Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g06822 Brassica carinata HOM05D003889 ORTHO05D004407 5.2e-94 347.8 191 100.0
BcaB03g12757 Brassica carinata HOM05D003889 ORTHO05D004407 1.5e-53 213.4 112 95.5
A08p18050 Brassica napus HOM05D003889 ORTHO05D004407 1.8e-49 199.9 112 89.3
BraA08t33755Z Brassica rapa HOM05D003889 ORTHO05D004407 3.3e-48 195.7 112 87.5
BolC3t21018H Brassica oleracea HOM05D003889 ORTHO05D004407 4.5e-45 185.3 106 88.7
C03p87160 Brassica napus HOM05D003889 ORTHO05D004407 5.9e-45 184.9 107 87.9
Sp7g30460 Schrenkiella parvula HOM05D003889 ORTHO05D004407 3.4e-37 159.1 115 72.2
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 1.4e-35 153.7 115 72.2
CARHR240680 Cardamine hirsuta HOM05D003889 ORTHO05D004407 4.2e-35 152.1 114 71.1
Carub.0007s0783 Capsella rubella HOM05D003889 ORTHO05D004407 6.1e-34 148.3 109 69.7
AT4G32700 Arabidopsis thaliana HOM05D003889 ORTHO05D004407 7.9e-34 147.9 114 67.5
AL7G19040 Arabidopsis lyrata HOM05D003889 ORTHO05D004407 3.0e-33 146.0 114 67.5
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 1.1e-32 144.1 115 70.4
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 4.8e-31 138.7 115 67.8
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 1.4e-30 137.1 115 67.0
Aa31LG2G16920 Aethionema arabicum HOM05D003889 ORTHO05D004407 6.1e-10 68.6 123 39.8


User provided reference genes

Program Settings