Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g07276 Brassica carinata HOM05D004738 ORTHO05D006439 2.9e-260 901.4 458 100.0
BraA07t30308Z Brassica rapa HOM05D004738 ORTHO05D006439 2.6e-240 835.1 462 90.0
BcaC08g45309 Brassica carinata HOM05D004738 ORTHO05D006439 5.4e-238 827.4 462 89.4
BolC6t38077H Brassica oleracea HOM05D004738 ORTHO05D006439 5.4e-238 827.4 462 89.4
Sp5g35430 Schrenkiella parvula HOM05D004738 ORTHO05D006439 2.0e-224 782.3 459 83.7
Thhalv10018540m.g Eutrema salsugineum HOM05D004738 ORTHO05D006439 7.6e-224 780.4 458 83.6
BraA07t32032Z Brassica rapa HOM05D004738 ORTHO05D006439 1.3e-220 769.6 460 83.5
C06p29130 Brassica napus HOM05D004738 ORTHO05D006439 1.7e-220 769.2 460 84.3
A07p26650 Brassica napus HOM05D004738 ORTHO05D006439 3.9e-220 768.1 460 84.1
C06p54140 Brassica napus HOM05D004738 ORTHO05D006439 6.6e-220 767.3 460 83.0
BcaB02g08689 Brassica carinata HOM05D004738 ORTHO05D006439 1.1e-219 766.5 463 83.2
BcaC08g47585 Brassica carinata HOM05D004738 ORTHO05D006439 1.9e-219 765.8 460 82.8
CARHR074130 Cardamine hirsuta HOM05D004738 ORTHO05D006439 8.1e-218 760.4 456 81.1
BraA02t07352Z Brassica rapa HOM05D004738 ORTHO05D006439 5.2e-217 757.7 464 83.0
BolC2t09746H Brassica oleracea HOM05D004738 ORTHO05D006439 3.4e-216 755.0 468 82.1
A02p23600 Brassica napus HOM05D004738 ORTHO05D006439 5.8e-216 754.2 464 82.5
C02p37360 Brassica napus HOM05D004738 ORTHO05D006439 7.6e-216 753.8 467 82.2
A07p45280 Brassica napus HOM05D004738 ORTHO05D006439 1.4e-214 749.6 460 82.2
BolC6t40426H Brassica oleracea HOM05D004738 ORTHO05D006439 1.4e-214 749.6 491 77.6
Carub.0002s2719 Capsella rubella HOM05D004738 ORTHO05D006439 3.9e-212 741.5 459 79.3
AL2G41120 Arabidopsis lyrata HOM05D004738 ORTHO05D006439 1.9e-211 739.2 460 80.0
Aa31LG4G650 Aethionema arabicum HOM05D004738 ORTHO05D006439 6.2e-202 707.6 466 73.0
BcaB05g25272 Brassica carinata HOM05D004738 ORTHO05D006439 6.2e-202 707.6 375 92.3
THA.LOC104808210 Tarenaya hassleriana HOM05D004738 ORTHO05D006439 7.1e-198 694.1 463 74.5
THA.LOC104812476 Tarenaya hassleriana HOM05D004738 ORTHO05D006439 5.3e-193 677.9 460 72.0
CiPaw.02G152800 Carya illinoinensis HOM05D004738 ORTHO05D006439 3.1e-177 625.5 371 79.0
COL.COLO4_02957 Corchorus olitorius HOM05D004738 ORTHO05D006439 4.2e-174 615.1 349 81.1
Duzib235G1168 Durio zibethinus HOM05D004738 ORTHO05D006439 4.6e-173 611.7 385 74.8
Gohir.A02G122900 Gossypium hirsutum HOM05D004738 ORTHO05D006439 3.9e-172 608.6 375 75.7
Thecc.06G081700 Theobroma cacao HOM05D004738 ORTHO05D006439 6.7e-172 607.8 450 66.2
Gorai.002G058000 Gossypium raimondii HOM05D004738 ORTHO05D006439 2.6e-171 605.9 375 75.5
CsaV3_7G032950 Cucumis sativus L. HOM05D004738 ORTHO05D006439 4.4e-171 605.1 380 73.7
Gohir.D03G073500 Gossypium hirsutum HOM05D004738 ORTHO05D006439 7.4e-171 604.4 375 75.5
Cfa002046 Carpinus fangiana HOM05D004738 ORTHO05D006439 1.3e-170 603.6 377 76.1
Haze_16464 Corylus avellana HOM05D004738 ORTHO05D006439 4.8e-170 601.7 399 72.4
MELO3C023371.2 Cucumis melo HOM05D004738 ORTHO05D006439 1.4e-169 600.1 383 73.4
MD17G1198400 Malus domestica HOM05D004738 ORTHO05D006439 1.8e-169 599.7 381 74.5
Prupe.3G075100 Prunus persica HOM05D004738 ORTHO05D006439 9.1e-169 597.4 381 73.8
QL05p025470 Quercus lobata HOM05D004738 ORTHO05D006439 9.1e-169 597.4 374 74.3
CANSAT56G4214 Cannabis sativa HOM05D004738 ORTHO05D006439 1.2e-168 597.0 377 74.0
Gohir.A05G127000 Gossypium hirsutum HOM05D004738 ORTHO05D006439 1.2e-168 597.0 375 76.0
FAN05G5687 Fragaria x ananassa HOM05D004738 ORTHO05D006439 2.6e-168 595.9 384 72.4
Sed0002572 Sechium edule HOM05D004738 ORTHO05D006439 3.4e-168 595.5 373 74.0
VMungo1080G0347 Vigna mungo HOM05D004738 ORTHO05D006439 3.4e-168 595.5 378 74.1
Eucgr.F02574 Eucalyptus grandis HOM05D004738 ORTHO05D006439 4.5e-168 595.1 375 73.1
RcHm_v2.0_Chr2g0137281 Rosa chinensis HOM05D004738 ORTHO05D006439 4.5e-168 595.1 380 71.8
Ciclev10025569m.g Citrus clementina HOM05D004738 ORTHO05D006439 5.9e-168 594.7 437 65.2
Sc12g0009100 Simmondsia chinensis HOM05D004738 ORTHO05D006439 7.7e-168 594.3 382 73.6
Manes.04G120700 Manihot esculenta HOM05D004738 ORTHO05D006439 1.0e-167 594.0 442 65.2
Gorai.009G132100 Gossypium raimondii HOM05D004738 ORTHO05D006439 1.3e-167 593.6 374 75.7
Dinv30535 Davidia involucrata HOM05D004738 ORTHO05D006439 2.9e-167 592.4 373 75.6
Sabra03G0032700 Salix brachista HOM05D004738 ORTHO05D006439 3.8e-167 592.0 380 73.4
FvH4_6g30840 Fragaria vesca HOM05D004738 ORTHO05D006439 5.0e-167 591.7 384 71.9
TAR383G0518 Trochodendron aralioides HOM05D004738 ORTHO05D006439 5.0e-167 591.7 376 73.1
arahy.Tifrunner.gnm1.ann1.2F1L5Z Arachis hypogaea HOM05D004738 ORTHO05D006439 6.5e-167 591.3 386 73.8
Potri.003G058500 Populus trichocarpa HOM05D004738 ORTHO05D006439 1.1e-166 590.5 377 73.7
Cpa.g.sc10.174 Carica papaya HOM05D004738 ORTHO05D006439 2.5e-166 589.3 348 77.0
TWI12G0818 Tripterygium wilfordii HOM05D004738 ORTHO05D006439 4.2e-166 588.6 381 72.2
FAN02G1331 Fragaria x ananassa HOM05D004738 ORTHO05D006439 5.5e-166 588.2 380 72.1
CSS0005409 Camellia sinensis var. sinensis HOM05D004738 ORTHO05D006439 7.2e-166 587.8 384 74.2
Medtr2g102510 Medicago truncatula HOM05D004738 ORTHO05D006439 7.2e-166 587.8 375 73.9
Aqoxy7G03780 Aquilegia oxysepala HOM05D004738 ORTHO05D006439 1.2e-165 587.0 368 74.7
Glyma.15G012500 Glycine max HOM05D004738 ORTHO05D006439 1.6e-165 586.6 378 73.3
Actinidia08828 Actinidia chinensis HOM05D004738 ORTHO05D006439 2.1e-165 586.3 375 73.6
ECA247G3808 Erigeron canadensis HOM05D004738 ORTHO05D006439 2.1e-165 586.3 381 71.9
Nn8g39296 Nelumbo nucifera HOM05D004738 ORTHO05D006439 2.1e-165 586.3 383 72.6
vmacro16939 Vaccinium macrocarpon HOM05D004738 ORTHO05D006439 2.7e-165 585.9 382 73.6
Nitab4.5_0005784g0040 Nicotiana tabacum HOM05D004738 ORTHO05D006439 6.1e-165 584.7 382 71.5
Nn2g11846 Nelumbo nucifera HOM05D004738 ORTHO05D006439 1.0e-164 583.9 377 74.0
Rhsim12G0195800 Rhododendron simsii HOM05D004738 ORTHO05D006439 1.8e-164 583.2 376 73.4
arahy.Tifrunner.gnm1.ann1.S5ELWT Arachis hypogaea HOM05D004738 ORTHO05D006439 3.0e-164 582.4 395 71.6
FAN09G3531 Fragaria x ananassa HOM05D004738 ORTHO05D006439 3.0e-164 582.4 386 71.2
Ca_01103_v3 Cicer arietinum L. HOM05D004738 ORTHO05D006439 5.2e-164 581.6 378 73.0
DCAR_026302 Daucus carota HOM05D004738 ORTHO05D006439 5.2e-164 581.6 383 71.0
SGA_v2.0_scaffold37G14802 Striga asiatica HOM05D004738 ORTHO05D006439 5.2e-164 581.6 386 71.2
Solyc03g120430.3 Solanum lycopersicum HOM05D004738 ORTHO05D006439 2.0e-163 579.7 377 71.9
Sopen00g008920 Solanum pennellii HOM05D004738 ORTHO05D006439 2.0e-163 579.7 377 71.9
Sopen03g039310 Solanum pennellii HOM05D004738 ORTHO05D006439 2.0e-163 579.7 377 71.9
GSVIVG01017163001 Vitis vinifera HOM05D004738 ORTHO05D006439 2.0e-163 579.7 373 73.5
FAN14G4632 Fragaria x ananassa HOM05D004738 ORTHO05D006439 2.6e-163 579.3 396 69.4
Lsat_1_v5_gn_1_34140 Lactuca sativa HOM05D004738 ORTHO05D006439 2.6e-163 579.3 377 72.9
Lalb_Chr22g0351141 Lupinus albus HOM05D004738 ORTHO05D006439 2.6e-163 579.3 376 72.9
TPR.G37250 Trifolium pratense HOM05D004738 ORTHO05D006439 4.4e-163 578.6 375 72.0
Oeu022417.1 Olea europaea HOM05D004738 ORTHO05D006439 5.7e-163 578.2 379 72.0
Glyma.13G361400 Glycine max HOM05D004738 ORTHO05D006439 7.4e-163 577.8 348 77.0
HanXRQChr02g0032631 Helianthus annuus HOM05D004738 ORTHO05D006439 9.7e-163 577.4 378 72.0
PGSC0003DMG400002559 Solanum tuberosum HOM05D004738 ORTHO05D006439 1.3e-162 577.0 377 72.1
Cc04_g03640 Coffea canephora HOM05D004738 ORTHO05D006439 1.7e-162 576.6 379 70.2
Peaxi162Scf00015g00234 Petunia axillaris HOM05D004738 ORTHO05D006439 4.8e-162 575.1 377 71.9
Potri.001G177300 Populus trichocarpa HOM05D004738 ORTHO05D006439 1.8e-161 573.2 391 70.3
HanXRQChr04g0096441 Helianthus annuus HOM05D004738 ORTHO05D006439 7.0e-161 571.2 378 70.9
PSO210G3793 Papaver somniferum HOM05D004738 ORTHO05D006439 9.1e-161 570.9 376 71.3
Lj3g0008822 Lotus japonicus HOM05D004738 ORTHO05D006439 3.5e-160 568.9 387 69.8
Nitab4.5_0002424g0040 Nicotiana tabacum HOM05D004738 ORTHO05D006439 3.5e-160 568.9 403 67.2
Lj9A505T66 Lonicera japonica HOM05D004738 ORTHO05D006439 4.5e-160 568.5 344 76.7
Migut.I00837 Erythranthe guttata HOM05D004738 ORTHO05D006439 5.9e-160 568.2 377 70.0
Lj3g0001201 Lotus japonicus HOM05D004738 ORTHO05D006439 7.7e-160 567.8 378 71.2
Phvul.005G173200 Phaseolus vulgaris HOM05D004738 ORTHO05D006439 1.0e-159 567.4 379 69.7
Lalb_Chr14g0373571 Lupinus albus HOM05D004738 ORTHO05D006439 1.7e-159 566.6 376 71.3
PSO210G6241 Papaver somniferum HOM05D004738 ORTHO05D006439 1.7e-159 566.6 376 70.5
AUR62016418 Chenopodium quinoa HOM05D004738 ORTHO05D006439 1.5e-158 563.5 386 71.5
CAN.G438.45 Capsicum annuum HOM05D004738 ORTHO05D006439 1.9e-158 563.1 374 70.9
MSTRG.11096 Avicennia marina HOM05D004738 ORTHO05D006439 5.5e-158 561.6 381 68.2
AUR62011604 Chenopodium quinoa HOM05D004738 ORTHO05D006439 7.2e-158 561.2 375 73.1
PGR102G2550 Punica granatum HOM05D004738 ORTHO05D006439 7.2e-158 561.2 340 74.4
Ah.01g021090 Amaranthus hybridus HOM05D004738 ORTHO05D006439 3.6e-157 558.9 344 77.3
AT1G80380 Arabidopsis thaliana HOM05D004738 ORTHO05D006439 1.4e-156 557.0 300 88.3
Hund06597 Selenicereus undatus HOM05D004738 ORTHO05D006439 2.6e-155 552.7 378 68.8
EL10Ac9g21974 Beta vulgaris HOM05D004738 ORTHO05D006439 4.4e-155 552.0 365 72.3
MBI01_g13569_MAGBIO Magnolia biondii HOM05D004738 ORTHO05D006439 3.7e-154 548.9 370 69.5
ClCG09G002360 Citrullus lanatus HOM05D004738 ORTHO05D006439 1.8e-153 546.6 368 69.8
CDE06G1313 Ceratophyllum demersum HOM05D004738 ORTHO05D006439 2.7e-152 542.7 375 67.7
Gohir.D05G127900 Gossypium hirsutum HOM05D004738 ORTHO05D006439 4.5e-152 542.0 317 79.5
Os01g0682500 Oryza sativa ssp. japonica HOM05D004738 ORTHO05D006439 5.9e-152 541.6 335 73.4
Duzib192G0909 Durio zibethinus HOM05D004738 ORTHO05D006439 2.2e-151 539.7 329 76.3
Zm00001eb267390 Zea mays HOM05D004738 ORTHO05D006439 1.5e-147 526.9 335 70.4
CSS0037007 Camellia sinensis var. sinensis HOM05D004738 ORTHO05D006439 2.5e-142 509.6 348 70.4
Zm00001eb156570 Zea mays HOM05D004738 ORTHO05D006439 3.6e-141 505.8 332 69.9
ATR0083G024 Amborella trichopoda HOM05D004738 ORTHO05D006439 1.3e-138 497.3 374 62.8
BcaC03g15976 Brassica carinata HOM05D004738 ORTHO05D006439 2.1e-133 479.9 247 93.9
Oeu033460.1 Olea europaea HOM05D004738 ORTHO05D006439 4.4e-131 472.2 341 66.6
Nn2g11397 Nelumbo nucifera HOM05D004738 ORTHO05D006439 9.8e-131 471.1 355 64.2
unitig_21.g20511 Utricularia gibba HOM05D004738 ORTHO05D006439 2.9e-130 469.5 378 61.9
Pp3c18_16070 Physcomitrium patens HOM05D004738 ORTHO05D006439 2.0e-128 463.4 330 63.0
HPP92_011481 Vanilla planifolia HOM05D004738 ORTHO05D006439 1.7e-127 460.3 336 65.8
SEGI_20298 Sequoiadendron giganteum HOM05D004738 ORTHO05D006439 2.7e-120 436.4 341 59.5
SHI09688 Sapria himalayana HOM05D004738 ORTHO05D006439 1.7e-119 433.7 353 59.5
HPP92_011544 Vanilla planifolia HOM05D004738 ORTHO05D006439 2.8e-117 426.4 304 65.8
AagrBONN_evm.TU.Sc2ySwM_368.190 Anthoceros agrestis HOM05D004738 ORTHO05D006439 9.9e-115 417.9 334 56.6
Mapoly0010s0209 Marchantia polymorpha HOM05D004738 ORTHO05D006439 1.7e-114 417.2 347 54.2
SMO147G0425 Selaginella moellendorffii HOM05D004738 ORTHO05D006439 1.1e-113 414.5 336 56.0
Psat5g299520 Pisum sativum HOM05D004738 ORTHO05D006439 3.2e-113 412.9 274 70.4
CBR_g49861 Chara braunii HOM05D004738 ORTHO05D006439 1.8e-108 397.1 345 53.9
Cre12.g542300 Chlamydomonas reinhardtii HOM05D004738 ORTHO05D006439 3.9e-87 326.2 343 46.1
arahy.Tifrunner.gnm1.ann1.7R7SHJ Arachis hypogaea HOM05D004738 ORTHO05D006439 1.1e-86 324.7 280 60.4
arahy.Tifrunner.gnm1.ann1.1FY4ZR Arachis hypogaea HOM05D004738 ORTHO05D007023 4.2e-81 306.2 282 57.8
MCO11G539 Micromonas commoda HOM05D004738 ORTHO05D006439 1.6e-80 304.3 337 43.9
PRCOL_00005044 Prasinoderma coloniale HOM05D004738 ORTHO05D006439 4.3e-78 296.2 326 46.9
Dinv38066 Davidia involucrata HOM05D004738 ORTHO05D006439 8.8e-63 245.4 145 81.4
arahy.Tifrunner.gnm1.ann1.CI84PE Arachis hypogaea HOM05D004738 ORTHO05D006439 2.8e-53 213.8 196 59.2
Hund00584 Selenicereus undatus HOM05D004738 ORTHO05D006439 1.1e-52 211.8 136 72.1
TAR636G0147 Trochodendron aralioides HOM05D004738 ORTHO05D051490 2.0e-38 164.5 164 45.1
TAR636G3653 Trochodendron aralioides HOM05D004738 ORTHO05D051490 9.7e-38 162.2 164 44.5
Nn4g26563 Nelumbo nucifera HOM05D004738 ORTHO05D006439 1.4e-36 158.3 243 41.6
arahy.Tifrunner.gnm1.ann1.9N81UM Arachis hypogaea HOM05D005815 ORTHO05D007023 7.7e-35 152.5 284 34.5
Ah.09g223940 Amaranthus hybridus HOM05D004738 ORTHO05D001643 1.2e-30 138.7 95 73.7
Dinv38065 Davidia involucrata HOM05D004738 ORTHO05D006439 9.1e-28 129.0 79 75.9
Sabra01G0149000 Salix brachista HOM05D004738 ORTHO05D006439 3.0e-23 114.0 70 67.1
arahy.Tifrunner.gnm1.ann1.GN5QKJ Arachis hypogaea HOM05D005815 ORTHO05D007023 1.4e-20 105.1 64 73.4
Nn1g05393 Nelumbo nucifera HOM05D004738 ORTHO05D280673 3.0e-15 87.4 82 48.8
Pp3c21_6430 Physcomitrium patens HOM05D004738 ORTHO05D314778 9.5e-09 65.9 49 46.9


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