Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g06883 Brassica carinata HOM05D009593 ORTHO05D011753 7.0e-37 156.8 78 100.0
A10p03570 Brassica napus HOM05D009593 ORTHO05D011753 3.6e-33 144.4 78 92.3
BraA10t42634Z Brassica rapa HOM05D009593 ORTHO05D011753 3.6e-33 144.4 78 92.3
BcaC05g24417 Brassica carinata HOM05D009593 ORTHO05D011753 1.4e-32 142.5 78 89.7
C05p03260 Brassica napus HOM05D009593 ORTHO05D011753 1.4e-32 142.5 78 89.7
BolC5t29107H Brassica oleracea HOM05D009593 ORTHO05D011753 1.4e-32 142.5 78 89.7
BcaC05g24415 Brassica carinata HOM05D009593 ORTHO05D011753 4.8e-30 134.0 78 87.2
BcaC07g42151 Brassica carinata HOM05D009593 ORTHO05D011753 5.9e-28 127.1 78 83.3
C08p51980 Brassica napus HOM05D009593 ORTHO05D011753 5.9e-28 127.1 78 83.3
BraA09t42093Z Brassica rapa HOM05D009593 ORTHO05D011753 5.9e-28 127.1 78 83.3
BcaC07g42152 Brassica carinata HOM05D009593 ORTHO05D011753 1.3e-27 125.9 78 82.1
A09p67610 Brassica napus HOM05D009593 ORTHO05D011753 6.5e-27 123.6 78 80.8
AT1G05065 Arabidopsis thaliana HOM05D009593 ORTHO05D011753 1.0e-24 116.3 77 76.6
Thhalv10009388m.g Eutrema salsugineum HOM05D009593 ORTHO05D011753 2.3e-24 115.2 75 81.3
Sp1g03940 Schrenkiella parvula HOM05D009593 ORTHO05D011753 1.2e-20 102.8 65 81.5
CARHR004530 Cardamine hirsuta HOM05D009593 ORTHO05D011753 1.6e-20 102.4 78 73.1
Carub.0001s0434 Capsella rubella HOM05D009593 ORTHO05D011753 4.2e-18 94.4 85 71.8
Aa31LG8G1890 Aethionema arabicum HOM05D009593 ORTHO05D011753 6.1e-17 90.5 82 61.0
BcaB02g06884 Brassica carinata HOM05D009593 ORTHO05D011753 2.0e-15 85.5 43 97.7
Thhalv10017495m.g Eutrema salsugineum HOM05D009593 ORTHO05D011753 5.9e-12 73.9 80 61.2
CARHR126470 Cardamine hirsuta HOM05D009593 ORTHO05D011753 1.6e-09 65.9 77 59.7
Carub.0004s1395 Capsella rubella HOM05D009593 ORTHO05D011753 4.7e-09 64.3 73 57.5
BcaB02g10457 Brassica carinata HOM05D009593 ORTHO05D011753 1.0e-08 63.2 73 53.4
A05p13310 Brassica napus HOM05D009593 ORTHO05D011753 8.9e-08 60.1 79 49.4
C04p17060 Brassica napus HOM05D009593 ORTHO05D011753 8.9e-08 60.1 80 52.5
AL4G28020 Arabidopsis lyrata HOM05D009593 ORTHO05D011753 3.4e-07 58.2 74 48.6
BcaC01g05902 Brassica carinata HOM05D009593 ORTHO05D011753 1.7e-06 55.8 80 52.5


User provided reference genes

Program Settings