 56.3
C03p56700 Brassica napus HOM05D003240 ORTHO05D016738 8.9e-17 92.4 123 52.8
BolC3t17954H Brassica oleracea HOM05D003240 ORTHO05D016738 8.9e-17 92.4 123 52.8
BcaC06g32208 Brassica carinata HOM05D003240 ORTHO05D021783 1.2e-16 92.0 116 50.9
BcaC09g47943 Brassica carinata HOM05D003240 ORTHO05D021783 1.2e-16 92.0 116 50.9
BolC8t51497H Brassica oleracea HOM05D003240 ORTHO05D016738 1.2e-16 92.0 127 52.0
BcaC06g31611 Brassica carinata HOM05D003240 ORTHO05D091789 1.5e-16 91.7 97 58.8
BolC3t12902H Brassica oleracea HOM05D008956 ORTHO05D013254 1.5e-16 91.7 126 48.4
A09p39950 Brassica napus HOM05D003240 ORTHO05D021783 2.0e-16 91.3 116 52.6
C03p75630 Brassica napus HOM05D008956 ORTHO05D013254 2.0e-16 91.3 127 48.0
C06p08310 Brassica napus HOM05D008956 ORTHO05D016720 4.4e-16 90.1 121 47.9
BolC2t08368H Brassica oleracea HOM05D012417 ORTHO05D019895 4.4e-16 90.1 107 62.6
BolC6t39347H Brassica oleracea HOM05D012445 ORTHO05D041381 4.4e-16 90.1 103 54.4
C06p40860 Brassica napus HOM05D012445 ORTHO05D041381 5.8e-16 89.7 103 54.4
BraA08t34218Z Brassica rapa HOM05D010893 ORTHO05D016035 1.7e-15 88.2 95 56.8
BcaB01g05158 Brassica carinata HOM05D010893 ORTHO05D016035 2.2e-15 87.8 95 56.8
C03p09920 Brassica napus HOM05D010893 ORTHO05D016035 2.2e-15 87.8 131 48.9
BraA02t06360Z Brassica rapa HOM05D008956 ORTHO05D013254 2.2e-15 87.8 127 45.7
C08p07080 Brassica napus HOM05D010893 ORTHO05D016035 3.8e-15 87.0 131 48.1
BolC8t47552H Brassica oleracea HOM05D010893 ORTHO05D016035 3.8e-15 87.0 131 48.1
BcaC02g07870 Brassica carinata HOM05D010893 ORTHO05D016035 4.9e-15 86.7 131 47.3
C07p48040 Brassica napus HOM05D011346 ORTHO05D015475 4.9e-15 86.7 114 55.3
BraA04t18895Z Brassica rapa HOM05D010893 ORTHO05D039094 4.9e-15 86.7 96 54.2
A10p20120 Brassica napus HOM05D003240 ORTHO05D032928 6.4e-15 86.3 103 55.3
BraA03t10651Z Brassica rapa HOM05D003240 ORTHO05D032928 6.4e-15 86.3 103 55.3
BraA03t14966Z Brassica rapa HOM05D008956 ORTHO05D016720 1.1e-14 85.5 121 47.9
C09p65770 Brassica napus HOM05D008956 ORTHO05D013254 1.4e-14 85.1 117 49.6
BolC9t59399H Brassica oleracea HOM05D008956 ORTHO05D105535 1.4e-14 85.1 117 49.6
C06p44710 Brassica napus HOM05D003240 ORTHO05D017503 3.2e-14 84.0 100 53.0
C07p36910 Brassica napus HOM05D008956 ORTHO05D013254 4.2e-14 83.6 105 53.3
BolC4t25249H Brassica oleracea HOM05D003240 ORTHO05D104461 4.2e-14 83.6 100 54.0
BolC7t44203H Brassica oleracea HOM05D008956 ORTHO05D013254 4.2e-14 83.6 105 53.3
BcaC08g47238 Brassica carinata HOM05D010893 ORTHO05D032352 5.4e-14 83.2 131 47.3
C03p03630 Brassica napus HOM05D008956 ORTHO05D013254 5.4e-14 83.2 126 46.8
BcaNung03344 Brassica carinata HOM05D003240 ORTHO05D017535 1.2e-13 82.0 110 48.2
C09p01740 Brassica napus HOM05D003240 ORTHO05D021783 1.2e-13 82.0 116 47.4
BcaB01g01362 Brassica carinata HOM05D009754 ORTHO05D020043 2.1e-13 81.3 120 46.7
A09p11060 Brassica napus HOM05D003240 ORTHO05D019881 2.7e-13 80.9 127 45.7
BraA03t12127Z Brassica rapa HOM05D003240 ORTHO05D019967 3.5e-13 80.5 89 55.1
C03p42360 Brassica napus HOM05D008956 ORTHO05D013254 7.8e-13 79.3 118 46.6
C06p51070 Brassica napus HOM05D011346 ORTHO05D015475 7.8e-13 79.3 93 59.1
BcaC08g43497 Brassica carinata HOM05D003240 ORTHO05D017503 1.0e-12 79.0 100 52.0
BcaNung00147 Brassica carinata HOM05D003240 ORTHO05D019881 1.0e-12 79.0 126 41.3
C06p39900 Brassica napus HOM05D008956 ORTHO05D101413 1.0e-12 79.0 103 50.5
BcaC06g32745 Brassica carinata HOM05D009754 ORTHO05D020043 3.9e-12 77.0 96 55.2
C04p69810 Brassica napus HOM05D011346 ORTHO05D099510 3.9e-12 77.0 93 58.1
BcaB08g36836 Brassica carinata HOM05D008956 ORTHO05D090626 5.1e-12 76.6 116 44.8
BolC1t01225H Brassica oleracea HOM05D011346 ORTHO05D015475 5.1e-12 76.6 93 57.0
A06p33010 Brassica napus HOM05D003240 ORTHO05D098331 6.6e-12 76.3 82 57.3
BolC6t39565H Brassica oleracea HOM05D008956 ORTHO05D013254 6.6e-12 76.3 96 54.2
BolC9t53578H Brassica oleracea HOM05D011346 ORTHO05D043120 6.6e-12 76.3 93 58.1
C04p03050 Brassica napus HOM05D011346 ORTHO05D015475 8.7e-12 75.9 93 57.0
BolC4t21947H Brassica oleracea HOM05D011346 ORTHO05D015475 8.7e-12 75.9 93 57.0
BNapus_Darmor_BZH_scaffold_109p00210 Brassica napus HOM05D011346 ORTHO05D015475 1.9e-11 74.7 93 54.8
BcaB03g13577 Brassica carinata HOM05D017424 ORTHO05D032352 2.5e-11 74.3 118 45.8
BcaNung03688 Brassica carinata HOM05D003240 ORTHO05D019881 2.5e-11 74.3 127 40.9
BraA08t34184Z Brassica rapa HOM05D009754 ORTHO05D020043 2.5e-11 74.3 96 53.1
BraA09t39506Z Brassica rapa HOM05D011346 ORTHO05D043120 2.5e-11 74.3 93 54.8
BraA10t43860Z Brassica rapa HOM05D009754 ORTHO05D020043 2.5e-11 74.3 96 54.2
C01p15510 Brassica napus HOM05D003240 ORTHO05D103301 3.3e-11 73.9 127 48.0
C06p45070 Brassica napus HOM05D008956 ORTHO05D013254 3.3e-11 73.9 95 53.7
C02p29070 Brassica napus HOM05D009754 ORTHO05D020043 4.3e-11 73.6 96 53.1
C06p44540 Brassica napus HOM05D009754 ORTHO05D027209 4.3e-11 73.6 122 45.9
C07p01490 Brassica napus HOM05D010928 ORTHO05D016821 7.3e-11 72.8 129 43.4
BcaC07g38101 Brassica carinata HOM05D009754 ORTHO05D027209 9.6e-11 72.4 122 45.9
C07p57580 Brassica napus HOM05D010928 ORTHO05D016821 9.6e-11 72.4 129 42.6
BolC8t49585H Brassica oleracea HOM05D003240 ORTHO05D024027 9.6e-11 72.4 130 41.5
C01p00010 Brassica napus HOM05D010928 ORTHO05D016821 1.6e-10 71.6 113 45.1
BcaB01g03865 Brassica carinata HOM05D003240 ORTHO05D094508 2.8e-10 70.9 102 49.0
BcaB03g14123 Brassica carinata HOM05D010928 ORTHO05D090945 2.8e-10 70.9 114 43.0
BcaC05g26508 Brassica carinata HOM05D003240 ORTHO05D023867 2.8e-10 70.9 95 52.6
BcaC07g42699 Brassica carinata HOM05D010928 ORTHO05D090478 2.8e-10 70.9 114 43.0
BcaNung03034 Brassica carinata HOM05D010928 ORTHO05D094015 2.8e-10 70.9 114 43.0
BolC5t31284H Brassica oleracea HOM05D003240 ORTHO05D023867 2.8e-10 70.9 95 52.6
BolC1t05880H Brassica oleracea HOM05D003240 ORTHO05D024027 4.8e-10 70.1 130 41.5
BraA02t06117Z Brassica rapa HOM05D003240 ORTHO05D019881 6.2e-10 69.7 127 44.9
BolC3t12674H Brassica oleracea HOM05D010928 ORTHO05D016821 8.1e-10 69.3 118 44.1
BolC5t28988H Brassica oleracea HOM05D010928 ORTHO05D016821 1.1e-09 68.9 114 44.7
C07p35510 Brassica napus HOM05D008956 ORTHO05D016720 1.4e-09 68.6 95 48.4
BolC7t44074H Brassica oleracea HOM05D008956 ORTHO05D016720 1.4e-09 68.6 95 48.4
BraA01t01392Z Brassica rapa HOM05D011346 ORTHO05D015475 1.4e-09 68.6 89 55.1
BcaC04g18681 Brassica carinata HOM05D009754 ORTHO05D027209 1.8e-09 68.2 122 44.3
BcaNung01267 Brassica carinata HOM05D003240 ORTHO05D016738 1.8e-09 68.2 135 45.2
BraA01t00731Z Brassica rapa HOM05D010928 ORTHO05D016821 2.4e-09 67.8 114 44.7
A03p59560 Brassica napus HOM05D010948 ORTHO05D013805 3.1e-09 67.4 96 49.0
C01p08410 Brassica napus HOM05D010232 ORTHO05D016018 3.1e-09 67.4 60 61.7
BolC1t00824H Brassica oleracea HOM05D010232 ORTHO05D016018 3.1e-09 67.4 60 61.7
BcaB02g07983 Brassica carinata HOM05D003240 ORTHO05D017503 4.0e-09 67.0 85 54.1
BcaC03g17878 Brassica carinata HOM05D010928 ORTHO05D016821 9.0e-09 65.9 118 44.1
C07p62190 Brassica napus HOM05D003240 ORTHO05D019881 9.0e-09 65.9 127 42.5
BolC7t45517H Brassica oleracea HOM05D010928 ORTHO05D016821 9.0e-09 65.9 114 43.9
BcaC07g36928 Brassica carinata HOM05D003240 ORTHO05D024027 1.2e-08 65.5 105 47.6
C01p20310 Brassica napus HOM05D002197 ORTHO05D002462 1.2e-08 65.5 80 57.5
BcaB01g05924 Brassica carinata HOM05D010948 ORTHO05D013805 1.5e-08 65.1 96 44.8
BcaC06g33134 Brassica carinata HOM05D003240 ORTHO05D094083 2.0e-08 64.7 99 45.5
BcaC02g11293 Brassica carinata HOM05D008956 ORTHO05D013254 3.4e-08 63.9 86 51.2
A07p28660 Brassica napus HOM05D010948 ORTHO05D013805 3.4e-08 63.9 96 46.9
BolC4t25181H Brassica oleracea HOM05D003240 ORTHO05D107020 3.4e-08 63.9 122 41.8
BolC5t31661H Brassica oleracea HOM05D010893 ORTHO05D032720 3.4e-08 63.9 63 61.9
C09p73110 Brassica napus HOM05D003240 ORTHO05D040560 4.4e-08 63.5 62 64.5
C03p92080 Brassica napus HOM05D003240 ORTHO05D024027 5.8e-08 63.2 122 41.0
BraA01t00344Z Brassica rapa HOM05D010928 ORTHO05D016821 5.8e-08 63.2 118 41.5
BcaB03g11771 Brassica carinata HOM05D010928 ORTHO05D091924 7.6e-08 62.8 116 42.2
BcaB07g33645 Brassica carinata HOM05D010893 ORTHO05D014123 9.9e-08 62.4 109 44.0
C04p67930 Brassica napus HOM05D008956 ORTHO05D098482 9.9e-08 62.4 75 53.3
BcaC08g46504 Brassica carinata HOM05D009754 ORTHO05D027209 1.3e-07 62.0 122 43.4
BolC3t17473H Brassica oleracea HOM05D012445 ORTHO05D018631 1.3e-07 62.0 82 48.8
BcaC03g18230 Brassica carinata HOM05D003240 ORTHO05D024027 2.9e-07 60.8 123 42.3
C02p62990 Brassica napus HOM05D003240 ORTHO05D042544 2.9e-07 60.8 123 42.3
BolC2t12373H Brassica oleracea HOM05D003240 ORTHO05D042544 2.9e-07 60.8 123 42.3
BcaC08g44168 Brassica carinata HOM05D010928 ORTHO05D093445 3.8e-07 60.5 116 41.4
BcaC01g01758 Brassica carinata HOM05D003240 ORTHO05D032152 6.4e-07 59.7 128 39.8
BolC5t29061H Brassica oleracea HOM05D010893 ORTHO05D032720 8.4e-07 59.3 63 58.7
C09p56640 Brassica napus HOM05D003240 ORTHO05D103622 1.9e-06 58.2 71 54.9
C06p08520 Brassica napus HOM05D011346 ORTHO05D015475 3.2e-06 57.4 93 48.4
BolC2t10052H Brassica oleracea HOM05D011556 ORTHO05D014123 3.2e-06 57.4 90 45.6
C04p72720 Brassica napus HOM05D009754 ORTHO05D014123 4.2e-06 57.0 104 41.3


User provided reference genes

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