Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g07141 Brassica carinata HOM05D001641 ORTHO05D001667 1.8e-35 152.5 107 100.0
BcaB06g28318 Brassica carinata HOM05D001641 ORTHO05D001667 6.4e-33 144.1 107 95.3
A10p15350 Brassica napus HOM05D001641 ORTHO05D001667 4.0e-27 124.8 107 69.2
BraA10t43698Z Brassica rapa HOM05D001641 ORTHO05D001667 4.0e-27 124.8 107 69.2
AL139U10020 Arabidopsis lyrata HOM05D001641 ORTHO05D001667 5.4e-24 114.4 112 80.4
Thhalv10015909m.g Eutrema salsugineum HOM05D001641 ORTHO05D001667 9.3e-24 113.6 112 78.6
Carub.0008s1957 Capsella rubella HOM05D001641 ORTHO05D001667 1.2e-23 113.2 112 80.4
AT5G58930 Arabidopsis thaliana HOM05D001641 ORTHO05D001667 4.6e-23 111.3 112 61.6
AL8G35300 Arabidopsis lyrata HOM05D001641 ORTHO05D001667 6.0e-23 110.9 112 78.6
BcaB01g04629 Brassica carinata HOM05D001641 ORTHO05D001667 3.9e-22 108.2 113 74.3
Sp6g20630 Schrenkiella parvula HOM05D001641 ORTHO05D001667 3.9e-22 108.2 112 59.8
BolC3t13853H Brassica oleracea HOM05D001641 ORTHO05D001667 5.1e-22 107.8 114 57.0
C03p14060 Brassica napus HOM05D001641 ORTHO05D001667 8.7e-22 107.1 114 57.0
A03p11970 Brassica napus HOM05D001641 ORTHO05D001667 2.1e-20 102.4 114 55.3
BraA03t10508Z Brassica rapa HOM05D001641 ORTHO05D001667 2.1e-20 102.4 114 55.3
BcaC04g19864 Brassica carinata HOM05D001641 ORTHO05D001667 6.2e-20 100.9 57 93.0
C09p51100 Brassica napus HOM05D001641 ORTHO05D001667 1.8e-19 99.4 57 91.2
BolC9t57970H Brassica oleracea HOM05D001641 ORTHO05D001667 1.8e-19 99.4 57 91.2
CARHR272870 Cardamine hirsuta HOM05D001641 ORTHO05D001667 1.8e-19 99.4 113 54.9
BcaC01g01865 Brassica carinata HOM05D001641 ORTHO05D001667 5.8e-18 94.4 56 83.9
C03p71190 Brassica napus HOM05D001641 ORTHO05D001667 5.8e-18 94.4 56 83.9
BolC3t19403H Brassica oleracea HOM05D001641 ORTHO05D001667 5.8e-18 94.4 56 83.9
BraA06t25133Z Brassica rapa HOM05D001641 ORTHO05D001667 5.8e-18 94.4 56 83.9
Carub.0005s1321 Capsella rubella HOM05D001641 ORTHO05D001667 1.3e-17 93.2 101 67.3
Aa31LG1G11630 Aethionema arabicum HOM05D001641 ORTHO05D001667 1.7e-17 92.8 111 63.1
BcaB01g00960 Brassica carinata HOM05D001641 ORTHO05D001667 1.7e-17 92.8 56 82.1
BcaB01g04627 Brassica carinata HOM05D001641 ORTHO05D001667 2.2e-17 92.4 113 60.2
A06p20570 Brassica napus HOM05D001641 ORTHO05D001667 2.9e-17 92.0 56 82.1
AL5G26210 Arabidopsis lyrata HOM05D001641 ORTHO05D001667 3.8e-17 91.7 100 65.0
THA.LOC104810732 Tarenaya hassleriana HOM05D001641 ORTHO05D001667 4.2e-16 88.2 58 75.9
AT3G46990 Arabidopsis thaliana HOM05D001641 ORTHO05D001667 9.3e-16 87.0 56 80.4
THA.LOC104814902 Tarenaya hassleriana HOM05D001641 ORTHO05D001667 1.2e-15 86.7 59 76.3
CARHR155640 Cardamine hirsuta HOM05D001641 ORTHO05D001667 2.1e-15 85.9 56 80.4
THA.LOC104799723 Tarenaya hassleriana HOM05D001641 ORTHO05D001667 1.9e-13 79.3 56 80.4
Sp5g14730 Schrenkiella parvula HOM05D001641 ORTHO05D001667 2.5e-13 79.0 57 73.7
Thhalv10010268m.g Eutrema salsugineum HOM05D001641 ORTHO05D001667 5.6e-13 77.8 60 75.0
Cpa.g.sc112.61 Carica papaya HOM05D001641 ORTHO05D001667 1.2e-10 70.1 56 66.1
Aa31LG4G15940 Aethionema arabicum HOM05D001641 ORTHO05D001667 1.1e-08 63.5 57 63.2


User provided reference genes

Program Settings