Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g07206 Brassica carinata HOM05D003670 ORTHO05D004767 1.1e-220 769.6 381 100.0
BcaC08g45368 Brassica carinata HOM05D003670 ORTHO05D004767 3.0e-210 734.9 382 96.9
C06p30000 Brassica napus HOM05D003670 ORTHO05D004767 3.0e-210 734.9 382 96.9
BolC6t38160H Brassica oleracea HOM05D003670 ORTHO05D004767 1.5e-209 732.6 382 96.6
A07p27230 Brassica napus HOM05D003670 ORTHO05D004767 1.7e-208 729.2 382 96.1
BraA07t30367Z Brassica rapa HOM05D003670 ORTHO05D004767 1.7e-208 729.2 382 96.1
Sp5g34280 Schrenkiella parvula HOM05D003670 ORTHO05D004767 8.3e-200 700.3 384 90.4
Thhalv10018699m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 2.1e-195 685.6 387 88.1
A07p44350 Brassica napus HOM05D003670 ORTHO05D004767 1.8e-191 672.5 381 87.1
BraA07t31943Z Brassica rapa HOM05D003670 ORTHO05D004767 1.6e-190 669.5 381 86.9
AL2G39700 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 5.9e-190 667.5 384 85.4
Carub.0002s2610 Capsella rubella HOM05D003670 ORTHO05D004767 2.9e-189 665.2 386 84.7
AT1G79230 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 1.9e-188 662.5 384 85.2
Aa31LG4G1790 Aethionema arabicum HOM05D003670 ORTHO05D004767 1.0e-181 640.2 372 85.2
CARHR016930 Cardamine hirsuta HOM05D003670 ORTHO05D004767 2.0e-177 625.9 385 80.3
THA.LOC104812362 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 6.4e-176 620.9 385 79.0
CARHR072860 Cardamine hirsuta HOM05D003670 ORTHO05D004767 5.1e-173 611.3 324 89.8
BcaB05g25180 Brassica carinata HOM05D003670 ORTHO05D004767 3.3e-172 608.6 320 90.3
Carub.0001s1620 Capsella rubella HOM05D003670 ORTHO05D004767 8.1e-171 604.0 384 77.3
BolC5t30186H Brassica oleracea HOM05D003670 ORTHO05D004767 7.1e-167 590.9 381 75.6
BcaC05g25571 Brassica carinata HOM05D003670 ORTHO05D004767 2.7e-166 589.0 381 75.3
C05p14650 Brassica napus HOM05D003670 ORTHO05D004767 6.0e-166 587.8 381 75.3
THA.LOC104813608 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 3.0e-165 585.5 382 77.7
Thhalv10007910m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 1.9e-164 582.8 321 85.7
A06p12380 Brassica napus HOM05D003670 ORTHO05D004767 3.6e-163 578.6 382 74.1
BraA06t24401Z Brassica rapa HOM05D003670 ORTHO05D004767 6.8e-162 574.3 382 73.8
BcaC08g47490 Brassica carinata HOM05D003670 ORTHO05D004767 1.7e-160 569.7 384 77.3
Gohir.D13G127300 Gossypium hirsutum HOM05D003670 ORTHO05D004767 3.8e-160 568.5 377 73.2
Hma1.2p1_0151F.1_g067325 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 1.9e-159 566.2 373 74.3
Gohir.A13G123400 Gossypium hirsutum HOM05D003670 ORTHO05D004767 4.2e-159 565.1 377 72.7
BcaB02g06624 Brassica carinata HOM05D003670 ORTHO05D004767 9.2e-159 563.9 380 72.6
Nitab4.5_0000029g0340 Nicotiana tabacum HOM05D003670 ORTHO05D004767 1.6e-158 563.1 376 73.1
PGR031G1669 Punica granatum HOM05D003670 ORTHO05D004767 2.7e-158 562.4 381 72.2
CSS0006756 Camellia sinensis var. sinensis HOM05D003670 ORTHO05D004767 3.5e-158 562.0 382 71.7
Gorai.013G142500 Gossypium raimondii HOM05D003670 ORTHO05D004767 3.5e-158 562.0 378 72.8
Manes.06G175700 Manihot esculenta HOM05D003670 ORTHO05D004767 7.8e-158 560.8 376 72.3
Peaxi162Scf00452g00333 Petunia axillaris HOM05D003670 ORTHO05D004767 5.1e-157 558.1 376 72.1
Nitab4.5_0006241g0010 Nicotiana tabacum HOM05D003670 ORTHO05D004767 1.1e-156 557.0 383 71.5
HanXRQChr11g0335601 Helianthus annuus HOM05D003670 ORTHO05D004767 1.5e-156 556.6 382 72.0
QL04p088520 Quercus lobata HOM05D003670 ORTHO05D004767 1.9e-156 556.2 404 69.1
Ciclev10005196m.g Citrus clementina HOM05D003670 ORTHO05D004767 4.3e-156 555.1 378 72.2
Aa31LG7G1000 Aethionema arabicum HOM05D003670 ORTHO05D004767 5.6e-156 554.7 323 81.1
Potri.007G069300 Populus trichocarpa HOM05D003670 ORTHO05D004767 1.2e-155 553.5 375 72.0
GSVIVG01036786001 Vitis vinifera HOM05D003670 ORTHO05D004767 1.6e-155 553.1 384 70.8
TWI39G0091 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 2.8e-155 552.4 377 71.9
Lsat_1_v5_gn_7_110680 Lactuca sativa HOM05D003670 ORTHO05D004767 3.6e-155 552.0 376 72.6
COL.COLO4_32264 Corchorus olitorius HOM05D003670 ORTHO05D004767 4.7e-155 551.6 346 75.7
TWI38G1711 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 6.2e-155 551.2 378 72.8
Manes.14G010300 Manihot esculenta HOM05D003670 ORTHO05D004767 1.4e-154 550.1 376 70.7
Rhsim06G0242300 Rhododendron simsii HOM05D003670 ORTHO05D004767 1.4e-154 550.1 398 69.3
MD05G1228000 Malus domestica HOM05D003670 ORTHO05D004767 3.1e-154 548.9 385 71.4
AL1G28600 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 4.0e-154 548.5 321 81.9
CiPaw.11G061900 Carya illinoinensis HOM05D003670 ORTHO05D004767 4.0e-154 548.5 347 74.9
RcHm_v2.0_Chr5g0024611 Rosa chinensis HOM05D003670 ORTHO05D004767 5.3e-154 548.1 385 71.9
Thecc.07G180400 Theobroma cacao HOM05D003670 ORTHO05D004767 5.3e-154 548.1 377 70.3
PGSC0003DMG400022232 Solanum tuberosum HOM05D003670 ORTHO05D004767 9.0e-154 547.4 382 70.7
MD10G1208500 Malus domestica HOM05D003670 ORTHO05D004767 1.5e-153 546.6 389 71.5
FvH4_3g14990 Fragaria vesca HOM05D003670 ORTHO05D004767 2.0e-153 546.2 384 71.1
Peaxi162Scf00006g00159 Petunia axillaris HOM05D003670 ORTHO05D004767 2.0e-153 546.2 381 70.6
Eucgr.F04458 Eucalyptus grandis HOM05D003670 ORTHO05D004767 2.6e-153 545.8 375 71.2
Cc05_g16310 Coffea canephora HOM05D003670 ORTHO05D004767 3.4e-153 545.4 378 70.6
FAN11G2825 Fragaria x ananassa HOM05D003670 ORTHO05D004767 3.4e-153 545.4 384 71.1
Prupe.4G134300 Prunus persica HOM05D003670 ORTHO05D004767 3.4e-153 545.4 378 71.7
Lj3g0014239 Lotus japonicus HOM05D003670 ORTHO05D004767 4.4e-153 545.0 385 70.9
ECA236G3562 Erigeron canadensis HOM05D003670 ORTHO05D004767 9.9e-153 543.9 324 78.7
FAN21G1395 Fragaria x ananassa HOM05D003670 ORTHO05D004767 9.9e-153 543.9 382 70.4
CAN.G943.51 Capsicum annuum HOM05D003670 ORTHO05D004767 1.3e-152 543.5 384 70.1
Sp1g14610 Schrenkiella parvula HOM05D003670 ORTHO05D004767 1.3e-152 543.5 323 79.3
Sopen07g034740 Solanum pennellii HOM05D003670 ORTHO05D004767 1.3e-152 543.5 379 70.4
Ca_03600_v3 Cicer arietinum L. HOM05D003670 ORTHO05D004767 2.2e-152 542.7 382 69.6
TAR583G0001 Trochodendron aralioides HOM05D003670 ORTHO05D004767 2.9e-152 542.3 375 71.5
Solyc02g078990.4 Solanum lycopersicum HOM05D003670 ORTHO05D004767 3.8e-152 542.0 318 78.9
TPR.G33813 Trifolium pratense HOM05D003670 ORTHO05D004767 4.9e-152 541.6 377 69.2
Nitab4.5_0005765g0040 Nicotiana tabacum HOM05D003670 ORTHO05D004767 1.1e-151 540.4 381 69.8
Solyc07g066580.3 Solanum lycopersicum HOM05D003670 ORTHO05D004767 1.1e-151 540.4 379 69.9
FAN25G1710 Fragaria x ananassa HOM05D003670 ORTHO05D004767 1.4e-151 540.0 397 69.3
Glyma.08G167100 Glycine max HOM05D003670 ORTHO05D004767 1.4e-151 540.0 374 71.1
Ah.10g033690 Amaranthus hybridus HOM05D003670 ORTHO05D004767 1.9e-151 539.7 397 69.0
Nn7g37780 Nelumbo nucifera HOM05D003670 ORTHO05D004767 1.9e-151 539.7 317 80.8
PSO675G6901 Papaver somniferum HOM05D003670 ORTHO05D004767 1.9e-151 539.7 385 69.4
Lalb_Chr25g0284691 Lupinus albus HOM05D003670 ORTHO05D004767 2.4e-151 539.3 380 69.7
Duzib187G0441 Durio zibethinus HOM05D003670 ORTHO05D004767 4.2e-151 538.5 317 77.0
Sopen02g023800 Solanum pennellii HOM05D003670 ORTHO05D004767 5.4e-151 538.1 316 79.4
Phvul.005G050400 Phaseolus vulgaris HOM05D003670 ORTHO05D004767 7.1e-151 537.7 382 70.4
PSO541G1524 Papaver somniferum HOM05D003670 ORTHO05D004767 9.3e-151 537.3 385 68.6
CsaV3_3G018980 Cucumis sativus L. HOM05D003670 ORTHO05D004767 3.5e-150 535.4 378 70.4
Potri.005G095300 Populus trichocarpa HOM05D003670 ORTHO05D004767 6.0e-150 534.6 309 80.6
Psat1g013760 Pisum sativum HOM05D003670 ORTHO05D004767 7.8e-150 534.3 378 70.4
VMungo1080G1660 Vigna mungo HOM05D003670 ORTHO05D004767 1.3e-149 533.5 317 79.2
unitig_578.g16333 Utricularia gibba HOM05D003670 ORTHO05D004767 3.0e-149 532.3 343 72.0
AT1G16460 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 3.9e-149 531.9 321 79.8
BolC6t40330H Brassica oleracea HOM05D003670 ORTHO05D004767 3.9e-149 531.9 337 81.0
CANSAT80G2697 Cannabis sativa HOM05D003670 ORTHO05D004767 5.1e-149 531.6 377 69.8
Medtr2g067080 Medicago truncatula HOM05D003670 ORTHO05D004767 5.1e-149 531.6 378 69.3
Sabra07G0056700 Salix brachista HOM05D003670 ORTHO05D004767 6.6e-149 531.2 368 69.8
ATR0763G120 Amborella trichopoda HOM05D003670 ORTHO05D004767 1.5e-148 530.0 378 69.8
MBI02_g18168_MAGBIO Magnolia biondii HOM05D003670 ORTHO05D004767 1.5e-148 530.0 376 70.5
Migut.H01671 Erythranthe guttata HOM05D003670 ORTHO05D004767 1.9e-148 529.6 386 67.9
Oeu002796.1 Olea europaea HOM05D003670 ORTHO05D004767 3.3e-148 528.9 331 73.4
EL10Ac2g03264 Beta vulgaris HOM05D003670 ORTHO05D004767 4.3e-148 528.5 385 68.1
MSTRG.14566 Avicennia marina HOM05D003670 ORTHO05D004767 1.1e-146 523.9 378 68.8
C06p53140 Brassica napus HOM05D003670 ORTHO05D004767 1.1e-146 523.9 337 80.7
Sed0012107 Sechium edule HOM05D003670 ORTHO05D004767 6.9e-146 521.2 377 68.2
AUR62039184 Chenopodium quinoa HOM05D003670 ORTHO05D004767 1.2e-145 520.4 387 66.9
AUR62037644 Chenopodium quinoa HOM05D003670 ORTHO05D004767 1.5e-145 520.0 387 66.7
Aqoxy1G01484 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 9.9e-145 517.3 309 75.7
Sabra05G0078800 Salix brachista HOM05D003670 ORTHO05D004767 9.9e-145 517.3 369 68.6
vmacro11699 Vaccinium macrocarpon HOM05D003670 ORTHO05D004767 5.4e-143 511.5 409 63.6
Os12g0608600 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 1.6e-142 510.0 317 74.4
Zm00001eb031400 Zea mays HOM05D003670 ORTHO05D004767 7.9e-142 507.7 330 72.7
HPP92_013192 Vanilla planifolia HOM05D003670 ORTHO05D004767 9.6e-140 500.7 368 65.2
Cfa022976 Carpinus fangiana HOM05D003670 ORTHO05D004767 3.7e-139 498.8 377 65.8
Oeu043724.2 Olea europaea HOM05D003670 ORTHO05D004767 8.1e-139 497.7 324 72.2
Glyma.15G260300 Glycine max HOM05D003670 ORTHO05D004767 3.1e-138 495.7 351 71.5
SGA_v2.0_scaffold186G40197 Striga asiatica HOM05D003670 ORTHO05D004767 3.4e-137 492.3 301 73.8
Sc06g0002800 Simmondsia chinensis HOM05D003670 ORTHO05D004767 7.6e-137 491.1 349 70.8
MSTRG.7076 Avicennia marina HOM05D003670 ORTHO05D004767 6.4e-136 488.0 347 66.3
DCAR_019919 Daucus carota HOM05D003670 ORTHO05D004767 6.4e-136 488.0 377 64.5
Duzib213G1009 Durio zibethinus HOM05D003670 ORTHO05D004767 8.4e-136 487.6 383 64.8
ClCG05G009800 Citrullus lanatus HOM05D003670 ORTHO05D000003 3.2e-135 485.7 376 65.4
arahy.Tifrunner.gnm1.ann1.36F1KB Arachis hypogaea HOM05D003670 ORTHO05D004767 2.7e-134 482.6 348 69.8
Hund20101 Selenicereus undatus HOM05D003670 ORTHO05D004767 2.5e-132 476.1 377 65.8
unitig_8.g4750 Utricularia gibba HOM05D003670 ORTHO05D004767 2.8e-131 472.6 388 61.1
arahy.Tifrunner.gnm1.ann1.YZ7E83 Arachis hypogaea HOM05D003670 ORTHO05D004767 2.0e-129 466.5 348 68.7
Nitab4.5_0000388g0140 Nicotiana tabacum HOM05D003670 ORTHO05D004767 1.4e-127 460.3 327 71.3
SEGI_21826 Sequoiadendron giganteum HOM05D003670 ORTHO05D004767 2.7e-126 456.1 312 67.3
MELO3C019489.2 Cucumis melo HOM05D003670 ORTHO05D004767 4.6e-126 455.3 327 70.9
DCAR_016837 Daucus carota HOM05D003670 ORTHO05D004767 3.9e-125 452.2 293 71.0
Lj2A15G76 Lonicera japonica HOM05D003670 ORTHO05D004767 5.9e-121 438.3 348 65.2
Os02g0167100 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 3.8e-120 435.6 294 66.3
QL04p088965 Quercus lobata HOM05D003670 ORTHO05D004767 4.2e-119 432.2 242 83.1
Mapoly0058s0078 Marchantia polymorpha HOM05D003670 ORTHO05D004767 2.8e-115 419.5 316 61.1
Zm00001eb207410 Zea mays HOM05D003670 ORTHO05D004767 5.0e-112 408.7 325 59.4
SGA_v2.0_scaffold49G18190 Striga asiatica HOM05D003670 ORTHO05D004767 2.1e-110 403.3 339 61.9
AagrBONN_evm.TU.Sc2ySwM_344.5346 Anthoceros agrestis HOM05D003670 ORTHO05D004767 7.9e-110 401.4 322 59.9
Haze_07818 Corylus avellana HOM05D003670 ORTHO05D004767 2.8e-107 392.9 325 64.6
Dinv19592 Davidia involucrata HOM05D003670 ORTHO05D004767 2.6e-105 386.3 270 71.5
Pp3c9_17670 Physcomitrium patens HOM05D003670 ORTHO05D004767 3.5e-105 386.0 328 55.8
CDE06G2006 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 9.4e-103 377.9 312 62.2
Rhsim05G0210500 Rhododendron simsii HOM05D003670 ORTHO05D004767 2.8e-99 366.3 230 76.1
SMO119G0061 Selaginella moellendorffii HOM05D003670 ORTHO05D004767 3.1e-98 362.8 302 57.3
HPP92_013209 Vanilla planifolia HOM05D003670 ORTHO05D004767 1.2e-97 360.9 368 51.9
A02p22680 Brassica napus HOM05D003670 ORTHO05D004767 1.4e-93 347.4 397 52.9
Cpa.g.sc34.17 Carica papaya HOM05D003670 ORTHO05D004767 8.3e-91 338.2 303 57.8
CDE02G0962 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 8.3e-91 338.2 233 67.4
Actinidia12766 Actinidia chinensis HOM05D003670 ORTHO05D004767 1.7e-88 330.5 232 71.6
MD05G1228700 Malus domestica HOM05D003670 ORTHO05D004767 8.5e-88 328.2 202 75.7
FAN16G2550 Fragaria x ananassa HOM05D003670 ORTHO05D004767 9.4e-87 324.7 200 75.0
C02p36310 Brassica napus HOM05D003670 ORTHO05D004767 3.6e-78 296.2 219 69.9
RcHm_v2.0_Chr5g0024731 Rosa chinensis HOM05D003670 ORTHO05D004767 3.2e-74 283.1 222 68.0
CBR_g17038 Chara braunii HOM05D003670 ORTHO05D004767 2.5e-71 273.5 356 43.8
MCO09G588 Micromonas commoda HOM05D003670 ORTHO05D004767 8.3e-67 258.5 297 46.1
Cre13.g607050 Chlamydomonas reinhardtii HOM05D003670 ORTHO05D004767 6.6e-64 248.8 333 41.7
PRCOL_00006295 Prasinoderma coloniale HOM05D003670 ORTHO05D004767 8.0e-62 241.9 300 44.3
Hma1.2p1_0269F.1_g107810 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 1.4e-50 204.5 153 67.3
Aqoxy1G03000 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 3.0e-48 196.8 112 76.8
Cfa026738 Carpinus fangiana HOM05D003670 ORTHO05D004767 2.0e-44 184.1 290 39.0
MD05G1228600 Malus domestica HOM05D003670 ORTHO05D004767 1.3e-40 171.4 183 56.3
BolC1t01654H Brassica oleracea HOM05D003670 ORTHO05D004767 9.6e-39 165.2 132 65.9
C03p82980 Brassica napus HOM05D003670 ORTHO05D004767 3.6e-38 163.3 95 83.2
BcaC01g00674 Brassica carinata HOM05D003670 ORTHO05D004767 1.8e-37 161.0 91 84.6
C01p17180 Brassica napus HOM05D003670 ORTHO05D004767 3.1e-37 160.2 132 64.4
BcaC04g18607 Brassica carinata HOM05D003670 ORTHO05D004767 2.0e-36 157.5 91 82.4
BolC9t58925H Brassica oleracea HOM05D003670 ORTHO05D004767 2.6e-36 157.1 132 62.9
CAN.G891.1 Capsicum annuum HOM05D003670 ORTHO05D004767 2.9e-35 153.7 94 79.8
Oeu010650.2 Olea europaea HOM05D003670 ORTHO05D004767 9.6e-31 138.7 102 69.6
Lsat_1_v5_gn_4_93521 Lactuca sativa HOM05D003670 ORTHO05D004767 9.3e-26 122.1 66 83.3
BcaC06g34801 Brassica carinata HOM05D003670 ORTHO05D004767 7.9e-25 119.0 91 69.2
BolC7t42971H Brassica oleracea HOM05D003670 ORTHO05D004767 2.3e-24 117.5 134 53.7
Mapoly0032s0014 Marchantia polymorpha HOM05D003670 ORTHO05D031137 6.7e-24 115.9 399 26.3
Oeu034061.1 Olea europaea HOM05D003670 ORTHO05D020012 6.7e-24 115.9 78 66.7
Cpa.g.sc34.16 Carica papaya HOM05D003670 ORTHO05D004767 1.6e-22 111.3 69 69.6
BcaC03g15876 Brassica carinata HOM05D003670 ORTHO05D020012 2.8e-22 110.5 62 79.0
Solyc06g009850.3 Solanum lycopersicum HOM05D003670 ORTHO05D014971 8.1e-22 109.0 122 50.0
CDE06G0877 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 6.5e-19 99.4 67 67.2
BcaC05g28269 Brassica carinata HOM05D003670 ORTHO05D014971 1.6e-17 94.7 51 88.2
AagrBONN_evm.TU.Sc2ySwM_117.2139 Anthoceros agrestis HOM05D003670 ORTHO05D031137 5.1e-16 89.7 244 29.9
QL04p088979 Quercus lobata HOM05D003670 ORTHO05D004767 1.2e-12 78.6 102 50.0
BcaC02g07679 Brassica carinata HOM05D003670 ORTHO05D014971 4.5e-12 76.6 41 85.4
C06p40160 Brassica napus HOM05D003670 ORTHO05D020012 1.0e-11 75.5 44 77.3
BolC6t39098H Brassica oleracea HOM05D003670 ORTHO05D020012 1.0e-11 75.5 44 77.3
Solyc06g009860.1 Solanum lycopersicum HOM05D003670 ORTHO05D020012 3.8e-11 73.6 68 55.9
Sopen06g004510 Solanum pennellii HOM05D003670 ORTHO05D014971 6.5e-11 72.8 47 72.3
Lsat_1_v5_gn_8_160501 Lactuca sativa HOM05D003670 ORTHO05D002209 1.5e-07 61.6 33 87.9
Hma1.2p1_1039F.1_g250810 Hydrangea macrophylla HOM05D001854 ORTHO05D001800 1.6e-06 58.2 39 64.1


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