Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g07039 Brassica carinata HOM05D007355 ORTHO05D009343 1.6e-42 175.6 86 100.0
BcaC08g45561 Brassica carinata HOM05D007355 ORTHO05D009343 1.5e-32 142.5 77 90.9
C06p32480 Brassica napus HOM05D007355 ORTHO05D009343 3.3e-32 141.4 77 90.9
BolC6t38371H Brassica oleracea HOM05D007355 ORTHO05D009343 3.3e-32 141.4 77 90.9
BcaC08g47049 Brassica carinata HOM05D007355 ORTHO05D009343 4.8e-31 137.5 84 79.8
C06p49660 Brassica napus HOM05D007355 ORTHO05D009343 1.8e-30 135.6 84 81.0
BolC6t40005H Brassica oleracea HOM05D007355 ORTHO05D009343 1.8e-30 135.6 84 81.0
Thhalv10019842m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 4.1e-30 134.4 81 81.5
A07p41240 Brassica napus HOM05D007355 ORTHO05D009343 7.0e-30 133.7 84 78.6
BraA07t31659Z Brassica rapa HOM05D007355 ORTHO05D009343 7.0e-30 133.7 84 78.6
CARHR069120 Cardamine hirsuta HOM05D007355 ORTHO05D009343 6.7e-25 117.1 83 79.5
AL2G35700 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 8.8e-25 116.7 81 77.8
Carub.0002s2256 Capsella rubella HOM05D007355 ORTHO05D009343 4.4e-24 114.4 86 70.9
AT1G75717 Arabidopsis thaliana HOM05D007355 ORTHO05D009343 9.7e-24 113.2 82 75.6
Aa31LG4G5940 Aethionema arabicum HOM05D007355 ORTHO05D009343 4.8e-23 110.9 77 74.0
BcaB03g14421 Brassica carinata HOM05D007355 ORTHO05D009343 3.7e-15 84.7 84 61.9
Thhalv10009918m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 4.8e-15 84.3 76 68.4
Gohir.A05G257150 Gossypium hirsutum HOM05D007355 ORTHO05D009343 8.3e-15 83.6 76 59.2
Gorai.009G270200 Gossypium raimondii HOM05D007355 ORTHO05D009343 8.3e-15 83.6 76 59.2
BcaC07g39013 Brassica carinata HOM05D007355 ORTHO05D009343 1.4e-14 82.8 76 63.2
A08p29560 Brassica napus HOM05D007355 ORTHO05D009343 1.4e-14 82.8 76 63.2
C08p19840 Brassica napus HOM05D007355 ORTHO05D009343 1.4e-14 82.8 76 63.2
BolC8t49623H Brassica oleracea HOM05D007355 ORTHO05D009343 1.4e-14 82.8 76 63.2
BraA08t34894Z Brassica rapa HOM05D007355 ORTHO05D009343 1.4e-14 82.8 76 63.2
Gorai.009G194900 Gossypium raimondii HOM05D007355 ORTHO05D009343 1.8e-14 82.4 76 60.5
THA.LOC104814032 Tarenaya hassleriana HOM05D007355 ORTHO05D009343 1.8e-14 82.4 91 58.2
Duzib093G0416 Durio zibethinus HOM05D007355 ORTHO05D009343 3.1e-14 81.6 86 55.8
Gohir.D05G258650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 3.1e-14 81.6 76 59.2
FAN20G0162 Fragaria x ananassa HOM05D007355 ORTHO05D009343 4.1e-14 81.3 87 55.2
AL1G32690 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 5.4e-14 80.9 81 60.5
CARHR020450 Cardamine hirsuta HOM05D007355 ORTHO05D009343 5.4e-14 80.9 77 63.6
Gohir.A05G186732 Gossypium hirsutum HOM05D007355 ORTHO05D009343 5.4e-14 80.9 76 60.5
PGR083G2600 Punica granatum HOM05D007355 ORTHO05D009343 5.4e-14 80.9 73 63.0
Sp1g17750 Schrenkiella parvula HOM05D007355 ORTHO05D009343 7.0e-14 80.5 77 64.9
Haze_22626 Corylus avellana HOM05D007355 ORTHO05D009343 9.1e-14 80.1 74 67.6
Carub.0001s1949 Capsella rubella HOM05D007355 ORTHO05D009343 1.6e-13 79.3 77 61.0
Gohir.D05G189650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.6e-13 79.3 76 59.2
MD15G1013100 Malus domestica HOM05D007355 ORTHO05D009343 1.6e-13 79.3 82 56.1
arahy.Tifrunner.gnm1.ann1.PADY8Y Arachis hypogaea HOM05D007355 ORTHO05D009343 3.5e-13 78.2 74 58.1
CiPaw.08G065900 Carya illinoinensis HOM05D007355 ORTHO05D009343 3.5e-13 78.2 81 59.3
FAN15G2202 Fragaria x ananassa HOM05D007355 ORTHO05D009343 4.5e-13 77.8 88 51.1
FAN27G0012 Fragaria x ananassa HOM05D007355 ORTHO05D009343 4.5e-13 77.8 88 51.1
Potri.005G238400 Populus trichocarpa HOM05D007355 ORTHO05D009343 5.9e-13 77.4 69 65.2
Ciclev10003277m.g Citrus clementina HOM05D007355 ORTHO05D009343 7.7e-13 77.0 76 60.5
Lalb_Chr14g0369841 Lupinus albus HOM05D007355 ORTHO05D009343 7.7e-13 77.0 72 59.7
Actinidia37930 Actinidia chinensis HOM05D007355 ORTHO05D009343 1.0e-12 76.6 78 57.7
arahy.Tifrunner.gnm1.ann1.Y2NNQI Arachis hypogaea HOM05D007355 ORTHO05D009343 1.0e-12 76.6 72 58.3
Manes.18G014200 Manihot esculenta HOM05D007355 ORTHO05D009343 1.3e-12 76.3 79 54.4
Thecc.08G043500 Theobroma cacao HOM05D007355 ORTHO05D009343 1.3e-12 76.3 75 62.7
Ca_13424_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 1.7e-12 75.9 75 54.7
Ca_13425_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 1.7e-12 75.9 75 54.7
QL02p011487 Quercus lobata HOM05D007355 ORTHO05D009343 1.7e-12 75.9 79 58.2
Sabra05G0184200 Salix brachista HOM05D007355 ORTHO05D009343 1.7e-12 75.9 70 64.3
Gohir.D06G000500 Gossypium hirsutum HOM05D007355 ORTHO05D009343 2.3e-12 75.5 71 60.6
Gorai.010G004900 Gossypium raimondii HOM05D007355 ORTHO05D009343 2.3e-12 75.5 71 60.6
Cfa013942 Carpinus fangiana HOM05D007355 ORTHO05D009343 2.9e-12 75.1 75 62.7
Manes.05G148200 Manihot esculenta HOM05D007355 ORTHO05D009343 2.9e-12 75.1 78 59.0
Aqoxy5G01778 Aquilegia oxysepala HOM05D007355 ORTHO05D009343 5.0e-12 74.3 79 50.6
Gohir.A06G004700 Gossypium hirsutum HOM05D007355 ORTHO05D009343 5.0e-12 74.3 71 59.2
VMungo1309G0669 Vigna mungo HOM05D007355 ORTHO05D009343 5.0e-12 74.3 68 60.3
Glyma.06G024800 Glycine max HOM05D007355 ORTHO05D009343 6.6e-12 73.9 69 60.9
Peaxi162Scf00400g00042 Petunia axillaris HOM05D007355 ORTHO05D009343 6.6e-12 73.9 82 53.7
Ah.11g039070 Amaranthus hybridus HOM05D007355 ORTHO05D009343 8.6e-12 73.6 78 51.3
Glyma.04G024700 Glycine max HOM05D007355 ORTHO05D009343 8.6e-12 73.6 69 62.3
CiPaw.07G150900 Carya illinoinensis HOM05D007355 ORTHO05D009343 1.1e-11 73.2 76 60.5
COL.COLO4_26156 Corchorus olitorius HOM05D007355 ORTHO05D009343 1.1e-11 73.2 81 55.6
Lj5g0016063 Lotus japonicus HOM05D007355 ORTHO05D009343 1.1e-11 73.2 79 55.7
Lsat_1_v5_gn_2_9841 Lactuca sativa HOM05D007355 ORTHO05D009343 1.5e-11 72.8 88 46.6
Sed0019478 Sechium edule HOM05D007355 ORTHO05D009343 1.5e-11 72.8 68 57.4
Rhsim07G0246800 Rhododendron simsii HOM05D007355 ORTHO05D009343 1.9e-11 72.4 69 53.6
ClCG05G018320 Citrullus lanatus HOM05D007355 ORTHO05D009343 2.5e-11 72.0 72 56.9
DCAR_017465 Daucus carota HOM05D007355 ORTHO05D009343 2.5e-11 72.0 80 53.8
BcaB03g14350 Brassica carinata HOM05D007355 ORTHO05D009343 3.3e-11 71.6 73 58.9
Prupe.1G366200 Prunus persica HOM05D007355 ORTHO05D009343 3.3e-11 71.6 85 52.9
MBI05_g15356_MAGBIO Magnolia biondii HOM05D007355 ORTHO05D009343 4.2e-11 71.2 68 57.4
Phvul.009G016500 Phaseolus vulgaris HOM05D007355 ORTHO05D009343 7.2e-11 70.5 68 58.8
Dinv39511 Davidia involucrata HOM05D007355 ORTHO05D009343 9.5e-11 70.1 88 47.7
Cpa.g.sc26.34 Carica papaya HOM05D007355 ORTHO05D009343 1.6e-10 69.3 80 55.0
Medtr1g025150 Medicago truncatula HOM05D007355 ORTHO05D009343 1.6e-10 69.3 77 50.6
Solyc04g081380.1 Solanum lycopersicum HOM05D007355 ORTHO05D009343 1.6e-10 69.3 86 48.8
BcaB03g12886 Brassica carinata HOM05D007355 ORTHO05D009343 2.1e-10 68.9 77 51.9
CsaV3_3G045820 Cucumis sativus L. HOM05D007355 ORTHO05D009343 2.8e-10 68.6 70 55.7
TAR625G0791 Trochodendron aralioides HOM05D007355 ORTHO05D009343 2.8e-10 68.6 82 50.0
PGSC0003DMG400009860 Solanum tuberosum HOM05D007355 ORTHO05D009343 4.7e-10 67.8 86 47.7
TPR.G26402 Trifolium pratense HOM05D007355 ORTHO05D009343 6.1e-10 67.4 77 48.1
Migut.C00824 Erythranthe guttata HOM05D007355 ORTHO05D009343 1.4e-09 66.2 99 45.5
Lalb_Chr22g0354351 Lupinus albus HOM05D007355 ORTHO05D009343 1.8e-09 65.9 92 45.7
Eucgr.F01645 Eucalyptus grandis HOM05D007355 ORTHO05D009343 4.0e-09 64.7 76 50.0
Hma1.2p1_0638F.1_g193820 Hydrangea macrophylla HOM05D007355 ORTHO05D009343 4.0e-09 64.7 79 51.9
Lj1g0016145 Lotus japonicus HOM05D007355 ORTHO05D009343 4.0e-09 64.7 70 57.1
Nn5g30158 Nelumbo nucifera HOM05D007355 ORTHO05D009343 4.0e-09 64.7 84 46.4
Sc15g0005040 Simmondsia chinensis HOM05D007355 ORTHO05D009343 4.0e-09 64.7 80 53.8
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 5.2e-09 64.3 86 46.5
CSS0013130 Camellia sinensis var. sinensis HOM05D007355 ORTHO05D009343 6.8e-09 63.9 79 49.4
SalBow7G4291 Salvia bowleyana HOM05D007355 ORTHO05D009343 1.5e-08 62.8 75 52.0
CAN.G311.23 Capsicum annuum HOM05D007355 ORTHO05D009343 9.8e-08 60.1 49 63.3
Atru.chr13.303 Acer truncatum HOM05D007355 ORTHO05D009343 1.3e-07 59.7 57 56.1
DCAR_013865 Daucus carota HOM05D007355 ORTHO05D009343 2.2e-07 58.9 78 46.2
Nn1g05885 Nelumbo nucifera HOM05D007355 ORTHO05D009343 2.2e-07 58.9 81 44.4
MELO3C011006.2 Cucumis melo HOM05D007355 ORTHO05D009343 3.7e-07 58.2 77 48.1
Sed0024841 Sechium edule HOM05D007355 ORTHO05D009343 6.3e-07 57.4 71 47.9
ClCG08G014360 Citrullus lanatus HOM05D007355 ORTHO05D009343 1.1e-06 56.6 75 48.0
ATR0627G001 Amborella trichopoda HOM05D007355 ORTHO05D009343 3.1e-06 55.1 68 48.5
CsaV3_2G029470 Cucumis sativus L. HOM05D007355 ORTHO05D009343 5.4e-06 54.3 75 46.7


User provided reference genes

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