Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g07104 Brassica carinata HOM05D007694 ORTHO05D093325 2.9e-235 818.1 412 100.0
BcaC05g29803 Brassica carinata HOM05D007694 ORTHO05D019969 9.5e-93 344.7 485 48.9
C03p14610 Brassica napus HOM05D007694 ORTHO05D019969 6.2e-92 342.0 285 68.1
BcaB08g35388 Brassica carinata HOM05D007694 ORTHO05D003268 4.4e-82 309.3 328 56.1
C03p84280 Brassica napus HOM05D007694 ORTHO05D019969 7.1e-64 248.8 196 68.4
C02p22430 Brassica napus HOM05D007694 ORTHO05D023849 6.9e-59 232.3 371 43.7
C09p47680 Brassica napus HOM05D007694 ORTHO05D023849 4.5e-58 229.6 371 43.4
C01p17800 Brassica napus HOM05D007694 ORTHO05D017623 2.9e-57 226.9 413 40.4
BolC1t01714H Brassica oleracea HOM05D007694 ORTHO05D017623 2.9e-57 226.9 413 40.4
C05p07860 Brassica napus HOM05D007694 ORTHO05D023849 3.2e-56 223.4 303 47.9
C02p29800 Brassica napus HOM05D007694 ORTHO05D097335 9.3e-56 221.9 337 46.3
BcaB04g18319 Brassica carinata HOM05D007694 ORTHO05D091879 7.4e-53 212.2 296 48.3
C02p60690 Brassica napus HOM05D007694 ORTHO05D017623 7.4e-53 212.2 301 46.5
BolC4t23101H Brassica oleracea HOM05D007694 ORTHO05D017623 1.4e-51 208.0 285 47.0
BolC4t27454H Brassica oleracea HOM05D007694 ORTHO05D041000 9.0e-51 205.3 398 39.7
C04p59470 Brassica napus HOM05D007694 ORTHO05D041000 1.2e-50 204.9 396 39.4
BcaC09g51023 Brassica carinata HOM05D000022 ORTHO05D000071 9.3e-48 195.3 310 43.2
C04p68250 Brassica napus HOM05D007694 ORTHO05D017623 9.7e-45 185.3 159 67.3
BraA03t11220Z Brassica rapa HOM05D007694 ORTHO05D017623 4.8e-44 183.0 209 53.6
BcaB06g25426 Brassica carinata HOM05D007694 ORTHO05D017623 9.0e-43 178.7 143 66.4
BolC3t13901H Brassica oleracea HOM05D007694 ORTHO05D019969 1.7e-41 174.5 138 72.5
BcaC04g22991 Brassica carinata HOM05D007694 ORTHO05D094549 6.1e-39 166.0 222 46.4
BcaC02g07312 Brassica carinata HOM05D007694 ORTHO05D019980 2.8e-36 157.1 204 49.0
C04p38540 Brassica napus HOM05D007694 ORTHO05D023849 1.8e-35 154.5 145 61.4
BcaC07g39619 Brassica carinata HOM05D007694 ORTHO05D090536 2.4e-35 154.1 214 47.2
BcaC06g33706 Brassica carinata HOM05D007694 ORTHO05D019980 8.5e-33 145.6 208 45.7
C04p52480 Brassica napus HOM05D007694 ORTHO05D017623 3.0e-30 137.1 174 50.6
BcaC01g01501 Brassica carinata HOM05D007694 ORTHO05D023849 1.1e-29 135.2 127 60.6
BcaC08g43501 Brassica carinata HOM05D007694 ORTHO05D032221 1.7e-28 131.3 251 39.0
BcaB03g14933 Brassica carinata HOM05D007694 ORTHO05D095207 1.9e-24 117.9 310 32.6
BolC6t35963H Brassica oleracea HOM05D007694 ORTHO05D032221 4.2e-24 116.7 452 30.1
C03p13860 Brassica napus HOM05D007694 ORTHO05D019969 5.5e-24 116.3 105 56.2
C06p08850 Brassica napus HOM05D007694 ORTHO05D032221 4.7e-23 113.2 464 30.0
BolC3t15113H Brassica oleracea HOM05D007694 ORTHO05D019925 1.0e-22 112.1 206 38.3
BolC1t04613H Brassica oleracea HOM05D007694 ORTHO05D032021 1.4e-22 111.7 131 49.6
C03p03780 Brassica napus HOM05D007694 ORTHO05D032021 2.3e-22 110.9 206 36.9
C03p27330 Brassica napus HOM05D007694 ORTHO05D019925 3.0e-22 110.5 206 37.9
BcaC07g36849 Brassica carinata HOM05D007694 ORTHO05D019980 4.0e-22 110.2 87 69.0
BolC7t45648H Brassica oleracea HOM05D007694 ORTHO05D018628 2.6e-21 107.5 131 52.7
A06p28320 Brassica napus HOM05D007694 ORTHO05D019925 3.3e-21 107.1 128 50.0
BraA03t14786Z Brassica rapa HOM05D007694 ORTHO05D017623 3.3e-21 107.1 86 67.4
BcaC02g07899 Brassica carinata HOM05D007694 ORTHO05D032824 7.5e-21 105.9 127 52.0
C04p62200 Brassica napus HOM05D007694 ORTHO05D032824 7.5e-21 105.9 127 52.0
BolC4t27699H Brassica oleracea HOM05D007694 ORTHO05D032824 7.5e-21 105.9 127 52.0
BolC6t38748H Brassica oleracea HOM05D007694 ORTHO05D040580 7.5e-21 105.9 208 38.5
BraA06t25774Z Brassica rapa HOM05D007694 ORTHO05D019925 1.3e-20 105.1 128 49.2
BcaC07g37563 Brassica carinata HOM05D007694 ORTHO05D091300 3.7e-20 103.6 200 41.5
C03p26050 Brassica napus HOM05D007694 ORTHO05D103481 6.3e-20 102.8 131 50.4
C06p36270 Brassica napus HOM05D007694 ORTHO05D040580 6.3e-20 102.8 208 38.0
C09p74970 Brassica napus HOM05D007694 ORTHO05D018628 8.2e-20 102.4 131 51.9
BcaNung06212 Brassica carinata HOM05D007694 ORTHO05D032021 1.8e-19 101.3 126 48.4
BcaC06g34704 Brassica carinata HOM05D007694 ORTHO05D039975 2.4e-19 100.9 208 39.4
BcaC05g26461 Brassica carinata HOM05D007694 ORTHO05D090717 7.0e-19 99.4 165 43.6
C03p37800 Brassica napus HOM05D007694 ORTHO05D018628 7.0e-19 99.4 204 39.2
C07p15690 Brassica napus HOM05D007694 ORTHO05D039975 1.6e-18 98.2 208 38.9
C06p41010 Brassica napus HOM05D007694 ORTHO05D019925 8.5e-17 92.4 187 36.4
BolC7t43276H Brassica oleracea HOM05D007694 ORTHO05D019969 1.1e-16 92.0 91 53.8
BcaNung05554 Brassica carinata HOM05D007694 ORTHO05D019980 1.5e-16 91.7 142 40.8
BolC7t41525H Brassica oleracea HOM05D006896 ORTHO05D007622 2.5e-16 90.9 123 43.9
BcaC01g05258 Brassica carinata HOM05D007694 ORTHO05D096253 3.2e-16 90.5 141 42.6
BcaB08g34287 Brassica carinata HOM05D007694 ORTHO05D018628 7.2e-16 89.4 175 41.7
BcaB03g13247 Brassica carinata HOM05D007694 ORTHO05D007622 9.4e-16 89.0 230 30.9
BcaB04g17819 Brassica carinata HOM05D000471 ORTHO05D000199 9.4e-16 89.0 59 76.3
BcaC08g46337 Brassica carinata HOM05D007694 ORTHO05D019925 1.4e-14 85.1 107 45.8
C05p39780 Brassica napus HOM05D007694 ORTHO05D018628 1.4e-14 85.1 95 55.8
BolC5t32721H Brassica oleracea HOM05D007694 ORTHO05D018628 4.0e-14 83.6 93 55.9
BcaC03g17842 Brassica carinata HOM05D010239 ORTHO05D021857 1.3e-12 78.6 114 47.4
C02p58810 Brassica napus HOM05D010239 ORTHO05D021857 1.3e-12 78.6 114 47.4
BcaC08g45840 Brassica carinata HOM05D007694 ORTHO05D094686 2.2e-12 77.8 91 50.5
A08p01330 Brassica napus HOM05D010239 ORTHO05D021857 4.1e-11 73.6 114 45.6
BcaC02g11690 Brassica carinata HOM05D016611 ORTHO05D031712 5.4e-11 73.2 122 46.7
BcaC07g37747 Brassica carinata HOM05D007694 ORTHO05D019980 7.0e-11 72.8 92 43.5
BcaNung03237 Brassica carinata HOM05D007694 ORTHO05D092031 9.1e-11 72.4 80 57.5
A06p00150 Brassica napus HOM05D008960 ORTHO05D021621 1.2e-10 72.0 90 50.0
BcaB06g29478 Brassica carinata HOM05D008960 ORTHO05D021621 1.6e-10 71.6 102 46.1
BcaC03g18085 Brassica carinata HOM05D008960 ORTHO05D021621 1.6e-10 71.6 102 46.1
A09p11800 Brassica napus HOM05D010239 ORTHO05D021857 1.6e-10 71.6 114 43.9
BolC2t12209H Brassica oleracea HOM05D008960 ORTHO05D021621 1.6e-10 71.6 102 46.1
BcaC01g04928 Brassica carinata HOM05D010239 ORTHO05D024417 4.5e-10 70.1 113 43.4
A07p28910 Brassica napus HOM05D008960 ORTHO05D021621 4.5e-10 70.1 90 48.9
C03p32000 Brassica napus HOM05D010239 ORTHO05D024417 4.5e-10 70.1 113 43.4
BraA07t30533Z Brassica rapa HOM05D008960 ORTHO05D021621 4.5e-10 70.1 90 48.9
BcaC05g29027 Brassica carinata HOM05D010239 ORTHO05D005077 5.9e-10 69.7 120 40.0
BolC3t15543H Brassica oleracea HOM05D010239 ORTHO05D104682 1.0e-09 68.9 113 42.5
C06p42770 Brassica napus HOM05D008960 ORTHO05D033710 1.3e-09 68.6 127 40.2
BolC5t29133H Brassica oleracea HOM05D010239 ORTHO05D024417 1.3e-09 68.6 113 42.5
C03p00010 Brassica napus HOM05D010239 ORTHO05D024417 2.2e-09 67.8 98 43.9
BcaC05g25793 Brassica carinata HOM05D007694 ORTHO05D092144 6.5e-09 66.2 81 53.1
BcaC03g18291 Brassica carinata HOM05D010239 ORTHO05D090330 1.1e-08 65.5 94 48.9
BolC2t12312H Brassica oleracea HOM05D010239 ORTHO05D021857 1.1e-08 65.5 94 48.9
BcaB04g17812 Brassica carinata HOM05D008960 ORTHO05D021862 1.5e-08 65.1 110 43.6
BcaC03g12959 Brassica carinata HOM05D010239 ORTHO05D090479 1.9e-08 64.7 113 41.6
C02p01760 Brassica napus HOM05D010239 ORTHO05D024417 1.9e-08 64.7 113 41.6
C06p25450 Brassica napus HOM05D009661 ORTHO05D020160 1.9e-08 64.7 146 39.7
C03p64400 Brassica napus HOM05D009661 ORTHO05D018783 2.5e-08 64.3 96 49.0
C04p15290 Brassica napus HOM05D007694 ORTHO05D103098 2.5e-08 64.3 54 59.3
A01p05300 Brassica napus HOM05D016611 ORTHO05D100862 4.2e-08 63.5 109 47.7
A03p31780 Brassica napus HOM05D016611 ORTHO05D102416 4.2e-08 63.5 109 47.7
A06p35440 Brassica napus HOM05D009661 ORTHO05D018783 5.5e-08 63.2 96 47.9
BraA06t26467Z Brassica rapa HOM05D009661 ORTHO05D018783 5.5e-08 63.2 96 47.9
A10p24070 Brassica napus HOM05D009661 ORTHO05D018783 7.2e-08 62.8 96 46.9
BraA10t44470Z Brassica rapa HOM05D009661 ORTHO05D018783 7.2e-08 62.8 96 46.9
BcaB05g23971 Brassica carinata HOM05D007694 ORTHO05D092126 1.6e-07 61.6 111 36.9
C01p02030 Brassica napus HOM05D009661 ORTHO05D020160 2.7e-07 60.8 54 66.7
C09p67420 Brassica napus HOM05D010239 ORTHO05D032921 3.6e-07 60.5 79 45.6
BolC9t59504H Brassica oleracea HOM05D010239 ORTHO05D032921 3.6e-07 60.5 79 45.6
BcaB03g12442 Brassica carinata HOM05D003157 ORTHO05D004447 1.0e-06 58.9 123 36.6
BcaC01g00023 Brassica carinata HOM05D008960 ORTHO05D091451 1.4e-06 58.5 63 55.6
BraA08t32183Z Brassica rapa HOM05D010239 ORTHO05D021857 1.4e-06 58.5 94 45.7
BcaB03g15520 Brassica carinata HOM05D009681 ORTHO05D013235 4.0e-06 57.0 327 29.1
BolC4t22879H Brassica oleracea HOM05D016611 ORTHO05D031712 4.0e-06 57.0 85 47.1
C04p12320 Brassica napus HOM05D016611 ORTHO05D031712 5.2e-06 56.6 85 47.1


User provided reference genes

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