Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g07471 Brassica carinata HOM05D006283 ORTHO05D007727 2.5e-192 675.2 333 100.0
BcaC08g44981 Brassica carinata HOM05D006283 ORTHO05D007727 2.0e-149 532.7 271 94.8
BraA07t30108Z Brassica rapa HOM05D006283 ORTHO05D007727 9.0e-134 480.7 256 92.2
A07p24630 Brassica napus HOM05D006283 ORTHO05D007727 7.6e-133 477.6 256 91.0
C06p26110 Brassica napus HOM05D006283 ORTHO05D007727 1.3e-132 476.9 256 91.0
Sp5g03750 Schrenkiella parvula HOM05D006283 ORTHO05D007727 3.8e-132 475.3 256 91.0
BolC6t37776H Brassica oleracea HOM05D006283 ORTHO05D007727 8.4e-132 474.2 256 91.0
AL5G41290 Arabidopsis lyrata HOM05D006283 ORTHO05D007727 6.9e-126 454.5 256 86.3
CARHR169780 Cardamine hirsuta HOM05D006283 ORTHO05D007727 1.2e-125 453.8 256 85.5
Thhalv10006168m.g Eutrema salsugineum HOM05D006283 ORTHO05D007727 1.2e-125 453.8 253 87.4
AT3G59390 Arabidopsis thaliana HOM05D006283 ORTHO05D007727 4.2e-123 445.3 257 85.6
Carub.0005s2613 Capsella rubella HOM05D006283 ORTHO05D007727 2.8e-119 432.6 257 81.7
Aa31LG10G13740 Aethionema arabicum HOM05D006283 ORTHO05D007727 2.7e-114 416.0 253 79.1
THA.LOC104803704 Tarenaya hassleriana HOM05D006283 ORTHO05D007727 7.9e-114 414.5 256 78.9
COL.COLO4_07661 Corchorus olitorius HOM05D006283 ORTHO05D007727 7.7e-101 371.3 242 70.2
Duzib151G0050 Durio zibethinus HOM05D006283 ORTHO05D007727 2.2e-100 369.8 294 61.6
Manes.11G120300 Manihot esculenta HOM05D006283 ORTHO05D007727 5.5e-99 365.2 256 68.0
Atru.chr3.1494 Acer truncatum HOM05D006283 ORTHO05D007727 3.0e-97 359.4 256 67.2
CiPaw.02G054900 Carya illinoinensis HOM05D006283 ORTHO05D007727 1.1e-96 357.5 234 72.2
Ciclev10021635m.g Citrus clementina HOM05D006283 ORTHO05D007727 1.5e-96 357.1 256 67.2
CANSAT78G1066 Cannabis sativa HOM05D006283 ORTHO05D007727 9.7e-96 354.4 256 66.8
Prupe.1G192800 Prunus persica HOM05D006283 ORTHO05D007727 4.8e-95 352.1 256 66.4
Oeu034461.3 Olea europaea HOM05D006283 ORTHO05D007727 8.2e-95 351.3 247 66.0
Dinv22729 Davidia involucrata HOM05D006283 ORTHO05D007727 1.8e-94 350.1 250 66.4
Gohir.A10G137000 Gossypium hirsutum HOM05D006283 ORTHO05D007727 1.8e-94 350.1 232 69.0
Gohir.D10G129700 Gossypium hirsutum HOM05D006283 ORTHO05D007727 5.3e-94 348.6 258 64.3
Gorai.011G143000 Gossypium raimondii HOM05D006283 ORTHO05D007727 5.3e-94 348.6 258 64.3
MD04G1040100 Malus domestica HOM05D006283 ORTHO05D007727 9.1e-94 347.8 256 66.0
Thecc.04G180000 Theobroma cacao HOM05D006283 ORTHO05D007727 9.1e-94 347.8 258 65.5
Cc03_g13090 Coffea canephora HOM05D006283 ORTHO05D007727 1.2e-93 347.4 253 64.4
Potri.019G051300 Populus trichocarpa HOM05D006283 ORTHO05D007727 1.2e-93 347.4 232 69.8
Hma1.2p1_0847F.1_g227833 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 1.6e-93 347.1 229 69.4
Peaxi162Scf00126g00015 Petunia axillaris HOM05D006283 ORTHO05D007727 1.7e-92 343.6 244 65.6
TWI15G0224 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 2.2e-92 343.2 244 63.5
TWI15G1054 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 2.2e-92 343.2 244 63.5
RcHm_v2.0_Chr4g0406391 Rosa chinensis HOM05D006283 ORTHO05D007727 2.9e-92 342.8 235 66.4
Actinidia35975 Actinidia chinensis HOM05D006283 ORTHO05D007727 1.1e-91 340.9 236 69.1
Eucgr.H00372 Eucalyptus grandis HOM05D006283 ORTHO05D007727 1.1e-91 340.9 256 63.7
TAR362G0864 Trochodendron aralioides HOM05D006283 ORTHO05D007727 1.1e-91 340.9 245 64.9
Migut.N02075 Erythranthe guttata HOM05D006283 ORTHO05D007727 9.4e-91 337.8 259 62.2
FvH4_4g10770 Fragaria vesca HOM05D006283 ORTHO05D007727 2.7e-90 336.3 253 62.8
Ca_20784_v3 Cicer arietinum L. HOM05D006283 ORTHO05D007727 4.7e-90 335.5 233 66.5
PGR142G0689 Punica granatum HOM05D006283 ORTHO05D007727 8.0e-90 334.7 252 65.1
MELO3C017715.2 Cucumis melo HOM05D006283 ORTHO05D007727 1.0e-89 334.3 224 67.4
CsaV3_4G003450 Cucumis sativus L. HOM05D006283 ORTHO05D007727 1.8e-89 333.6 224 67.4
VMungo1127G0333 Vigna mungo HOM05D006283 ORTHO05D007727 3.0e-89 332.8 218 70.2
Glyma.11G127900 Glycine max HOM05D006283 ORTHO05D007727 4.0e-89 332.4 247 64.8
Nitab4.5_0000130g0340 Nicotiana tabacum HOM05D006283 ORTHO05D007727 8.8e-89 331.3 256 62.1
TPR.G34200 Trifolium pratense HOM05D006283 ORTHO05D007727 8.8e-89 331.3 233 66.1
arahy.Tifrunner.gnm1.ann1.9EYB94 Arachis hypogaea HOM05D006283 ORTHO05D007727 2.0e-88 330.1 281 59.1
MSTRG.9766 Avicennia marina HOM05D006283 ORTHO05D007727 2.0e-88 330.1 237 65.0
Actinidia34602 Actinidia chinensis HOM05D006283 ORTHO05D007727 7.5e-88 328.2 236 67.8
Medtr4g067140 Medicago truncatula HOM05D006283 ORTHO05D007727 2.2e-87 326.6 233 65.2
GSVIVG01010753001 Vitis vinifera HOM05D006283 ORTHO05D007727 2.2e-87 326.6 256 63.7
Lsat_1_v5_gn_4_30241 Lactuca sativa HOM05D006283 ORTHO05D007727 6.3e-87 325.1 243 62.6
PSO017G4585 Papaver somniferum HOM05D006283 ORTHO05D007727 1.4e-86 323.9 231 65.4
Phvul.011G054600 Phaseolus vulgaris HOM05D006283 ORTHO05D007727 1.4e-86 323.9 244 62.3
arahy.Tifrunner.gnm1.ann1.7GR0QN Arachis hypogaea HOM05D006283 ORTHO05D007727 2.4e-86 323.2 296 56.1
Lj3g0020373 Lotus japonicus HOM05D006283 ORTHO05D007727 2.4e-86 323.2 219 68.9
Sed0010312 Sechium edule HOM05D006283 ORTHO05D007727 2.4e-86 323.2 256 59.0
SalBow3G2028 Salvia bowleyana HOM05D006283 ORTHO05D007727 3.1e-86 322.8 236 63.1
HanXRQChr16g0525531 Helianthus annuus HOM05D006283 ORTHO05D007727 7.0e-86 321.6 226 65.9
PSO675G6362 Papaver somniferum HOM05D006283 ORTHO05D007727 7.0e-86 321.6 252 61.9
Nn1g09881 Nelumbo nucifera HOM05D006283 ORTHO05D007727 2.7e-85 319.7 251 62.5
Sopen06g019520 Solanum pennellii HOM05D006283 ORTHO05D007727 2.7e-85 319.7 247 61.9
Solyc06g054450.3 Solanum lycopersicum HOM05D006283 ORTHO05D007727 4.5e-85 318.9 241 63.1
ECA234G3618 Erigeron canadensis HOM05D006283 ORTHO05D007727 1.3e-84 317.4 218 67.4
Lalb_Chr01g0003171 Lupinus albus HOM05D006283 ORTHO05D007727 1.7e-84 317.0 231 64.1
FAN12G2405 Fragaria x ananassa HOM05D006283 ORTHO05D007727 2.2e-84 316.6 252 59.5
Sed0022341 Sechium edule HOM05D006283 ORTHO05D007727 2.2e-84 316.6 243 61.7
CAN.G1247.5 Capsicum annuum HOM05D006283 ORTHO05D007727 1.1e-83 314.3 237 62.4
DCAR_029916 Daucus carota HOM05D006283 ORTHO05D007727 1.1e-83 314.3 254 57.9
Aqoxy2G04092 Aquilegia oxysepala HOM05D006283 ORTHO05D007727 1.5e-83 313.9 217 66.4
Haze_01514 Corylus avellana HOM05D006283 ORTHO05D007727 1.5e-83 313.9 291 55.7
Rhsim09G0027900 Rhododendron simsii HOM05D006283 ORTHO05D007727 1.9e-83 313.5 254 60.6
CDE08G0087 Ceratophyllum demersum HOM05D006283 ORTHO05D007727 2.1e-82 310.1 242 60.7
EL10Ac3g05930 Beta vulgaris HOM05D006283 ORTHO05D007727 2.7e-82 309.7 267 56.6
Lalb_Chr03g0026141 Lupinus albus HOM05D006283 ORTHO05D007727 8.8e-81 304.7 234 60.3
Sc13g0006800 Simmondsia chinensis HOM05D006283 ORTHO05D007727 3.7e-79 299.3 271 55.0
HPP92_009172 Vanilla planifolia HOM05D006283 ORTHO05D007727 5.4e-78 295.4 235 57.9
Zm00001eb406800 Zea mays HOM05D006283 ORTHO05D007727 1.3e-76 290.8 254 55.5
SGA_v2.0_scaffold12G06158 Striga asiatica HOM05D006283 ORTHO05D007727 1.4e-73 280.8 293 51.2
PGSC0003DMG400030791 Solanum tuberosum HOM05D006283 ORTHO05D007727 1.8e-73 280.4 191 66.5
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 1.2e-72 277.7 192 65.6
unitig_747.g21679 Utricularia gibba HOM05D006283 ORTHO05D007727 1.3e-71 274.2 230 55.7
AUR62002299 Chenopodium quinoa HOM05D006283 ORTHO05D007727 1.9e-67 260.4 183 64.5
Glyma.12G052600 Glycine max HOM05D006283 ORTHO05D007727 1.3e-63 247.7 191 63.9
QL10p048744 Quercus lobata HOM05D006283 ORTHO05D007727 2.2e-63 246.9 163 72.4
Hund12011 Selenicereus undatus HOM05D006283 ORTHO05D007727 3.5e-61 239.6 198 58.1
Pp3c25_2030 Physcomitrium patens HOM05D006283 ORTHO05D007727 4.6e-61 239.2 206 53.9
Sabra19G0057300 Salix brachista HOM05D006283 ORTHO05D007727 1.0e-60 238.0 171 65.5
Duzib268G1109 Durio zibethinus HOM05D006283 ORTHO05D007727 2.6e-56 223.4 158 65.2
Mapoly0093s0081 Marchantia polymorpha HOM05D006283 ORTHO05D007727 2.6e-56 223.4 204 49.0
Lj3A196G22 Lonicera japonica HOM05D006283 ORTHO05D007727 7.5e-56 221.9 136 70.6
SMO119G0098 Selaginella moellendorffii HOM05D006283 ORTHO05D007727 1.6e-53 214.2 235 44.3
SEGI_31631 Sequoiadendron giganteum HOM05D006283 ORTHO05D007727 4.4e-48 196.1 160 55.0
ATR0824G015 Amborella trichopoda HOM05D006283 ORTHO05D007727 1.7e-47 194.1 164 59.1
RcHm_v2.0_Chr4g0406831 Rosa chinensis HOM05D006283 ORTHO05D007727 3.7e-47 193.0 149 56.4
Hma1.2p1_0639F.1_g194055 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 1.1e-46 191.4 133 67.7
Hma1.2p1_0847F.1_g227840 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 1.1e-46 191.4 133 67.7
FAN12G0556 Fragaria x ananassa HOM05D006283 ORTHO05D007727 4.6e-45 186.0 129 61.2
FAN07G2518 Fragaria x ananassa HOM05D006283 ORTHO05D007727 3.0e-44 183.3 138 63.8
Prupe.1G193700 Prunus persica HOM05D006283 ORTHO05D007727 3.4e-32 143.3 103 63.1
Cre16.g673841 Chlamydomonas reinhardtii HOM05D006283 ORTHO05D007727 3.9e-28 129.8 204 35.3
QL10p048749 Quercus lobata HOM05D006283 ORTHO05D007727 1.6e-26 124.4 95 63.2
ClCG07G015660 Citrullus lanatus HOM05D006283 ORTHO05D007727 2.1e-26 124.0 244 37.7
Psat7g091240 Pisum sativum HOM05D006283 ORTHO05D007727 4.5e-24 116.3 154 42.2
vmacro00624 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 2.3e-20 104.0 113 48.7
C09p49630 Brassica napus HOM05D006283 ORTHO05D007727 4.0e-17 93.2 59 76.3
BolC3t18408H Brassica oleracea HOM05D006283 ORTHO05D007727 6.9e-17 92.4 53 83.0
Hma1.2p1_0639F.1_g194050 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 3.8e-15 86.7 44 84.1
Hma1.2p1_0847F.1_g227839 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 3.8e-15 86.7 44 84.1
vmacro00625 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 1.1e-14 85.1 60 68.3
Os11g0267100 Oryza sativa ssp. japonica HOM05D006283 ORTHO05D007727 1.8e-12 77.8 59 59.3
BcaC02g08202 Brassica carinata HOM05D000127 ORTHO05D000243 5.1e-12 76.3 38 89.5
PRCOL_00001858 Prasinoderma coloniale HOM05D006283 ORTHO05D007727 3.3e-11 73.6 146 28.1
Peaxi162Scf00126g00003 Petunia axillaris HOM05D006283 ORTHO05D007727 5.3e-09 66.2 94 40.4
Cfa015166 Carpinus fangiana HOM05D006283 ORTHO05D007727 1.5e-08 64.7 41 73.2
CSS0010514 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 2.9e-07 60.5 38 71.1
CSS0034877 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 2.9e-07 60.5 38 71.1
CSS0026672 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 3.8e-07 60.1 75 44.0
CSS0022675 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 1.4e-06 58.2 87 37.9
Lj3A196T13 Lonicera japonica HOM05D006283 ORTHO05D007727 1.4e-06 58.2 78 41.0
RcHm_v2.0_Chr4g0406821 Rosa chinensis HOM05D006283 ORTHO05D007727 9.3e-06 55.5 45 60.0


User provided reference genes

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