Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g06813 Brassica carinata HOM05D009623 ORTHO05D011251 2.6e-37 158.3 84 100.0
BraA10t42755Z Brassica rapa HOM05D009623 ORTHO05D011251 2.3e-33 145.2 84 89.3
A10p04840 Brassica napus HOM05D009623 ORTHO05D011251 1.1e-32 142.9 84 86.9
BolC5t29225H Brassica oleracea HOM05D009623 ORTHO05D011251 2.8e-31 138.3 84 84.5
BcaC05g24293 Brassica carinata HOM05D009623 ORTHO05D011251 3.1e-30 134.8 84 83.3
C05p04540 Brassica napus HOM05D009623 ORTHO05D011251 3.1e-30 134.8 84 83.3
AT1G06225 Arabidopsis thaliana HOM05D009623 ORTHO05D011251 1.5e-29 132.5 84 82.1
AL1G16210 Arabidopsis lyrata HOM05D009623 ORTHO05D011251 2.9e-28 128.3 84 81.0
CARHR005760 Cardamine hirsuta HOM05D009623 ORTHO05D011251 4.6e-26 120.9 84 76.2
Carub.0001s0558 Capsella rubella HOM05D009623 ORTHO05D011251 1.1e-22 109.8 84 71.4
Thhalv10017782m.g Eutrema salsugineum HOM05D009623 ORTHO05D011251 1.7e-20 102.4 84 66.7
AL4G26240 Arabidopsis lyrata HOM05D009623 ORTHO05D011251 1.1e-19 99.8 84 65.5
Sp4g13550 Schrenkiella parvula HOM05D009623 ORTHO05D011251 1.1e-19 99.8 84 63.1
A04p23810 Brassica napus HOM05D009623 ORTHO05D011251 9.2e-19 96.7 85 65.9
CARHR124630 Cardamine hirsuta HOM05D009623 ORTHO05D011251 1.6e-18 95.9 84 61.9
BraA04t17906Z Brassica rapa HOM05D009623 ORTHO05D011251 2.1e-18 95.5 85 64.7
BcaB06g28482 Brassica carinata HOM05D009623 ORTHO05D011251 3.5e-18 94.7 85 62.4
C04p60300 Brassica napus HOM05D009623 ORTHO05D011251 3.5e-18 94.7 85 62.4
BolC4t27531H Brassica oleracea HOM05D009623 ORTHO05D011251 3.5e-18 94.7 85 62.4
BcaB06g28408 Brassica carinata HOM05D009623 ORTHO05D011251 7.8e-18 93.6 85 62.4
AT2G31081 Arabidopsis thaliana HOM05D009623 ORTHO05D011251 3.9e-17 91.3 84 64.3
THA.LOC104800858 Tarenaya hassleriana HOM05D009623 ORTHO05D011251 1.6e-15 85.9 84 61.9
Carub.0004s1231 Capsella rubella HOM05D009623 ORTHO05D011251 3.6e-15 84.7 84 59.5
Aa31LG5G5840 Aethionema arabicum HOM05D009623 ORTHO05D011251 5.2e-14 80.9 86 57.0
THA.LOC109116767 Tarenaya hassleriana HOM05D009623 ORTHO05D011251 1.5e-13 79.3 84 54.8
Potri.013G119100 Populus trichocarpa HOM05D017147 ORTHO05D011251 1.6e-07 59.3 84 41.7
Potri.019G091100 Populus trichocarpa HOM05D017147 ORTHO05D011251 5.2e-06 54.3 84 36.9


User provided reference genes

Program Settings